Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05722
Gene name
Locationscaffold_06:2111199..2112368
Strand-
Gene length (bp)1169
Transcript length (bp)888
Coding sequence length (bp)888
Protein length (aa) 296

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12271 Chs7 Chitin synthase export chaperone 3.8E-112 6 290

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 49 71 22
2 86 108 22
3 115 137 22
4 147 169 22
5 190 209 19
6 224 246 22
7 259 281 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05722
MGSTDFGKFEPFCRDATLPVCNLFSPDHNQDGPWGGCRLTGIPLAGDRHLGNLGSIILCAVAIAVAILLLLKSDK
KRAAVGRREMQLFLVGYIIIEICEIFSVGEFPLDPAVRVAFSAIHIGMIIATTWVLMLNALVGYQLLDDGTPLSI
GLTILSAAVLFIGTAYVALDTGFRWTGFWNSSYETPNVNYALYVLYQLVPLIFLVAYYVLEAVLVLRVLGEVRPM
LYLTTAAFFFALGQIFNYAISRYICNGTSGKIDGAMFETLFTLFAVIFVWIFWSSITEDDWPMQTTGTYP*
Coding >Ophcf2|05722
ATGGGGTCCACGGATTTTGGCAAGTTCGAGCCTTTCTGCAGAGACGCGACTCTGCCCGTCTGCAACCTGTTCTCG
CCCGACCACAATCAAGATGGGCCTTGGGGCGGCTGTCGACTCACCGGAATCCCCCTCGCCGGCGACCGCCATCTG
GGGAACCTGGGATCCATCATCCTGTGCGCCGTCGCCATCGCCGTCGCCATCTTGTTGCTGCTCAAGTCGGACAAG
AAGCGGGCAGCCGTCGGCCGCCGGGAGATGCAGCTGTTCCTCGTCGGCTACATCATCATCGAGATATGCGAAATC
TTCTCCGTCGGCGAGTTTCCGCTCGATCCTGCTGTCCGCGTTGCTTTCTCCGCCATTCACATCGGCATGATCATC
GCTACAACCTGGGTTCTCATGCTTAATGCCCTGGTGGGCTATCAACTACTCGACGACGGCACCCCGCTATCCATC
GGCCTGACTATCCTCTCCGCTGCCGTACTCTTCATCGGCACCGCCTACGTCGCCCTCGACACGGGATTCCGCTGG
ACTGGCTTCTGGAACAGCAGCTACGAAACTCCCAACGTCAATTACGCCCTCTACGTCCTCTATCAGCTCGTGCCT
CTCATATTCCTCGTTGCTTACTACGTTCTGGAAGCCGTCCTGGTGCTACGAGTGCTCGGCGAGGTTCGCCCCATG
CTGTACCTGACGACGGCCGCCTTCTTCTTCGCCCTCGGCCAGATCTTCAACTACGCCATCAGCCGCTACATTTGC
AATGGCACCAGTGGAAAGATTGACGGCGCCATGTTCGAAACGCTCTTCACCCTCTTCGCCGTCATCTTCGTCTGG
ATCTTCTGGTCAAGCATTACCGAGGACGACTGGCCGATGCAGACGACCGGCACATATCCGTGA
Transcript >Ophcf2|05722
ATGGGGTCCACGGATTTTGGCAAGTTCGAGCCTTTCTGCAGAGACGCGACTCTGCCCGTCTGCAACCTGTTCTCG
CCCGACCACAATCAAGATGGGCCTTGGGGCGGCTGTCGACTCACCGGAATCCCCCTCGCCGGCGACCGCCATCTG
GGGAACCTGGGATCCATCATCCTGTGCGCCGTCGCCATCGCCGTCGCCATCTTGTTGCTGCTCAAGTCGGACAAG
AAGCGGGCAGCCGTCGGCCGCCGGGAGATGCAGCTGTTCCTCGTCGGCTACATCATCATCGAGATATGCGAAATC
TTCTCCGTCGGCGAGTTTCCGCTCGATCCTGCTGTCCGCGTTGCTTTCTCCGCCATTCACATCGGCATGATCATC
GCTACAACCTGGGTTCTCATGCTTAATGCCCTGGTGGGCTATCAACTACTCGACGACGGCACCCCGCTATCCATC
GGCCTGACTATCCTCTCCGCTGCCGTACTCTTCATCGGCACCGCCTACGTCGCCCTCGACACGGGATTCCGCTGG
ACTGGCTTCTGGAACAGCAGCTACGAAACTCCCAACGTCAATTACGCCCTCTACGTCCTCTATCAGCTCGTGCCT
CTCATATTCCTCGTTGCTTACTACGTTCTGGAAGCCGTCCTGGTGCTACGAGTGCTCGGCGAGGTTCGCCCCATG
CTGTACCTGACGACGGCCGCCTTCTTCTTCGCCCTCGGCCAGATCTTCAACTACGCCATCAGCCGCTACATTTGC
AATGGCACCAGTGGAAAGATTGACGGCGCCATGTTCGAAACGCTCTTCACCCTCTTCGCCGTCATCTTCGTCTGG
ATCTTCTGGTCAAGCATTACCGAGGACGACTGGCCGATGCAGACGACCGGCACATATCCGTGA
Gene >Ophcf2|05722
ATGGGGTCCACGGATTTTGGCAAGTTCGAGGTACGGCTCTTCTCTTGCCTCGTCTCTACCAAGCCCTCACAACCC
GAGCTGACCATCCTCTCTCTCCATTCAGCCTTTCTGCAGAGACGCGACTCTGCCCGTCTGCAACGTATGTGTGCT
CCCAAAGACACAATAGGGGACCGACTAGTTTCCCCAACCGTGCTCAACCCACAACCTACCGCCCGTGCGCTGACC
CGAACTCAAAGCTGTTCTCGCCCGACCACAATCAAGATGGGCCTTGGGGCGGCTGTCGACTCACCGGAATCCCCC
TCGCCGGCGACCGCCATCTGGGGAACCTGGGATCCATCATCCTGTGCGCCGTCGCCATCGCCGTCGCCATCTTGT
TGCTGCTCAAGTCGGACAAGAAGCGGGCAGCCGTCGGCCGCCGGTTGGTTGCCTCTTTGCTGCCGTCGTGCATCG
CTGACGGACGCGCCGCCATAGGGAGATGCAGCTGTTCCTCGTCGGCTACATCATCATCGAGATATGCGAAATCTT
CTCCGTCGGCGAGTTTCCGCTCGATCCTGCTGTCCGCGTTGTGCGTCGTCGTCACCGTCATCTATATCTCGACAC
TGCTGACACGCTCTACTTCACAGGCTTTCTCCGCCATTCACATCGGCATGATCATCGCTACAACCTGGGTTCTCA
TGCTTAATGCCCTGGTGGGCTATCAACTACTCGACGACGGCACCCCGCTATCCATCGGCCTGACTATCCTCTCCG
CTGCCGTACTCTTCATCGGCACCGCCTACGTCGCCCTCGACACGGGATTCCGCTGGACTGGCTTCTGGAACAGCA
GCTACGAAACTCCCAACGTCAATTACGCCCTCTACGTCCTCTATCAGCTCGTGCCTCTCATATTCCTCGTTGCTT
ACTACGTTCTGGAAGCCGTCCTGGTGCTACGAGTGCTCGGCGAGGTTCGCCCCATGCTGTACCTGACGACGGCCG
CCTTCTTCTTCGCCCTCGGCCAGATCTTCAACTACGCCATCAGCCGCTACATTTGCAATGGCACCAGTGGAAAGA
TTGACGGCGCCATGTTCGAAACGCTCTTCACCCTCTTCGCCGTCATCTTCGTCTGGATCTTCTGGTCAAGCATTA
CCGAGGACGACTGGCCGATGCAGACGACCGGCACATATCCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail