Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05809
Gene name
Locationscaffold_06:2307725..2308897
Strand-
Gene length (bp)1172
Transcript length (bp)987
Coding sequence length (bp)987
Protein length (aa) 329

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00153 Mito_carr Mitochondrial carrier protein 3.9E-14 19 96
PF00153 Mito_carr Mitochondrial carrier protein 1.9E-14 129 224
PF00153 Mito_carr Mitochondrial carrier protein 2.5E-06 239 322

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.45

Transmembrane Domains

Domain # Start End Length
1 20 39 19
2 120 142 22
3 239 258 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05809
MPPQPQGAPDSLVWRYRTEIAASSSSVFSTLAAFPLDSVKTRMQTYQYRGFLDCVQHTYRTEKLGGFFRGVTAPM
VSITLVRTVSFSIYQRAKHSYSDWVKRNLGYDILRHVNRPGTYPNFYSVACFGAAGATAGSVITFLACPFELTKL
SAQVSVLLAERAGNCQKSRAVATSYQNKGTLRTMANIVKHRGVLGLYTGFNLHLLRDTLGTAIYFMVYESGKQLG
TTFAGDSPNSNKLAVVAAGGLCGLVSWAIIYPIDSAKSIYQRNSLLRSRGEKVEPAPKIEFFRRHMYRGLGVSMS
RSCLVNAIFFSSFEFIKKRIKDDDRNHT*
Coding >Ophcf2|05809
ATGCCTCCCCAGCCTCAAGGAGCGCCCGATTCCTTGGTTTGGCGTTACCGCACGGAGATAGCCGCCAGTTCGTCG
AGCGTCTTCTCCACGCTCGCTGCCTTTCCGCTTGATAGCGTCAAGACGCGGATGCAGACGTATCAGTACCGCGGT
TTTCTCGACTGTGTTCAGCACACTTACCGCACCGAGAAGCTCGGAGGCTTCTTTAGAGGCGTCACGGCTCCCATG
GTCAGCATCACCCTAGTTCGCACCGTCTCCTTCTCCATCTACCAGCGAGCCAAACACTCCTACTCGGACTGGGTC
AAGCGAAACCTCGGCTACGATATCCTGCGGCACGTCAACCGGCCCGGAACATACCCCAACTTTTACTCGGTAGCT
TGCTTCGGCGCGGCCGGCGCCACAGCCGGATCCGTCATCACCTTCTTGGCCTGCCCCTTTGAGCTGACCAAGCTG
AGCGCCCAGGTCTCTGTTCTCCTGGCCGAGCGCGCGGGTAACTGCCAAAAGAGCCGGGCCGTGGCGACGAGCTAC
CAGAACAAGGGAACGCTGAGGACCATGGCCAATATCGTCAAGCACCGCGGCGTCCTCGGGCTCTACACGGGTTTC
AACCTGCATCTCTTGCGCGACACGCTCGGAACGGCCATCTACTTCATGGTGTACGAGAGCGGTAAGCAGCTGGGC
ACGACGTTTGCCGGTGATAGCCCCAACAGCAATAAGTTGGCCGTGGTGGCTGCCGGCGGACTCTGCGGCCTCGTG
TCGTGGGCCATTATATATCCCATCGACTCTGCCAAGAGCATCTACCAGAGAAACTCGCTCCTCCGGTCTAGAGGG
GAAAAGGTCGAGCCAGCACCGAAGATCGAGTTCTTCAGGCGGCACATGTACCGCGGGCTGGGAGTGTCTATGAGC
CGCTCCTGCCTGGTCAACGCCATCTTCTTCTCCTCGTTCGAGTTCATCAAGAAGCGCATCAAGGACGACGACAGG
AACCACACGTGA
Transcript >Ophcf2|05809
ATGCCTCCCCAGCCTCAAGGAGCGCCCGATTCCTTGGTTTGGCGTTACCGCACGGAGATAGCCGCCAGTTCGTCG
AGCGTCTTCTCCACGCTCGCTGCCTTTCCGCTTGATAGCGTCAAGACGCGGATGCAGACGTATCAGTACCGCGGT
TTTCTCGACTGTGTTCAGCACACTTACCGCACCGAGAAGCTCGGAGGCTTCTTTAGAGGCGTCACGGCTCCCATG
GTCAGCATCACCCTAGTTCGCACCGTCTCCTTCTCCATCTACCAGCGAGCCAAACACTCCTACTCGGACTGGGTC
AAGCGAAACCTCGGCTACGATATCCTGCGGCACGTCAACCGGCCCGGAACATACCCCAACTTTTACTCGGTAGCT
TGCTTCGGCGCGGCCGGCGCCACAGCCGGATCCGTCATCACCTTCTTGGCCTGCCCCTTTGAGCTGACCAAGCTG
AGCGCCCAGGTCTCTGTTCTCCTGGCCGAGCGCGCGGGTAACTGCCAAAAGAGCCGGGCCGTGGCGACGAGCTAC
CAGAACAAGGGAACGCTGAGGACCATGGCCAATATCGTCAAGCACCGCGGCGTCCTCGGGCTCTACACGGGTTTC
AACCTGCATCTCTTGCGCGACACGCTCGGAACGGCCATCTACTTCATGGTGTACGAGAGCGGTAAGCAGCTGGGC
ACGACGTTTGCCGGTGATAGCCCCAACAGCAATAAGTTGGCCGTGGTGGCTGCCGGCGGACTCTGCGGCCTCGTG
TCGTGGGCCATTATATATCCCATCGACTCTGCCAAGAGCATCTACCAGAGAAACTCGCTCCTCCGGTCTAGAGGG
GAAAAGGTCGAGCCAGCACCGAAGATCGAGTTCTTCAGGCGGCACATGTACCGCGGGCTGGGAGTGTCTATGAGC
CGCTCCTGCCTGGTCAACGCCATCTTCTTCTCCTCGTTCGAGTTCATCAAGAAGCGCATCAAGGACGACGACAGG
AACCACACGTGA
Gene >Ophcf2|05809
ATGCCTCCCCAGCCTCAAGGAGCGCCCGATTCCTTGGTTTGGCGTTACCGCACGGAGATAGCCGCCAGTTCGTCG
AGCGTCTTCTCCACGCTCGCTGCCTTTCCGCTTGATAGCGTCAAGACGCGGATGCAGACGTATCAGTACCGCGGT
TTTCTCGACTGTGTTCAGCACACTTACCGCACCGAGAAGCTCGGAGGCTTCTTTAGAGGTGAGTACCATGAAGGA
TTGCTTTCTTCTCGAGATGGCTGTCAACTAACGACAAACCCCCCTCCTAGGCGTCACGGCTCCCATGGTCAGCAT
CACCCTAGTTCGCACCGTCTCCTTCTCCATCTACCAGCGAGCCAAACACTCCTACTCGGACTGGGTCAAGCGAAA
CCTCGGCTACGATATCCTGCGGCACGTCAACCGGCCCGGAACATACCCCAACTTTTACTCGGTAGCTTGCTTCGG
CGCGGCCGGCGCCACAGCCGGATCCGTCATCACCTTCTTGGCCTGCCCCTTTGAGCTGACCAAGCTGAGCGCCCA
GGTCTCTGTTCTCCTGGCCGAGCGCGCGGGTAACTGCCAAAAGAGCCGGGCCGTGGCGACGAGCTACCAGAACAA
GGGAACGCTGAGGACCATGGCCAATATCGTCAAGCACCGCGGCGTCCTCGGGCTCTACACGGGTTTCAACCTGCA
TCTCTGTACGTTGGCTTGTTTGATTTCCTGCTCCAGCTCCTGACGACGAACCGACAGCTAACCATGGTAACAGTG
CGCGACACGCTCGGAACGGCCATCTACTTCATGGTGTACGAGAGCGGTAAGCAGCTGGGCACGACGTTTGCCGGT
GATAGCCCCAACAGCAATAAGTTGGCCGTGGTGGCTGCCGGCGGACTCTGCGGCCTCGTGTCGTGGGCCATTATA
TGTAAGTGTTTCCTGTCCCGTTGTCAGGCCCGACTAACGGCGTGCGCAAAGATCCCATCGACTCTGCCAAGAGCA
TCTACCAGAGAAACTCGCTCCTCCGGTCTAGAGGGGAAAAGGTCGAGCCAGCACCGAAGATCGAGTTCTTCAGGC
GGCACATGTACCGCGGGCTGGGAGTGTCTATGAGCCGCTCCTGCCTGGTCAACGCCATCTTCTTCTCCTCGTTCG
AGTTCATCAAGAAGCGCATCAAGGACGACGACAGGAACCACACGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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