© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophcf2|05723 |
| Gene name | |
| Location | scaffold_06:2113434..2116743 |
| Strand | + |
| Gene length (bp) | 3309 |
| Transcript length (bp) | 2118 |
| Coding sequence length (bp) | 2118 |
| Protein length (aa) | 706 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 4.8E-104 | 156 | 595 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.9E-23 | 159 | 512 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051234 | establishment of localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 33 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 149 | 171 | 22 |
| 2 | 191 | 212 | 21 |
| 3 | 224 | 246 | 22 |
| 4 | 312 | 334 | 22 |
| 5 | 399 | 421 | 22 |
| 6 | 436 | 458 | 22 |
| 7 | 465 | 487 | 22 |
| 8 | 497 | 519 | 22 |
| 9 | 559 | 581 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Fungus | Fungus in pure culture | 73.27 | 41.30 | 105.24 |
| Alive | In ants, during behavior modification | 137.86 | 67.33 | 208.39 |
| Dead | In ants, recently dead | 95.90 | 52.47 | 139.34 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Alive | Fungus | 0.001226 | yes |
| Alive | Dead | 0.041630 | yes |
| Dead | Fungus | 0.169553 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|05723 MSPRTPTISSSSRPRLPSNIPLRTLAATAAAAASDDAPSPRLSESESESSWTDTGDIGDQLADDNDPVRLQLPDD IEDELLARVQKRHQKRVRIRHPSPRRSPLLPCVVDKEAIDIPDVICPRPSFAERCIAAAMSGRSGSIHGLTGKAL LYFTSIFVSLGVFLFGYDQGVMSGIITGPYFIDYFDHPSKAHVGTMVAILEIGAFIASLIVGRVGDIIGRRRTIL YGSCIFFVGGALQTFSTSMAMMMVGRIVAGLGVGMLSTIVPVYQSEISPPHNRGKLACIEFSGNIIGYTTSVWVD YGCGFIESDLSWRVPLLMQCVMGALLGLGSLIIVESPRWLLDNDHDEEGMVVIANLYGGGDIHNAKARDEYRDIK MNVLLQRQEGERTYSDMFRRYRTRVFIAMSAQGLAQLNGINVISYYAPYVFESAGWVGHDAVLMTGLNGITYFLS TIPPWYLVDRWGRRAILLSGAIAMAISLSLISYFIYLDIRWTPRLVVLFVMIYNAAFGYSWGPVPWLYPPEILPL SIRSKGASLSTATNWAANWLVGEMTPILQEWIKWRLYLVHAFFCVVSFVIVYFIYPETCGVRLEDMDSLFGDAST IVGTPSIRAETGSLVRGGSPIGSGRGIIGSSAIPGLSLAPGSEMDDDNKSPTHPSGGAGAGAGEDRSVGGWLSRV VGGRGRADSAGSGQGRYAPLGQEEGSRHGN* |
| Coding | >Ophcf2|05723 ATGTCCCCCAGAACGCCCACCATTTCTTCCTCAAGCCGGCCTCGTCTTCCTTCCAACATCCCTCTGCGGACTCTC GCCGCCACCGCCGCCGCCGCCGCCTCCGACGACGCCCCATCGCCTCGCCTGTCCGAGTCCGAGTCCGAGTCCTCG TGGACCGACACGGGCGACATCGGCGACCAGCTCGCCGACGATAACGACCCGGTCCGTCTGCAGCTGCCCGACGAC ATCGAGGACGAGCTCCTCGCCCGTGTTCAGAAGCGTCATCAGAAACGAGTCCGCATCCGTCATCCCTCGCCTCGA CGCTCGCCCTTGCTGCCTTGCGTCGTCGACAAGGAAGCCATTGACATCCCCGACGTCATCTGTCCTCGACCCTCC TTTGCTGAGCGTTGCATCGCCGCCGCCATGTCCGGACGTTCGGGCTCCATACACGGCCTGACGGGCAAGGCCCTG CTCTACTTCACCAGCATATTCGTCTCCCTCGGCGTCTTCCTCTTCGGCTATGATCAGGGCGTCATGTCGGGCATC ATCACGGGTCCCTACTTCATCGACTACTTCGACCACCCGTCCAAGGCCCACGTCGGCACAATGGTCGCCATCCTC GAGATAGGCGCCTTCATCGCCTCCCTCATCGTCGGCCGTGTCGGTGACATCATCGGCCGACGACGAACCATCCTC TATGGATCCTGCATCTTCTTCGTCGGCGGCGCCCTCCAGACCTTTTCCACCTCGATGGCCATGATGATGGTCGGC CGCATCGTTGCCGGCCTCGGCGTTGGCATGCTCTCCACCATCGTCCCCGTCTACCAGTCCGAGATATCGCCCCCT CATAACCGCGGCAAGCTGGCCTGCATCGAGTTCTCCGGCAACATCATCGGCTACACCACCTCAGTCTGGGTCGAC TACGGCTGCGGCTTCATCGAGAGCGACTTGTCATGGCGCGTGCCGCTACTTATGCAATGCGTCATGGGCGCCCTC TTAGGCCTGGGCAGCCTCATCATCGTTGAGTCTCCGAGGTGGCTCCTCGACAACGATCACGATGAGGAGGGCATG GTTGTCATCGCCAATCTCTACGGCGGCGGAGACATTCACAACGCAAAGGCCCGCGACGAATACCGTGACATCAAG ATGAATGTGCTCCTCCAGCGCCAGGAGGGTGAGCGCACCTACTCGGACATGTTCCGCCGATACCGAACCCGCGTC TTCATTGCAATGTCCGCCCAGGGCCTGGCCCAGCTCAACGGCATCAACGTCATCTCCTACTACGCCCCCTACGTC TTCGAGTCGGCCGGCTGGGTCGGGCATGACGCCGTACTCATGACGGGCCTCAACGGCATCACCTACTTTCTCTCC ACCATACCGCCTTGGTACCTCGTTGATCGCTGGGGACGACGGGCCATTCTCCTCTCGGGCGCCATCGCCATGGCC ATATCTCTCTCCCTCATCTCTTACTTCATCTACCTCGACATCCGGTGGACGCCGCGGCTGGTGGTGTTGTTCGTC ATGATCTACAACGCCGCCTTTGGCTACTCGTGGGGGCCCGTCCCCTGGCTCTACCCACCCGAGATCCTGCCGCTG AGCATCCGGTCCAAGGGCGCCAGCCTGTCGACGGCCACCAACTGGGCCGCCAACTGGCTCGTGGGCGAGATGACG CCCATACTGCAGGAGTGGATCAAGTGGCGGCTCTACCTCGTCCACGCCTTCTTTTGCGTCGTCAGCTTCGTCATC GTGTACTTTATATATCCCGAGACGTGCGGCGTCCGGCTCGAAGACATGGATTCGCTCTTCGGCGACGCCAGCACC ATCGTCGGCACGCCCTCTATCCGGGCCGAGACGGGCTCGCTGGTGCGCGGCGGCTCGCCTATCGGGTCCGGCCGC GGCATCATCGGCTCGTCCGCCATACCGGGCCTGTCGCTGGCGCCGGGCTCCGAGATGGACGACGATAATAAGTCG CCGACGCACCCCAGCGGCGGCGCCGGCGCCGGGGCCGGCGAGGACCGATCCGTCGGCGGCTGGCTGTCGAGGGTC GTGGGAGGCCGGGGCCGCGCGGACAGCGCAGGTAGCGGTCAGGGCCGATACGCGCCTCTCGGCCAAGAGGAGGGC AGCCGCCACGGGAACTGA |
| Transcript | >Ophcf2|05723 ATGTCCCCCAGAACGCCCACCATTTCTTCCTCAAGCCGGCCTCGTCTTCCTTCCAACATCCCTCTGCGGACTCTC GCCGCCACCGCCGCCGCCGCCGCCTCCGACGACGCCCCATCGCCTCGCCTGTCCGAGTCCGAGTCCGAGTCCTCG TGGACCGACACGGGCGACATCGGCGACCAGCTCGCCGACGATAACGACCCGGTCCGTCTGCAGCTGCCCGACGAC ATCGAGGACGAGCTCCTCGCCCGTGTTCAGAAGCGTCATCAGAAACGAGTCCGCATCCGTCATCCCTCGCCTCGA CGCTCGCCCTTGCTGCCTTGCGTCGTCGACAAGGAAGCCATTGACATCCCCGACGTCATCTGTCCTCGACCCTCC TTTGCTGAGCGTTGCATCGCCGCCGCCATGTCCGGACGTTCGGGCTCCATACACGGCCTGACGGGCAAGGCCCTG CTCTACTTCACCAGCATATTCGTCTCCCTCGGCGTCTTCCTCTTCGGCTATGATCAGGGCGTCATGTCGGGCATC ATCACGGGTCCCTACTTCATCGACTACTTCGACCACCCGTCCAAGGCCCACGTCGGCACAATGGTCGCCATCCTC GAGATAGGCGCCTTCATCGCCTCCCTCATCGTCGGCCGTGTCGGTGACATCATCGGCCGACGACGAACCATCCTC TATGGATCCTGCATCTTCTTCGTCGGCGGCGCCCTCCAGACCTTTTCCACCTCGATGGCCATGATGATGGTCGGC CGCATCGTTGCCGGCCTCGGCGTTGGCATGCTCTCCACCATCGTCCCCGTCTACCAGTCCGAGATATCGCCCCCT CATAACCGCGGCAAGCTGGCCTGCATCGAGTTCTCCGGCAACATCATCGGCTACACCACCTCAGTCTGGGTCGAC TACGGCTGCGGCTTCATCGAGAGCGACTTGTCATGGCGCGTGCCGCTACTTATGCAATGCGTCATGGGCGCCCTC TTAGGCCTGGGCAGCCTCATCATCGTTGAGTCTCCGAGGTGGCTCCTCGACAACGATCACGATGAGGAGGGCATG GTTGTCATCGCCAATCTCTACGGCGGCGGAGACATTCACAACGCAAAGGCCCGCGACGAATACCGTGACATCAAG ATGAATGTGCTCCTCCAGCGCCAGGAGGGTGAGCGCACCTACTCGGACATGTTCCGCCGATACCGAACCCGCGTC TTCATTGCAATGTCCGCCCAGGGCCTGGCCCAGCTCAACGGCATCAACGTCATCTCCTACTACGCCCCCTACGTC TTCGAGTCGGCCGGCTGGGTCGGGCATGACGCCGTACTCATGACGGGCCTCAACGGCATCACCTACTTTCTCTCC ACCATACCGCCTTGGTACCTCGTTGATCGCTGGGGACGACGGGCCATTCTCCTCTCGGGCGCCATCGCCATGGCC ATATCTCTCTCCCTCATCTCTTACTTCATCTACCTCGACATCCGGTGGACGCCGCGGCTGGTGGTGTTGTTCGTC ATGATCTACAACGCCGCCTTTGGCTACTCGTGGGGGCCCGTCCCCTGGCTCTACCCACCCGAGATCCTGCCGCTG AGCATCCGGTCCAAGGGCGCCAGCCTGTCGACGGCCACCAACTGGGCCGCCAACTGGCTCGTGGGCGAGATGACG CCCATACTGCAGGAGTGGATCAAGTGGCGGCTCTACCTCGTCCACGCCTTCTTTTGCGTCGTCAGCTTCGTCATC GTGTACTTTATATATCCCGAGACGTGCGGCGTCCGGCTCGAAGACATGGATTCGCTCTTCGGCGACGCCAGCACC ATCGTCGGCACGCCCTCTATCCGGGCCGAGACGGGCTCGCTGGTGCGCGGCGGCTCGCCTATCGGGTCCGGCCGC GGCATCATCGGCTCGTCCGCCATACCGGGCCTGTCGCTGGCGCCGGGCTCCGAGATGGACGACGATAATAAGTCG CCGACGCACCCCAGCGGCGGCGCCGGCGCCGGGGCCGGCGAGGACCGATCCGTCGGCGGCTGGCTGTCGAGGGTC GTGGGAGGCCGGGGCCGCGCGGACAGCGCAGGTAGCGGTCAGGGCCGATACGCGCCTCTCGGCCAAGAGGAGGGC AGCCGCCACGGGAACTGA |
| Gene | >Ophcf2|05723 ATGTGTTCGTAGTACTATGTAGGTATGTATGAATACACGGTCAGGCTACCATCGATCATGGTCAGACTCGTGCCC CGCAATCGATTGTTTGTTTGCTGTCGTCACGCTGCCCTTCGGATCCGGATTGTCGGTTGATGGATGAGTGACGAG GTCAGTCAGACAACGATGCATACATACATGCCTGCACGTGAGGCCCGACGTGGCTGTCTGCACGAGGCCCGCCCC GGATATCTACCTAGGTGCCTACCTACCTACCTACTTATGTACCTTCCTACCCTACGGCCCGCGTGAATCCAGCCC GACGACTGCGTGCGACCCTCCCCCTAGCCGGCCAGACTCTAGGCCGAGGGCGGCAGAGGCTGGACGGGCGGCTTA GCACATGCCCGACCGCTACCACCACTATGGACCACCACGGCCACTAGGTACTACAGGCGGTAGCCTCTGCCCCTG GGCCCCTATTTCCAGCCGGGATGGAGTGGACAGCACGAAAACACCACGAAAACACCACTGCCCTTCCATCAGCCT CACTCATCATCATCAATATCCCACCGTCAATCGATCCTCTTCACCTTCGCTCTCCGCCTTCCGCTGTTCGTCCGT CACCTGCCCGCTCCCTCACCCTTGCAATTGAACCTCTCTCTCTTGTCTGCTGGTAGCGCCTCTGCCTCCCCCCCC TTCCGTTCGGCCCTCTCCGGACGCTAGCCAACATTCGGTCACCGTCACAGTGTTTCGCCTCGCCATCGCCGTTTG TGTTTTGTCACAACTCTGCTGGTCTGCTGTCCACCTACAACAGCCTACTCTCTACTGCAAAGAGCCGTCAGCCGA CCGTGCCGAGCCACACGGCCAAGCTTGGCCCAAACTCTCCCCCACACCCATCGCCGACCGCCAGAACCTCGCCGC CTCCCGTCTCGCCTCCGTCTCTCCTTGAAAGCAGGCGGGCGCTGCTGCTCAACAGCCCCCAGAACGCCCACCATT TCTTCCTCAAGCCGGCCTCGTCTTCCTTCCAACATCCCTCTGCGGACTCTCGCCGCCACCGCCGCCGCCGCCGCC TCCGACGACGCCCCATCGCCTCGCCTGTCCGAGTCCGAGTCCGAGTCCTCGTGGACCGACACGGGCGACATCGGC GACCAGCTCGCCGACGATAACGACCCGGTCCGTCTGCAGCTGCCCGACGACATCGAGGACGAGCTCCTCGCCCGT GTTCAGAAGCGTCATCAGAAACGAGTCCGCATCCGTCATCCCTCGCCTCGACGCTCGCCCTTGCTGCCTTGCGTC GTCGACAAGGAAGCCATTGACATCCCCGACGTCATCTGTCCTCGACCCTCCTTTGCTGAGCGTTGCATCGCCGCC GCCATGTCCGGACGTTCGGGCTCCATACACGGCCTGACGGGCAAGGCCCTGCTGTAACGCTCTCTAGTACAGACT CCCGCACGAGACGGGCCGCTGACGGCTCGCCAGCTACTTCACCAGCATATTCGTCTCCCTCGGCGTCTTCCTCTT CGGCTATGATCAGGGCGTCATGTCGGGCATCATCACGTATGTACTGCGAGCTCTCCCCTCCCCCCCCCCCCCCCC CAATCAGGCCCCCATCGGGCCCTGGAGCTAAAGCCACCAAGGGGTCCCTACTTCATCGACTACTTCGACCACCCG TCCAAGGCCCACGTCGGCACAATGGTCGCCATCCTCGAGATAGGCGCCTTCATCGCCTCCCTCATCGTCGGCCGT GTCGGTGACATCATCGGCCGACGACGAACCATCCTCTATGGATCCTGCATCTTCTTCGTCGGCGGCGCCCTCCAG ACCTTTTCCACCTCGATGGCCATGATGATGGTCGGCCGCATCGTTGCCGGCCTCGGCGTTGGCATGCTCTCCACC ATCGTCCCCGTCTACCAGTCCGAGATATCGCCCCCTCATAACCGCGGCAAGCTGGCCTGCATCGAGTTCTCCGGC AACATCATCGGCTACACCACCTCAGTCTGGGTCGACTACGGCTGCGGCTTCATCGAGAGCGACTTGTCATGGCGC GTGCCGCTACTTATGCAATGCGTCATGGGCGCCCTCTTAGGCCTGGGCAGCCTCATCATCGTTGAGTCTCCGAGG TGAGTCCGTCATCTGGCCTGTCACGTGTGCCTGCTAACCTTGTCCAGGTGGCTCCTCGACAACGATCACGATGAG GAGGGCATGGTTGTCATCGCCAATCTCTACGGCGGCGGAGACATTCACAACGCAAAGGCCCGCGACGAATACCGT GACATCAAGATGAATGTGCTCCTCCAGCGCCAGGAGGGTGAGCGCACCTACTCGGACATGTTCCGCCGATACCGA ACCCGCGTCTTCATTGCAATGTCCGCCCAGGGCCTGGCCCAGCTCAACGGCATCAACGTCATCTCCTACTACGCC CCCTACGTCTTCGAGTCGGCCGGCTGGGTCGGGCATGACGCCGTACTCATGACGGGCCTCAACGGCATCACCTAC TTTCTCTCCACCATACCGCCTTGGTACCTCGTTGATCGCTGGGGACGACGGGCCATTCTCCTCTCGGGCGCCATC GCCATGGCCATATCTCTCTCCCTCATCTCTTACTTCATCTACCTCGACATCCGGTGGACGCCGCGGCTGGTGGTG TTGTTCGTCATGATCTACAACGCCGCCTTTGGCTACTCGTGGGGGCCCGTCCCCTGGCTCTACCCACCCGAGATC CTGCCGCTGAGCATCCGGTCCAAGGGCGCCAGCCTGTCGACGGCCACCAACTGGGCCGCCAACTGGCTCGTGGGC GAGATGACGCCCATACTGCAGGAGTGGATCAAGTGGCGGCTCTACCTCGTCCACGCCTTCTTTTGCGTCGTCAGC TTCGTCATCGGTAAGTCTTGAGCCAGCGGGTGTAGATGCGCGAGACTGCTGACGTTGGGGGACGCAGTGTACTTT ATATATCCCGAGACGTGCGGCGTCCGGCTCGAAGACATGGATTCGCTCTTCGGCGACGCCAGCACCATCGTCGGC ACGCCCTCTATCCGGGCCGAGACGGGCTCGCTGGTGCGCGGCGGCTCGCCTATCGGGTCCGGCCGCGGCATCATC GGCTCGTCCGCCATACCGGGCCTGTCGCTGGCGCCGGGCTCCGAGATGGACGACGATAATAAGTCGCCGACGCAC CCCAGCGGCGGCGCCGGCGCCGGGGCCGGCGAGGACCGATCCGTCGGCGGCTGGCTGTCGAGGGTCGTGGGAGGC CGGGGCCGCGCGGACAGCGCAGGTAGCGGTCAGGGCCGATACGCGCCTCTCGGCCAAGAGGAGGGCAGCCGCCAC GGGAACTGA |