Protein ID | Ophcf2|05912 |
Gene name | |
Location | scaffold_07:116928..118458 |
Strand | - |
Gene length (bp) | 1530 |
Transcript length (bp) | 1530 |
Coding sequence length (bp) | 1530 |
Protein length (aa) | 510 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 26 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 133 | 155 | 22 |
2 | 215 | 234 | 19 |
3 | 249 | 271 | 22 |
4 | 300 | 322 | 22 |
5 | 326 | 345 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|05912 MTLQEQQCIHEGRCASMADGGGVLGRDTGEEGFKVEDAVVAVANDGDGDDDEDDDDDDDDDDDDDDRDEDDQDES NDDKSTRVRLTRSSPSSPFRLPPATRLENNLPFAVGLLELANAGDFAANVWNQIPVPLYAMILMALGGTLALIMS IVALYDVRRAWANVRFLRSQRRKLHRRRRRLPSSALDSSFWSASLLAMSFRELWSEVINRLAMDGLMGAGALLIA TGTYMAMGGGDESVFNVSNILSGYLGNTPLALFALVNSSWAMFLAWTAQSHVRAVGRRCLSPATVQLVTRRSRCV QIFSAVNGSAAVVGGVGSMLTATKWWAYLLLAPVVISSIFCNVWWRRRVGYTRSRARLSSATSLESHLEFASWAA KTIRECKKKERNPPLTTIITGSATDDTAHLLRWFRRHDLLPDFCVRLLAYPILYDALVSDPQAKELVLDINDLLA LPSALHPRLRDVADECFAAVGVEHFRHRVRHLAELLGTYCTVAARAPSDEEVAEKEMGS* |
Coding | >Ophcf2|05912 ATGACGCTACAGGAGCAGCAGTGCATCCACGAAGGGCGCTGCGCCTCCATGGCAGACGGGGGGGGTGTGCTGGGT CGAGACACGGGGGAGGAGGGCTTCAAGGTGGAGGATGCGGTTGTTGCTGTTGCGAATGACGGGGATGGCGACGAC GACGAAGACGACGACGACGACGACGATGACGATGACGACGATGACGACCGAGACGAAGACGACCAAGATGAATCC AACGACGATAAATCAACCCGCGTCCGCCTCACCCGATCCTCCCCATCCTCACCCTTCCGCCTCCCCCCAGCAACC CGCCTAGAAAACAACCTCCCCTTCGCCGTCGGCCTCCTCGAGCTCGCCAACGCGGGCGACTTCGCGGCCAACGTA TGGAACCAAATCCCCGTCCCCCTCTACGCCATGATCCTAATGGCCCTCGGCGGAACCCTCGCCCTGATAATGAGC ATCGTCGCCCTCTACGACGTCCGCCGCGCCTGGGCCAACGTCCGCTTCCTACGAAGCCAGCGCCGGAAACTTCAT CGCCGACGCAGACGCCTCCCTTCTTCCGCGCTTGATTCGAGCTTCTGGTCGGCTTCGCTTTTGGCAATGTCCTTT CGTGAGCTTTGGAGCGAGGTCATCAATAGGCTCGCTATGGATGGCCTCATGGGTGCCGGCGCTCTGCTCATCGCT ACGGGCACGTACATGGCCATGGGGGGAGGCGACGAAAGCGTCTTCAACGTAAGCAACATCCTATCCGGATACCTG GGCAACACCCCCCTCGCCCTCTTCGCCCTCGTCAACTCCTCGTGGGCCATGTTCCTCGCCTGGACCGCACAGTCG CACGTCCGCGCCGTTGGAAGACGATGCCTCTCCCCCGCTACCGTCCAGCTCGTCACCCGACGAAGCCGCTGCGTG CAAATCTTCTCCGCCGTCAATGGTTCCGCCGCTGTTGTTGGGGGCGTGGGCTCTATGCTGACGGCTACCAAGTGG TGGGCCTACCTTCTTCTCGCCCCCGTCGTCATCTCCAGCATCTTCTGCAACGTCTGGTGGAGGAGGAGAGTAGGA TATACCCGTTCACGAGCGCGTCTCTCGTCCGCGACCTCTCTAGAATCCCACCTCGAATTCGCCTCCTGGGCCGCA AAAACCATCCGAGAATGCAAGAAGAAAGAACGAAACCCCCCCCTAACAACCATCATCACCGGCTCCGCAACAGAC GACACAGCCCACCTCCTCCGCTGGTTCCGCCGCCACGACCTCCTCCCCGATTTCTGCGTCCGTCTCCTCGCCTAC CCCATCCTCTACGATGCGCTCGTCTCCGATCCCCAGGCGAAAGAACTCGTCCTCGACATAAACGATTTACTGGCG CTTCCGTCTGCACTGCATCCGCGGTTGCGTGACGTGGCGGACGAGTGCTTCGCTGCCGTCGGGGTGGAACATTTC CGTCATCGGGTGAGGCATCTTGCCGAGTTGCTGGGGACGTATTGCACTGTTGCTGCGAGGGCGCCTTCGGATGAG GAGGTTGCCGAAAAGGAGATGGGTAGTTGA |
Transcript | >Ophcf2|05912 ATGACGCTACAGGAGCAGCAGTGCATCCACGAAGGGCGCTGCGCCTCCATGGCAGACGGGGGGGGTGTGCTGGGT CGAGACACGGGGGAGGAGGGCTTCAAGGTGGAGGATGCGGTTGTTGCTGTTGCGAATGACGGGGATGGCGACGAC GACGAAGACGACGACGACGACGACGATGACGATGACGACGATGACGACCGAGACGAAGACGACCAAGATGAATCC AACGACGATAAATCAACCCGCGTCCGCCTCACCCGATCCTCCCCATCCTCACCCTTCCGCCTCCCCCCAGCAACC CGCCTAGAAAACAACCTCCCCTTCGCCGTCGGCCTCCTCGAGCTCGCCAACGCGGGCGACTTCGCGGCCAACGTA TGGAACCAAATCCCCGTCCCCCTCTACGCCATGATCCTAATGGCCCTCGGCGGAACCCTCGCCCTGATAATGAGC ATCGTCGCCCTCTACGACGTCCGCCGCGCCTGGGCCAACGTCCGCTTCCTACGAAGCCAGCGCCGGAAACTTCAT CGCCGACGCAGACGCCTCCCTTCTTCCGCGCTTGATTCGAGCTTCTGGTCGGCTTCGCTTTTGGCAATGTCCTTT CGTGAGCTTTGGAGCGAGGTCATCAATAGGCTCGCTATGGATGGCCTCATGGGTGCCGGCGCTCTGCTCATCGCT ACGGGCACGTACATGGCCATGGGGGGAGGCGACGAAAGCGTCTTCAACGTAAGCAACATCCTATCCGGATACCTG GGCAACACCCCCCTCGCCCTCTTCGCCCTCGTCAACTCCTCGTGGGCCATGTTCCTCGCCTGGACCGCACAGTCG CACGTCCGCGCCGTTGGAAGACGATGCCTCTCCCCCGCTACCGTCCAGCTCGTCACCCGACGAAGCCGCTGCGTG CAAATCTTCTCCGCCGTCAATGGTTCCGCCGCTGTTGTTGGGGGCGTGGGCTCTATGCTGACGGCTACCAAGTGG TGGGCCTACCTTCTTCTCGCCCCCGTCGTCATCTCCAGCATCTTCTGCAACGTCTGGTGGAGGAGGAGAGTAGGA TATACCCGTTCACGAGCGCGTCTCTCGTCCGCGACCTCTCTAGAATCCCACCTCGAATTCGCCTCCTGGGCCGCA AAAACCATCCGAGAATGCAAGAAGAAAGAACGAAACCCCCCCCTAACAACCATCATCACCGGCTCCGCAACAGAC GACACAGCCCACCTCCTCCGCTGGTTCCGCCGCCACGACCTCCTCCCCGATTTCTGCGTCCGTCTCCTCGCCTAC CCCATCCTCTACGATGCGCTCGTCTCCGATCCCCAGGCGAAAGAACTCGTCCTCGACATAAACGATTTACTGGCG CTTCCGTCTGCACTGCATCCGCGGTTGCGTGACGTGGCGGACGAGTGCTTCGCTGCCGTCGGGGTGGAACATTTC CGTCATCGGGTGAGGCATCTTGCCGAGTTGCTGGGGACGTATTGCACTGTTGCTGCGAGGGCGCCTTCGGATGAG GAGGTTGCCGAAAAGGAGATGGGTAGTTGA |
Gene | >Ophcf2|05912 ATGACGCTACAGGAGCAGCAGTGCATCCACGAAGGGCGCTGCGCCTCCATGGCAGACGGGGGGGGTGTGCTGGGT CGAGACACGGGGGAGGAGGGCTTCAAGGTGGAGGATGCGGTTGTTGCTGTTGCGAATGACGGGGATGGCGACGAC GACGAAGACGACGACGACGACGACGATGACGATGACGACGATGACGACCGAGACGAAGACGACCAAGATGAATCC AACGACGATAAATCAACCCGCGTCCGCCTCACCCGATCCTCCCCATCCTCACCCTTCCGCCTCCCCCCAGCAACC CGCCTAGAAAACAACCTCCCCTTCGCCGTCGGCCTCCTCGAGCTCGCCAACGCGGGCGACTTCGCGGCCAACGTA TGGAACCAAATCCCCGTCCCCCTCTACGCCATGATCCTAATGGCCCTCGGCGGAACCCTCGCCCTGATAATGAGC ATCGTCGCCCTCTACGACGTCCGCCGCGCCTGGGCCAACGTCCGCTTCCTACGAAGCCAGCGCCGGAAACTTCAT CGCCGACGCAGACGCCTCCCTTCTTCCGCGCTTGATTCGAGCTTCTGGTCGGCTTCGCTTTTGGCAATGTCCTTT CGTGAGCTTTGGAGCGAGGTCATCAATAGGCTCGCTATGGATGGCCTCATGGGTGCCGGCGCTCTGCTCATCGCT ACGGGCACGTACATGGCCATGGGGGGAGGCGACGAAAGCGTCTTCAACGTAAGCAACATCCTATCCGGATACCTG GGCAACACCCCCCTCGCCCTCTTCGCCCTCGTCAACTCCTCGTGGGCCATGTTCCTCGCCTGGACCGCACAGTCG CACGTCCGCGCCGTTGGAAGACGATGCCTCTCCCCCGCTACCGTCCAGCTCGTCACCCGACGAAGCCGCTGCGTG CAAATCTTCTCCGCCGTCAATGGTTCCGCCGCTGTTGTTGGGGGCGTGGGCTCTATGCTGACGGCTACCAAGTGG TGGGCCTACCTTCTTCTCGCCCCCGTCGTCATCTCCAGCATCTTCTGCAACGTCTGGTGGAGGAGGAGAGTAGGA TATACCCGTTCACGAGCGCGTCTCTCGTCCGCGACCTCTCTAGAATCCCACCTCGAATTCGCCTCCTGGGCCGCA AAAACCATCCGAGAATGCAAGAAGAAAGAACGAAACCCCCCCCTAACAACCATCATCACCGGCTCCGCAACAGAC GACACAGCCCACCTCCTCCGCTGGTTCCGCCGCCACGACCTCCTCCCCGATTTCTGCGTCCGTCTCCTCGCCTAC CCCATCCTCTACGATGCGCTCGTCTCCGATCCCCAGGCGAAAGAACTCGTCCTCGACATAAACGATTTACTGGCG CTTCCGTCTGCACTGCATCCGCGGTTGCGTGACGTGGCGGACGAGTGCTTCGCTGCCGTCGGGGTGGAACATTTC CGTCATCGGGTGAGGCATCTTGCCGAGTTGCTGGGGACGTATTGCACTGTTGCTGCGAGGGCGCCTTCGGATGAG GAGGTTGCCGAAAAGGAGATGGGTAGTTGA |