Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05783
Gene name
Locationscaffold_06:2245127..2246237
Strand+
Gene length (bp)1110
Transcript length (bp)1110
Coding sequence length (bp)1110
Protein length (aa) 370

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 138 155 17
2 159 181 22
3 202 221 19
4 225 247 22
5 260 282 22
6 351 368 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05783
MSLRRKPVVPRTPRVISPSPAPSDQDGLEHEYFGPTTRSAVRNRLSTSQTLTKRNEDDSPPRSRTRSRSPMKQPD
APLTGQPSARQPVTNGHLAPPQPLTIGGWSWRDFSRSPSPLGLIPIHRHWRTFVHKHEVPRKALHISIGFFVAWL
YAVGTRVDAVPPYLMAALLPIATTDWLRHRYQSVNRLYVRLLGALMRESEYSGWNGVIFYLLGAWFVLRFFPKDV
GVMSVLLLSWCDTAASTFGRLWGRYTPRIRRGKSLAGSTAAFLVGVGTSYFFYAWLVPTFGPMPGDDGFMFKGTL
SLPQSVRAALGLADQAGRVSGALALGLVSLWSGLVASTSEVVDIFGWDDNLTIPVFSGIGIMSFLKLFG*
Coding >Ophcf2|05783
ATGTCGCTGCGGCGCAAACCTGTCGTGCCTCGCACGCCTCGTGTCATATCGCCTAGTCCTGCGCCTTCGGATCAG
GATGGCTTGGAGCACGAGTATTTCGGTCCCACGACGCGGTCTGCGGTTCGGAATCGCCTCTCGACGTCGCAGACG
CTTACGAAGCGGAACGAAGATGACAGTCCCCCGAGATCCCGCACCAGGAGCCGGTCGCCTATGAAGCAGCCAGAC
GCCCCTTTGACCGGTCAACCGTCTGCCCGACAGCCCGTGACGAATGGTCATCTTGCGCCACCGCAGCCCTTGACG
ATTGGCGGCTGGTCTTGGCGCGATTTCAGCCGCAGCCCGAGCCCGCTGGGCCTCATCCCCATCCATCGCCATTGG
CGGACTTTTGTCCACAAGCACGAGGTGCCACGCAAGGCGCTGCACATCTCCATCGGCTTTTTCGTCGCCTGGCTT
TACGCCGTCGGCACGCGCGTCGACGCCGTGCCACCTTACCTCATGGCAGCCTTGCTGCCCATCGCCACGACAGAC
TGGCTGCGACACAGATATCAGTCCGTCAATAGGCTCTACGTCCGCCTCCTCGGCGCCTTGATGCGCGAGAGCGAG
TACTCGGGCTGGAATGGCGTCATCTTCTATCTCCTCGGCGCATGGTTCGTCCTACGCTTCTTCCCCAAGGATGTT
GGCGTCATGAGCGTCCTGCTGCTCAGCTGGTGCGACACCGCCGCCAGCACCTTTGGTCGCCTCTGGGGACGGTAC
ACGCCGAGGATCCGCCGCGGCAAATCATTGGCCGGATCTACAGCCGCCTTTCTCGTCGGTGTCGGCACCTCGTAC
TTCTTCTACGCTTGGCTCGTTCCCACCTTTGGGCCGATGCCGGGCGACGACGGCTTCATGTTCAAGGGCACCCTG
TCGCTGCCGCAGTCTGTCCGCGCCGCGTTGGGGCTGGCGGATCAGGCGGGTCGGGTATCGGGCGCCCTGGCCCTT
GGACTTGTGAGCCTTTGGTCTGGGCTGGTGGCTTCGACGAGCGAAGTAGTCGACATCTTTGGCTGGGATGATAAC
CTCACGATTCCGGTGTTTAGCGGCATTGGCATCATGAGCTTCCTCAAGTTATTTGGCTGA
Transcript >Ophcf2|05783
ATGTCGCTGCGGCGCAAACCTGTCGTGCCTCGCACGCCTCGTGTCATATCGCCTAGTCCTGCGCCTTCGGATCAG
GATGGCTTGGAGCACGAGTATTTCGGTCCCACGACGCGGTCTGCGGTTCGGAATCGCCTCTCGACGTCGCAGACG
CTTACGAAGCGGAACGAAGATGACAGTCCCCCGAGATCCCGCACCAGGAGCCGGTCGCCTATGAAGCAGCCAGAC
GCCCCTTTGACCGGTCAACCGTCTGCCCGACAGCCCGTGACGAATGGTCATCTTGCGCCACCGCAGCCCTTGACG
ATTGGCGGCTGGTCTTGGCGCGATTTCAGCCGCAGCCCGAGCCCGCTGGGCCTCATCCCCATCCATCGCCATTGG
CGGACTTTTGTCCACAAGCACGAGGTGCCACGCAAGGCGCTGCACATCTCCATCGGCTTTTTCGTCGCCTGGCTT
TACGCCGTCGGCACGCGCGTCGACGCCGTGCCACCTTACCTCATGGCAGCCTTGCTGCCCATCGCCACGACAGAC
TGGCTGCGACACAGATATCAGTCCGTCAATAGGCTCTACGTCCGCCTCCTCGGCGCCTTGATGCGCGAGAGCGAG
TACTCGGGCTGGAATGGCGTCATCTTCTATCTCCTCGGCGCATGGTTCGTCCTACGCTTCTTCCCCAAGGATGTT
GGCGTCATGAGCGTCCTGCTGCTCAGCTGGTGCGACACCGCCGCCAGCACCTTTGGTCGCCTCTGGGGACGGTAC
ACGCCGAGGATCCGCCGCGGCAAATCATTGGCCGGATCTACAGCCGCCTTTCTCGTCGGTGTCGGCACCTCGTAC
TTCTTCTACGCTTGGCTCGTTCCCACCTTTGGGCCGATGCCGGGCGACGACGGCTTCATGTTCAAGGGCACCCTG
TCGCTGCCGCAGTCTGTCCGCGCCGCGTTGGGGCTGGCGGATCAGGCGGGTCGGGTATCGGGCGCCCTGGCCCTT
GGACTTGTGAGCCTTTGGTCTGGGCTGGTGGCTTCGACGAGCGAAGTAGTCGACATCTTTGGCTGGGATGATAAC
CTCACGATTCCGGTGTTTAGCGGCATTGGCATCATGAGCTTCCTCAAGTTATTTGGCTGA
Gene >Ophcf2|05783
ATGTCGCTGCGGCGCAAACCTGTCGTGCCTCGCACGCCTCGTGTCATATCGCCTAGTCCTGCGCCTTCGGATCAG
GATGGCTTGGAGCACGAGTATTTCGGTCCCACGACGCGGTCTGCGGTTCGGAATCGCCTCTCGACGTCGCAGACG
CTTACGAAGCGGAACGAAGATGACAGTCCCCCGAGATCCCGCACCAGGAGCCGGTCGCCTATGAAGCAGCCAGAC
GCCCCTTTGACCGGTCAACCGTCTGCCCGACAGCCCGTGACGAATGGTCATCTTGCGCCACCGCAGCCCTTGACG
ATTGGCGGCTGGTCTTGGCGCGATTTCAGCCGCAGCCCGAGCCCGCTGGGCCTCATCCCCATCCATCGCCATTGG
CGGACTTTTGTCCACAAGCACGAGGTGCCACGCAAGGCGCTGCACATCTCCATCGGCTTTTTCGTCGCCTGGCTT
TACGCCGTCGGCACGCGCGTCGACGCCGTGCCACCTTACCTCATGGCAGCCTTGCTGCCCATCGCCACGACAGAC
TGGCTGCGACACAGATATCAGTCCGTCAATAGGCTCTACGTCCGCCTCCTCGGCGCCTTGATGCGCGAGAGCGAG
TACTCGGGCTGGAATGGCGTCATCTTCTATCTCCTCGGCGCATGGTTCGTCCTACGCTTCTTCCCCAAGGATGTT
GGCGTCATGAGCGTCCTGCTGCTCAGCTGGTGCGACACCGCCGCCAGCACCTTTGGTCGCCTCTGGGGACGGTAC
ACGCCGAGGATCCGCCGCGGCAAATCATTGGCCGGATCTACAGCCGCCTTTCTCGTCGGTGTCGGCACCTCGTAC
TTCTTCTACGCTTGGCTCGTTCCCACCTTTGGGCCGATGCCGGGCGACGACGGCTTCATGTTCAAGGGCACCCTG
TCGCTGCCGCAGTCTGTCCGCGCCGCGTTGGGGCTGGCGGATCAGGCGGGTCGGGTATCGGGCGCCCTGGCCCTT
GGACTTGTGAGCCTTTGGTCTGGGCTGGTGGCTTCGACGAGCGAAGTAGTCGACATCTTTGGCTGGGATGATAAC
CTCACGATTCCGGTGTTTAGCGGCATTGGCATCATGAGCTTCCTCAAGTTATTTGGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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