Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05741
Gene name
Locationscaffold_06:2153526..2154847
Strand+
Gene length (bp)1321
Transcript length (bp)948
Coding sequence length (bp)948
Protein length (aa) 316

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00153 Mito_carr Mitochondrial carrier protein 1.5E-23 14 108
PF00153 Mito_carr Mitochondrial carrier protein 2.2E-24 118 213
PF00153 Mito_carr Mitochondrial carrier protein 2.2E-15 219 306

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 27 0.45

Transmembrane Domains

Domain # Start End Length
1 116 138 22
2 182 204 22
3 219 241 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05741
MSSVEQQKVLGMPPFMADFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLERRFNGITDCFKRTWADEGF
LSLWRGNTANVIRYFPTQALNFAFRDKFKKMFGFKKDRDGYAMWMVGNLASGGAAGATSMLFVYSLDYARTRLAN
DAKNAKKGGERQFNGLIDVYRKTMASDGVAGLYRGFMPSVAGIIVYRGLYFGMYDSFKPVLLTGNLANNFLASFM
LGWCVTTGAGIAAYPLDTIRRRMMMTSGEAVKYKNSFDAARQIIAKNGVKSLFNGAGANILRGVAGAGVLSIYDQ
LQLILFGKAFKGGSG*
Coding >Ophcf2|05741
ATGTCTTCCGTCGAGCAGCAGAAGGTTCTGGGCATGCCGCCCTTCATGGCGGACTTCTTGATGGGTGGTGTCTCC
GCCGCCGTCTCCAAGACTGCTGCCGCCCCCATCGAGCGTGTCAAGCTCCTCATCCAGAACCAGGATGAGATGATC
AAGTCTGGCCGTCTTGAGCGTCGTTTCAATGGCATCACGGACTGCTTCAAGCGCACCTGGGCCGACGAGGGTTTC
CTTTCTCTCTGGCGTGGCAACACGGCCAATGTCATCCGATACTTCCCCACCCAGGCCCTGAACTTTGCCTTCCGC
GACAAGTTCAAGAAGATGTTTGGCTTCAAGAAGGATCGCGATGGCTACGCTATGTGGATGGTTGGCAATCTGGCC
TCTGGTGGTGCTGCCGGTGCCACCTCCATGTTGTTCGTCTACTCTCTCGACTATGCCCGTACCCGTCTGGCCAAC
GACGCCAAGAACGCCAAGAAGGGTGGCGAGCGTCAGTTCAACGGCCTCATCGATGTCTACCGCAAGACCATGGCC
TCTGATGGTGTCGCCGGTCTCTACCGTGGCTTCATGCCCTCGGTCGCCGGCATCATCGTCTACCGCGGTCTCTAC
TTCGGCATGTACGACTCGTTCAAGCCCGTTCTCCTGACCGGTAACCTGGCGAACAACTTCCTGGCCTCGTTCATG
CTCGGTTGGTGCGTCACCACCGGCGCCGGCATTGCCGCCTACCCGCTCGACACCATCCGACGACGAATGATGATG
ACTTCGGGTGAGGCCGTCAAGTACAAGAACTCGTTCGACGCCGCCCGCCAGATCATTGCCAAGAACGGCGTCAAG
TCCCTGTTCAACGGTGCCGGTGCCAACATCCTCCGTGGCGTTGCCGGCGCTGGTGTGCTGTCCATCTACGACCAG
CTCCAGCTGATTCTCTTCGGCAAGGCCTTCAAGGGCGGCTCCGGCTAA
Transcript >Ophcf2|05741
ATGTCTTCCGTCGAGCAGCAGAAGGTTCTGGGCATGCCGCCCTTCATGGCGGACTTCTTGATGGGTGGTGTCTCC
GCCGCCGTCTCCAAGACTGCTGCCGCCCCCATCGAGCGTGTCAAGCTCCTCATCCAGAACCAGGATGAGATGATC
AAGTCTGGCCGTCTTGAGCGTCGTTTCAATGGCATCACGGACTGCTTCAAGCGCACCTGGGCCGACGAGGGTTTC
CTTTCTCTCTGGCGTGGCAACACGGCCAATGTCATCCGATACTTCCCCACCCAGGCCCTGAACTTTGCCTTCCGC
GACAAGTTCAAGAAGATGTTTGGCTTCAAGAAGGATCGCGATGGCTACGCTATGTGGATGGTTGGCAATCTGGCC
TCTGGTGGTGCTGCCGGTGCCACCTCCATGTTGTTCGTCTACTCTCTCGACTATGCCCGTACCCGTCTGGCCAAC
GACGCCAAGAACGCCAAGAAGGGTGGCGAGCGTCAGTTCAACGGCCTCATCGATGTCTACCGCAAGACCATGGCC
TCTGATGGTGTCGCCGGTCTCTACCGTGGCTTCATGCCCTCGGTCGCCGGCATCATCGTCTACCGCGGTCTCTAC
TTCGGCATGTACGACTCGTTCAAGCCCGTTCTCCTGACCGGTAACCTGGCGAACAACTTCCTGGCCTCGTTCATG
CTCGGTTGGTGCGTCACCACCGGCGCCGGCATTGCCGCCTACCCGCTCGACACCATCCGACGACGAATGATGATG
ACTTCGGGTGAGGCCGTCAAGTACAAGAACTCGTTCGACGCCGCCCGCCAGATCATTGCCAAGAACGGCGTCAAG
TCCCTGTTCAACGGTGCCGGTGCCAACATCCTCCGTGGCGTTGCCGGCGCTGGTGTGCTGTCCATCTACGACCAG
CTCCAGCTGATTCTCTTCGGCAAGGCCTTCAAGGGCGGCTCCGGCTAA
Gene >Ophcf2|05741
ATGTCTTCCGTCGAGCAGCAGAAGGTTCTGGGCATGCCGGTAAGTGTAGTCATCTTCTCCTCCTTGTGCCTTGCT
CTGGCGCTCTCTCCGCTGCTTCGTGACACGGTTGCCTCGTCGAGAGGCTCGTGAGACTTGGCAGACGAGGCCATC
GCAGAGCTCGAGGCTGAGCTTCATCGGCCTGGAGTGTTCGGACTGCCCAGAGCAGAGAAGCAATGGAAGCTTGAG
CGATACCCATGCTGAATGCTGATGTGCTCTCTAGCCCTTCATGGCGGACTTCTTGAGTACGTGTCATCGCCTCGA
TCGGCCTTCCAAAGAGGATTTCGGCAGCTGCCGAGTCGCACCTCGGTATCCCCCCTCTCATCGCTAACCGTGACG
TCTGCAGTGGGTGGTGTCTCCGCCGCCGTCTCCAAGACTGCTGCCGCCCCCATCGAGCGTGTCAAGCTCCTCATC
CAGAACCAGGATGAGATGATCAAGTCTGGCCGTCTTGAGCGTCGTTTCAATGGCATCACGGACTGCTTCAAGCGC
ACCTGGGCCGACGAGGGTTTCCTTTCTCTCTGGCGTGGCAACACGGCCAATGTCATCCGATACTTCCCCACCCAG
GCCCTGAACTTTGCCTTCCGCGACAAGTTCAAGAAGATGTTTGGCTTCAAGAAGGATCGCGATGGCTACGCTATG
TGGATGGTTGGCAATCTGGCCTCTGGTGGTGTAGGTTTCCCCCCTTGACGCGGACCCGTGCCCAGCCGCTGATCC
GGAATAGGCTGCCGGTGCCACCTCCATGTTGTTCGTCTACTCTCTCGACTATGCCCGTACCCGTCTGGCCAACGA
CGCCAAGAACGCCAAGAAGGGTGGCGAGCGTCAGTTCAACGGCCTCATCGATGTCTACCGCAAGACCATGGCCTC
TGATGGTGTCGCCGGTCTCTACCGTGGCTTCATGCCCTCGGTCGCCGGCATCATCGTCTACCGCGGTCTCTACTT
CGGCATGTACGACTCGTTCAAGCCCGTTCTCCTGACCGGTAACCTGGCGAACAACTTCCTGGCCTCGTTCATGCT
CGGTTGGTGCGTCACCACCGGCGCCGGCATTGCCGCCTACCCGCTCGACACCATCCGACGACGAATGATGATGAC
TTCGGGTGAGGCCGTCAAGTACAAGAACTCGTTCGACGCCGCCCGCCAGATCATTGCCAAGAACGGCGTCAAGTC
CCTGTTCAACGGTGCCGGTGCCAACATCCTCCGTGGCGTTGCCGGCGCTGGTGTGCTGTCCATCTACGACCAGCT
CCAGCTGATTCTCTTCGGCAAGGCCTTCAAGGGCGGCTCCGGCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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