© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|05909 |
| Gene name | |
| Location | scaffold_07:107059..109084 |
| Strand | - |
| Gene length (bp) | 2025 |
| Transcript length (bp) | 1851 |
| Coding sequence length (bp) | 1851 |
| Protein length (aa) | 617 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.2E-11 | 49 | 486 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051179 | localization | No |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0051234 | establishment of localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 56 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 130 | 152 | 22 |
| 2 | 165 | 187 | 22 |
| 3 | 197 | 219 | 22 |
| 4 | 269 | 288 | 19 |
| 5 | 298 | 320 | 22 |
| 6 | 340 | 362 | 22 |
| 7 | 377 | 399 | 22 |
| 8 | 406 | 428 | 22 |
| 9 | 433 | 455 | 22 |
| 10 | 476 | 498 | 22 |
| 11 | 546 | 568 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Fungus | Fungus in pure culture | 14.28 | 6.83 | 21.73 |
| Alive | In ants, during behavior modification | 19.99 | 10.01 | 29.97 |
| Dead | In ants, recently dead | 27.36 | 14.54 | 40.19 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Alive | Fungus | 0.135216 | no |
| Alive | Dead | 0.094549 | no |
| Dead | Fungus | 0.002117 | yes |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|05909 MRHLDEQTPLLGRRSKNPEPSSSGVARADAAFASLSPLHRAWLFGGIFLVGCAYGLESQVRATYQPYATSSFSLH PYLSTINVLRSVVAVAVQPTAAKVADVVGRFEVVAASTACYVVGMAIEASAASVYAFCAGGLVYQVGYTAIVLVL EVLVADVSSMRARVFFSYVPALPFVVNAWVGGALASAILSVSSWRWGIAMWCLVYPLASLPLLIALYLLDRRRAS PSTTAAVKSASGGSVTSSGSGSGPDSETRSETPSDSLLQQLDIVGLFGLVAALSLVLAPLTVAGGSEADVSRWRS PLVLAPLAVGLVLLPLFALWERRGARTPLVPMRLLADRGVWSALAVRGLLNLAWSVQGNYLYTVLVVAFDFSVEA ATRILSLFSFCGVVSGVVVGMIVYRLRRLKAVIVVGTCLFTAGLAVLYFFPGGAEASSAAGVVTGQVLLGLASGL FAYPTQASIQASATRDHVAVMTGLYLSLYNIGSALGTSLSGALWSAALPPALSANLAFQPNETLARATYHSPFDV VARYPVGTAVRTAIVVSYCHVQRLLCLAGIVACLPMIAFALALRNPRLSKRQVQPDAVAPLPPEPITTTATTTTT TTTTTTTEDPSTIVDG* |
| Coding | >Ophcf2|05909 ATGCGCCATCTTGACGAGCAGACGCCCCTGCTGGGCCGACGGTCCAAGAATCCAGAACCGTCATCGTCGGGCGTC GCCCGCGCCGACGCCGCCTTCGCCAGCCTCTCTCCCCTTCATCGAGCCTGGCTCTTCGGCGGCATCTTTCTCGTC GGTTGCGCCTACGGCCTCGAGAGCCAAGTCCGAGCTACATACCAGCCGTACGCGACGTCCAGCTTCTCGCTGCAT CCCTACCTGTCAACCATCAACGTTCTGCGCAGCGTCGTCGCCGTCGCCGTTCAGCCGACAGCGGCAAAGGTGGCT GATGTCGTGGGCCGCTTCGAGGTCGTGGCCGCCTCTACGGCCTGCTATGTGGTCGGCATGGCTATAGAGGCCTCG GCCGCCTCCGTCTACGCCTTTTGCGCTGGCGGTTTGGTCTATCAGGTCGGCTATACTGCCATCGTTCTCGTTCTC GAAGTGCTCGTCGCCGACGTCTCGTCCATGCGCGCTCGCGTCTTCTTTAGCTACGTGCCGGCTCTCCCCTTTGTC GTCAACGCCTGGGTCGGCGGCGCCCTTGCTTCTGCCATCTTGTCCGTCTCGTCGTGGCGCTGGGGCATCGCCATG TGGTGTCTCGTCTATCCGCTTGCCTCGCTACCGCTTCTCATCGCTCTTTATCTGCTCGACCGTCGTCGCGCGTCC CCTTCGACCACGGCAGCCGTCAAGTCCGCCTCCGGTGGATCCGTTACTAGCTCCGGCTCCGGTTCCGGGCCCGAC TCCGAGACCCGCTCCGAGACCCCTTCCGACTCCCTCCTGCAGCAGCTCGATATTGTCGGTCTCTTCGGTCTCGTC GCCGCCCTTTCTCTAGTCCTGGCGCCTCTGACAGTGGCCGGTGGCAGCGAAGCCGACGTTTCCCGCTGGAGAAGC CCCCTTGTGCTGGCTCCTCTCGCCGTCGGCCTCGTCCTGCTGCCGCTCTTTGCCCTGTGGGAGCGTCGCGGTGCC CGGACGCCGCTCGTGCCGATGCGGCTACTGGCCGATCGCGGCGTCTGGTCAGCACTGGCGGTCCGCGGCTTGCTC AACCTCGCGTGGTCGGTACAGGGCAACTATCTGTACACGGTTCTCGTCGTCGCCTTTGACTTCTCCGTCGAGGCC GCCACCCGAATCCTCTCCCTCTTCTCCTTCTGTGGCGTCGTCAGCGGCGTCGTCGTCGGCATGATTGTCTATCGT CTTCGTCGACTCAAGGCCGTCATCGTCGTGGGAACCTGTCTCTTCACCGCCGGCCTCGCCGTCCTCTACTTCTTC CCCGGAGGCGCCGAAGCGTCGTCGGCAGCCGGCGTCGTGACCGGTCAGGTCCTCCTCGGCCTCGCCAGCGGCCTC TTCGCCTACCCGACTCAGGCGTCGATCCAAGCATCAGCAACTCGCGACCACGTGGCCGTCATGACAGGTCTCTAT CTCTCCCTCTACAACATCGGCTCCGCGCTCGGCACCAGCCTCTCAGGCGCCCTCTGGTCCGCCGCCCTTCCGCCA GCCCTCTCGGCGAATCTGGCTTTTCAGCCCAACGAGACATTGGCTCGTGCCACATACCACTCCCCCTTTGACGTA GTCGCCCGTTACCCTGTCGGGACTGCCGTTCGTACCGCCATCGTCGTCAGCTACTGTCATGTTCAGCGCCTTCTC TGCCTCGCCGGCATCGTCGCTTGTCTTCCCATGATTGCCTTTGCACTGGCCCTGAGGAATCCGCGCCTGTCGAAG CGGCAGGTTCAGCCGGATGCTGTGGCCCCGCTGCCGCCGGAGCCGATAACGACGACGGCGACGACGACGACGACG ACGACGACGACGACGACGACCGAAGATCCTTCTACCATCGTGGACGGCTGA |
| Transcript | >Ophcf2|05909 ATGCGCCATCTTGACGAGCAGACGCCCCTGCTGGGCCGACGGTCCAAGAATCCAGAACCGTCATCGTCGGGCGTC GCCCGCGCCGACGCCGCCTTCGCCAGCCTCTCTCCCCTTCATCGAGCCTGGCTCTTCGGCGGCATCTTTCTCGTC GGTTGCGCCTACGGCCTCGAGAGCCAAGTCCGAGCTACATACCAGCCGTACGCGACGTCCAGCTTCTCGCTGCAT CCCTACCTGTCAACCATCAACGTTCTGCGCAGCGTCGTCGCCGTCGCCGTTCAGCCGACAGCGGCAAAGGTGGCT GATGTCGTGGGCCGCTTCGAGGTCGTGGCCGCCTCTACGGCCTGCTATGTGGTCGGCATGGCTATAGAGGCCTCG GCCGCCTCCGTCTACGCCTTTTGCGCTGGCGGTTTGGTCTATCAGGTCGGCTATACTGCCATCGTTCTCGTTCTC GAAGTGCTCGTCGCCGACGTCTCGTCCATGCGCGCTCGCGTCTTCTTTAGCTACGTGCCGGCTCTCCCCTTTGTC GTCAACGCCTGGGTCGGCGGCGCCCTTGCTTCTGCCATCTTGTCCGTCTCGTCGTGGCGCTGGGGCATCGCCATG TGGTGTCTCGTCTATCCGCTTGCCTCGCTACCGCTTCTCATCGCTCTTTATCTGCTCGACCGTCGTCGCGCGTCC CCTTCGACCACGGCAGCCGTCAAGTCCGCCTCCGGTGGATCCGTTACTAGCTCCGGCTCCGGTTCCGGGCCCGAC TCCGAGACCCGCTCCGAGACCCCTTCCGACTCCCTCCTGCAGCAGCTCGATATTGTCGGTCTCTTCGGTCTCGTC GCCGCCCTTTCTCTAGTCCTGGCGCCTCTGACAGTGGCCGGTGGCAGCGAAGCCGACGTTTCCCGCTGGAGAAGC CCCCTTGTGCTGGCTCCTCTCGCCGTCGGCCTCGTCCTGCTGCCGCTCTTTGCCCTGTGGGAGCGTCGCGGTGCC CGGACGCCGCTCGTGCCGATGCGGCTACTGGCCGATCGCGGCGTCTGGTCAGCACTGGCGGTCCGCGGCTTGCTC AACCTCGCGTGGTCGGTACAGGGCAACTATCTGTACACGGTTCTCGTCGTCGCCTTTGACTTCTCCGTCGAGGCC GCCACCCGAATCCTCTCCCTCTTCTCCTTCTGTGGCGTCGTCAGCGGCGTCGTCGTCGGCATGATTGTCTATCGT CTTCGTCGACTCAAGGCCGTCATCGTCGTGGGAACCTGTCTCTTCACCGCCGGCCTCGCCGTCCTCTACTTCTTC CCCGGAGGCGCCGAAGCGTCGTCGGCAGCCGGCGTCGTGACCGGTCAGGTCCTCCTCGGCCTCGCCAGCGGCCTC TTCGCCTACCCGACTCAGGCGTCGATCCAAGCATCAGCAACTCGCGACCACGTGGCCGTCATGACAGGTCTCTAT CTCTCCCTCTACAACATCGGCTCCGCGCTCGGCACCAGCCTCTCAGGCGCCCTCTGGTCCGCCGCCCTTCCGCCA GCCCTCTCGGCGAATCTGGCTTTTCAGCCCAACGAGACATTGGCTCGTGCCACATACCACTCCCCCTTTGACGTA GTCGCCCGTTACCCTGTCGGGACTGCCGTTCGTACCGCCATCGTCGTCAGCTACTGTCATGTTCAGCGCCTTCTC TGCCTCGCCGGCATCGTCGCTTGTCTTCCCATGATTGCCTTTGCACTGGCCCTGAGGAATCCGCGCCTGTCGAAG CGGCAGGTTCAGCCGGATGCTGTGGCCCCGCTGCCGCCGGAGCCGATAACGACGACGGCGACGACGACGACGACG ACGACGACGACGACGACGACCGAAGATCCTTCTACCATCGTGGACGGCTGA |
| Gene | >Ophcf2|05909 ATGCGCCATCTTGACGAGCAGACGCCCCTGCTGGGCCGACGGTCCAAGAATCCAGAACCGTCATCGTCGGGTACG TCATCAGAATCATCGTCCTCATCATCATCCGAGGACCCATTGTCGATAGCCATATTTCCCGAATCCTCCTCATCA GACTCATCGTCATCCTCCTCTTCCTCCACCACCACTTCCTCCTCCTCCTCCTCCTCCTCTCTTCTCGCAAATCAT TCCCTCCAACGCTCCCCAGGCGTCGCCCGCGCCGACGCCGCCTTCGCCAGCCTCTCTCCCCTTCATCGAGCCTGG CTCTTCGGCGGCATCTTTCTCGTCGGTTGCGCCTACGGCCTCGAGAGCCAAGTCCGAGCTACATACCAGCCGTAC GCGACGTCCAGCTTCTCGCTGCATCCCTACCTGTCAACCATCAACGTTCTGCGCAGCGTCGTCGCCGTCGCCGTT CAGCCGACAGCGGCAAAGGTGGCTGATGTCGTGGGCCGCTTCGAGGTCGTGGCCGCCTCTACGGCCTGCTATGTG GTCGGCATGGCTATAGAGGCCTCGGCCGCCTCCGTCTACGCCTTTTGCGCTGGCGGTTTGGTCTATCAGGTCGGC TATACTGCCATCGTTCTCGTTCTCGAAGTGCTCGTCGCCGACGTCTCGTCCATGCGCGCTCGCGTCTTCTTTAGC TACGTGCCGGCTCTCCCCTTTGTCGTCAACGCCTGGGTCGGCGGCGCCCTTGCTTCTGCCATCTTGTCCGTCTCG TCGTGGCGCTGGGGCATCGCCATGTGGTGTCTCGTCTATCCGCTTGCCTCGCTACCGCTTCTCATCGCTCTTTAT CTGCTCGACCGTCGTCGCGCGTCCCCTTCGACCACGGCAGCCGTCAAGTCCGCCTCCGGTGGATCCGTTACTAGC TCCGGCTCCGGTTCCGGGCCCGACTCCGAGACCCGCTCCGAGACCCCTTCCGACTCCCTCCTGCAGCAGCTCGAT ATTGTCGGTCTCTTCGGTCTCGTCGCCGCCCTTTCTCTAGTCCTGGCGCCTCTGACAGTGGCCGGTGGCAGCGAA GCCGACGTTTCCCGCTGGAGAAGCCCCCTTGTGCTGGCTCCTCTCGCCGTCGGCCTCGTCCTGCTGCCGCTCTTT GCCCTGTGGGAGCGTCGCGGTGCCCGGACGCCGCTCGTGCCGATGCGGCTACTGGCCGATCGCGGCGTCTGGTCA GCACTGGCGGTCCGCGGCTTGCTCAACCTCGCGTGGTCGGTACAGGGCAACTATCTGTACACGGTTCTCGTCGTC GCCTTTGACTTCTCCGTCGAGGCCGCCACCCGAATCCTCTCCCTCTTCTCCTTCTGTGGCGTCGTCAGCGGCGTC GTCGTCGGCATGATTGTCTATCGTCTTCGTCGACTCAAGGCCGTCATCGTCGTGGGAACCTGTCTCTTCACCGCC GGCCTCGCCGTCCTCTACTTCTTCCCCGGAGGCGCCGAAGCGTCGTCGGCAGCCGGCGTCGTGACCGGTCAGGTC CTCCTCGGCCTCGCCAGCGGCCTCTTCGCCTACCCGACTCAGGCGTCGATCCAAGCATCAGCAACTCGCGACCAC GTGGCCGTCATGACAGGTCTCTATCTCTCCCTCTACAACATCGGCTCCGCGCTCGGCACCAGCCTCTCAGGCGCC CTCTGGTCCGCCGCCCTTCCGCCAGCCCTCTCGGCGAATCTGGCTTTTCAGCCCAACGAGACATTGGCTCGTGCC ACATACCACTCCCCCTTTGACGTAGTCGCCCGTTACCCTGTCGGGACTGCCGTTCGTACCGCCATCGTCGTCAGC TACTGTCATGTTCAGCGCCTTCTCTGCCTCGCCGGCATCGTCGCTTGTCTTCCCATGATTGCCTTTGCACTGGCC CTGAGGAATCCGCGCCTGTCGAAGCGGCAGGTTCAGCCGGATGCTGTGGCCCCGCTGCCGCCGGAGCCGATAACG ACGACGGCGACGACGACGACGACGACGACGACGACGACGACGACCGAAGATCCTTCTACCATCGTGGACGGCTGA |