Fungal Genomics

General Properties

Protein ID	Ophcf2|05912
Gene name
Location	scaffold_07:116928..118458
Strand	-
Gene length (bp)	1530
Transcript length (bp)	1530
Coding sequence length (bp)	1530
Protein length (aa)	510

Overview

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PFAM Domains

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Golgi apparatus	Transmembrane domain	0.2458	0.1931	0.09	0.3063	0.2949	0.2116	0.3505	0.4449	0.5794	0.0144

SignalP

(None)

Transmembrane Domains

Domain #	Start	End	Length
1	133	155	22
2	215	234	19
3	249	271	22
4	300	322	22
5	326	345	19

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
Fungus	Fungus in pure culture	51.24	29.03	73.45
Alive	In ants, during behavior modification	39.98	22.16	57.80
Dead	In ants, recently dead	43.53	24.32	62.74

Differential expression

Label1	Label2	Q-value	Significant difference
Alive	Fungus	0.215087	no
Alive	Dead	0.660724	no
Dead	Fungus	0.435435	no

Orthologs

Orthofinder run ID	4
Orthogroup	813
Change Orthofinder run	4: Insect Pathogens

Species	Protein ID
Ophiocordyceps australis 1348a (Ghana)	OphauG2|2618
Ophiocordyceps australis map64 (Brazil)	OphauB2|4752
Ophiocordyceps camponoti-floridani	Ophcf2|05912 (this protein)
Ophiocordyceps camponoti-rufipedis	Ophun1|5785
Ophiocordyceps kimflemingae	Ophio5|4839
Ophiocordyceps subramaniannii	Hirsu2|3742
Ophiocordyceps subramaniannii	Hirsu2|4684

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2|05912 MTLQEQQCIHEGRCASMADGGGVLGRDTGEEGFKVEDAVVAVANDGDGDDDEDDDDDDDDDDDDDDRDEDDQDES NDDKSTRVRLTRSSPSSPFRLPPATRLENNLPFAVGLLELANAGDFAANVWNQIPVPLYAMILMALGGTLALIMS IVALYDVRRAWANVRFLRSQRRKLHRRRRRLPSSALDSSFWSASLLAMSFRELWSEVINRLAMDGLMGAGALLIA TGTYMAMGGGDESVFNVSNILSGYLGNTPLALFALVNSSWAMFLAWTAQSHVRAVGRRCLSPATVQLVTRRSRCV QIFSAVNGSAAVVGGVGSMLTATKWWAYLLLAPVVISSIFCNVWWRRRVGYTRSRARLSSATSLESHLEFASWAA KTIRECKKKERNPPLTTIITGSATDDTAHLLRWFRRHDLLPDFCVRLLAYPILYDALVSDPQAKELVLDINDLLA LPSALHPRLRDVADECFAAVGVEHFRHRVRHLAELLGTYCTVAARAPSDEEVAEKEMGS*
Coding	>Ophcf2|05912 ATGACGCTACAGGAGCAGCAGTGCATCCACGAAGGGCGCTGCGCCTCCATGGCAGACGGGGGGGGTGTGCTGGGT CGAGACACGGGGGAGGAGGGCTTCAAGGTGGAGGATGCGGTTGTTGCTGTTGCGAATGACGGGGATGGCGACGAC GACGAAGACGACGACGACGACGACGATGACGATGACGACGATGACGACCGAGACGAAGACGACCAAGATGAATCC AACGACGATAAATCAACCCGCGTCCGCCTCACCCGATCCTCCCCATCCTCACCCTTCCGCCTCCCCCCAGCAACC CGCCTAGAAAACAACCTCCCCTTCGCCGTCGGCCTCCTCGAGCTCGCCAACGCGGGCGACTTCGCGGCCAACGTA TGGAACCAAATCCCCGTCCCCCTCTACGCCATGATCCTAATGGCCCTCGGCGGAACCCTCGCCCTGATAATGAGC ATCGTCGCCCTCTACGACGTCCGCCGCGCCTGGGCCAACGTCCGCTTCCTACGAAGCCAGCGCCGGAAACTTCAT CGCCGACGCAGACGCCTCCCTTCTTCCGCGCTTGATTCGAGCTTCTGGTCGGCTTCGCTTTTGGCAATGTCCTTT CGTGAGCTTTGGAGCGAGGTCATCAATAGGCTCGCTATGGATGGCCTCATGGGTGCCGGCGCTCTGCTCATCGCT ACGGGCACGTACATGGCCATGGGGGGAGGCGACGAAAGCGTCTTCAACGTAAGCAACATCCTATCCGGATACCTG GGCAACACCCCCCTCGCCCTCTTCGCCCTCGTCAACTCCTCGTGGGCCATGTTCCTCGCCTGGACCGCACAGTCG CACGTCCGCGCCGTTGGAAGACGATGCCTCTCCCCCGCTACCGTCCAGCTCGTCACCCGACGAAGCCGCTGCGTG CAAATCTTCTCCGCCGTCAATGGTTCCGCCGCTGTTGTTGGGGGCGTGGGCTCTATGCTGACGGCTACCAAGTGG TGGGCCTACCTTCTTCTCGCCCCCGTCGTCATCTCCAGCATCTTCTGCAACGTCTGGTGGAGGAGGAGAGTAGGA TATACCCGTTCACGAGCGCGTCTCTCGTCCGCGACCTCTCTAGAATCCCACCTCGAATTCGCCTCCTGGGCCGCA AAAACCATCCGAGAATGCAAGAAGAAAGAACGAAACCCCCCCCTAACAACCATCATCACCGGCTCCGCAACAGAC GACACAGCCCACCTCCTCCGCTGGTTCCGCCGCCACGACCTCCTCCCCGATTTCTGCGTCCGTCTCCTCGCCTAC CCCATCCTCTACGATGCGCTCGTCTCCGATCCCCAGGCGAAAGAACTCGTCCTCGACATAAACGATTTACTGGCG CTTCCGTCTGCACTGCATCCGCGGTTGCGTGACGTGGCGGACGAGTGCTTCGCTGCCGTCGGGGTGGAACATTTC CGTCATCGGGTGAGGCATCTTGCCGAGTTGCTGGGGACGTATTGCACTGTTGCTGCGAGGGCGCCTTCGGATGAG GAGGTTGCCGAAAAGGAGATGGGTAGTTGA
Transcript	>Ophcf2|05912 ATGACGCTACAGGAGCAGCAGTGCATCCACGAAGGGCGCTGCGCCTCCATGGCAGACGGGGGGGGTGTGCTGGGT CGAGACACGGGGGAGGAGGGCTTCAAGGTGGAGGATGCGGTTGTTGCTGTTGCGAATGACGGGGATGGCGACGAC GACGAAGACGACGACGACGACGACGATGACGATGACGACGATGACGACCGAGACGAAGACGACCAAGATGAATCC AACGACGATAAATCAACCCGCGTCCGCCTCACCCGATCCTCCCCATCCTCACCCTTCCGCCTCCCCCCAGCAACC CGCCTAGAAAACAACCTCCCCTTCGCCGTCGGCCTCCTCGAGCTCGCCAACGCGGGCGACTTCGCGGCCAACGTA TGGAACCAAATCCCCGTCCCCCTCTACGCCATGATCCTAATGGCCCTCGGCGGAACCCTCGCCCTGATAATGAGC ATCGTCGCCCTCTACGACGTCCGCCGCGCCTGGGCCAACGTCCGCTTCCTACGAAGCCAGCGCCGGAAACTTCAT CGCCGACGCAGACGCCTCCCTTCTTCCGCGCTTGATTCGAGCTTCTGGTCGGCTTCGCTTTTGGCAATGTCCTTT CGTGAGCTTTGGAGCGAGGTCATCAATAGGCTCGCTATGGATGGCCTCATGGGTGCCGGCGCTCTGCTCATCGCT ACGGGCACGTACATGGCCATGGGGGGAGGCGACGAAAGCGTCTTCAACGTAAGCAACATCCTATCCGGATACCTG GGCAACACCCCCCTCGCCCTCTTCGCCCTCGTCAACTCCTCGTGGGCCATGTTCCTCGCCTGGACCGCACAGTCG CACGTCCGCGCCGTTGGAAGACGATGCCTCTCCCCCGCTACCGTCCAGCTCGTCACCCGACGAAGCCGCTGCGTG CAAATCTTCTCCGCCGTCAATGGTTCCGCCGCTGTTGTTGGGGGCGTGGGCTCTATGCTGACGGCTACCAAGTGG TGGGCCTACCTTCTTCTCGCCCCCGTCGTCATCTCCAGCATCTTCTGCAACGTCTGGTGGAGGAGGAGAGTAGGA TATACCCGTTCACGAGCGCGTCTCTCGTCCGCGACCTCTCTAGAATCCCACCTCGAATTCGCCTCCTGGGCCGCA AAAACCATCCGAGAATGCAAGAAGAAAGAACGAAACCCCCCCCTAACAACCATCATCACCGGCTCCGCAACAGAC GACACAGCCCACCTCCTCCGCTGGTTCCGCCGCCACGACCTCCTCCCCGATTTCTGCGTCCGTCTCCTCGCCTAC CCCATCCTCTACGATGCGCTCGTCTCCGATCCCCAGGCGAAAGAACTCGTCCTCGACATAAACGATTTACTGGCG CTTCCGTCTGCACTGCATCCGCGGTTGCGTGACGTGGCGGACGAGTGCTTCGCTGCCGTCGGGGTGGAACATTTC CGTCATCGGGTGAGGCATCTTGCCGAGTTGCTGGGGACGTATTGCACTGTTGCTGCGAGGGCGCCTTCGGATGAG GAGGTTGCCGAAAAGGAGATGGGTAGTTGA
Gene	>Ophcf2|05912 ATGACGCTACAGGAGCAGCAGTGCATCCACGAAGGGCGCTGCGCCTCCATGGCAGACGGGGGGGGTGTGCTGGGT CGAGACACGGGGGAGGAGGGCTTCAAGGTGGAGGATGCGGTTGTTGCTGTTGCGAATGACGGGGATGGCGACGAC GACGAAGACGACGACGACGACGACGATGACGATGACGACGATGACGACCGAGACGAAGACGACCAAGATGAATCC AACGACGATAAATCAACCCGCGTCCGCCTCACCCGATCCTCCCCATCCTCACCCTTCCGCCTCCCCCCAGCAACC CGCCTAGAAAACAACCTCCCCTTCGCCGTCGGCCTCCTCGAGCTCGCCAACGCGGGCGACTTCGCGGCCAACGTA TGGAACCAAATCCCCGTCCCCCTCTACGCCATGATCCTAATGGCCCTCGGCGGAACCCTCGCCCTGATAATGAGC ATCGTCGCCCTCTACGACGTCCGCCGCGCCTGGGCCAACGTCCGCTTCCTACGAAGCCAGCGCCGGAAACTTCAT CGCCGACGCAGACGCCTCCCTTCTTCCGCGCTTGATTCGAGCTTCTGGTCGGCTTCGCTTTTGGCAATGTCCTTT CGTGAGCTTTGGAGCGAGGTCATCAATAGGCTCGCTATGGATGGCCTCATGGGTGCCGGCGCTCTGCTCATCGCT ACGGGCACGTACATGGCCATGGGGGGAGGCGACGAAAGCGTCTTCAACGTAAGCAACATCCTATCCGGATACCTG GGCAACACCCCCCTCGCCCTCTTCGCCCTCGTCAACTCCTCGTGGGCCATGTTCCTCGCCTGGACCGCACAGTCG CACGTCCGCGCCGTTGGAAGACGATGCCTCTCCCCCGCTACCGTCCAGCTCGTCACCCGACGAAGCCGCTGCGTG CAAATCTTCTCCGCCGTCAATGGTTCCGCCGCTGTTGTTGGGGGCGTGGGCTCTATGCTGACGGCTACCAAGTGG TGGGCCTACCTTCTTCTCGCCCCCGTCGTCATCTCCAGCATCTTCTGCAACGTCTGGTGGAGGAGGAGAGTAGGA TATACCCGTTCACGAGCGCGTCTCTCGTCCGCGACCTCTCTAGAATCCCACCTCGAATTCGCCTCCTGGGCCGCA AAAACCATCCGAGAATGCAAGAAGAAAGAACGAAACCCCCCCCTAACAACCATCATCACCGGCTCCGCAACAGAC GACACAGCCCACCTCCTCCGCTGGTTCCGCCGCCACGACCTCCTCCCCGATTTCTGCGTCCGTCTCCTCGCCTAC CCCATCCTCTACGATGCGCTCGTCTCCGATCCCCAGGCGAAAGAACTCGTCCTCGACATAAACGATTTACTGGCG CTTCCGTCTGCACTGCATCCGCGGTTGCGTGACGTGGCGGACGAGTGCTTCGCTGCCGTCGGGGTGGAACATTTC CGTCATCGGGTGAGGCATCTTGCCGAGTTGCTGGGGACGTATTGCACTGTTGCTGCGAGGGCGCCTTCGGATGAG GAGGTTGCCGAAAAGGAGATGGGTAGTTGA