Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05678
Gene name
Locationscaffold_06:1977368..1978612
Strand+
Gene length (bp)1244
Transcript length (bp)1071
Coding sequence length (bp)1071
Protein length (aa) 357

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03239 FTR1 Iron permease FTR1 family 2.7E-79 9 312

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0033573 high-affinity iron permease complex Yes
GO:0005381 iron ion transmembrane transporter activity Yes
GO:0034755 iron ion transmembrane transport Yes
GO:1902494 catalytic complex No
GO:0032991 protein-containing complex No
GO:0034220 ion transmembrane transport No
GO:1990351 transporter complex No
GO:0000041 transition metal ion transport No
GO:0098655 cation transmembrane transport No
GO:0005215 transporter activity No
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0022857 transmembrane transporter activity No
GO:1902495 transmembrane transporter complex No
GO:0046915 transition metal ion transmembrane transporter activity No
GO:0006810 transport No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0009987 cellular process No
GO:0110165 cellular anatomical entity No
GO:0051234 establishment of localization No
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0046873 metal ion transmembrane transporter activity No
GO:0006811 ion transport No
GO:0055085 transmembrane transport No
GO:0098796 membrane protein complex No
GO:0030001 metal ion transport No
GO:0015075 ion transmembrane transporter activity No
GO:0006826 iron ion transport No
GO:0098660 inorganic ion transmembrane transport No
GO:0008150 biological_process No
GO:0098797 plasma membrane protein complex No
GO:1905862 ferroxidase complex No
GO:0005575 cellular_component No
GO:0098662 inorganic cation transmembrane transport No
GO:1990204 oxidoreductase complex No
GO:0008324 cation transmembrane transporter activity No
GO:0006812 cation transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.5

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 51 73 22
3 88 110 22
4 144 166 22
5 176 195 19
6 207 229 22
7 288 310 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05678
MGSPYFFSVPVFLIVFRETLEAVIIVSILLAFLSQTLDKNAQAYRVLRRQVWIGVASGFVLCMIIAGAVIGVWYT
LSKNSWEANENYYEGAFCIVASVIITIMGAALLRIGNMRDKWRVKVARALDAPVKTGSRRWWAQLPEKYAMFYLP
FITVLREGVEAVVFIAGVSFPEPATAVPLPVIVGLGLGIFIGWLLYKGASTAKLQLFLVLSTCLLYLVAAGLFSR
GVWHFETQEWNIAVGGDAAETGDGPGSYDIDRSVWHVNCCSPVGPNSRGWGIFNAILGWQNSATYGSVISYNMYW
IAVVTAFVVMRFRENKSNWPAFGTDSPKDDSQASDNGAGVVESKHIPQEKTVAVSA*
Coding >Ophcf2|05678
ATGGGTTCCCCATACTTCTTCTCCGTCCCCGTCTTCCTCATCGTCTTCCGCGAGACGCTCGAGGCCGTCATCATC
GTCTCCATCCTCCTCGCCTTTCTCAGCCAGACGCTCGACAAGAATGCGCAGGCCTACCGTGTCTTGAGGCGCCAG
GTCTGGATCGGCGTCGCCTCCGGCTTCGTTCTCTGCATGATTATCGCCGGCGCCGTCATTGGCGTCTGGTACACC
CTCAGTAAAAACTCGTGGGAGGCAAACGAAAACTACTACGAGGGCGCCTTCTGCATCGTCGCCTCCGTCATCATC
ACCATCATGGGCGCCGCTCTCCTGCGCATTGGCAATATGCGCGACAAATGGCGTGTCAAGGTCGCTCGCGCCTTG
GATGCTCCCGTCAAGACCGGCTCGCGTCGCTGGTGGGCGCAGCTGCCAGAGAAATATGCCATGTTCTACCTGCCC
TTCATCACCGTTCTTCGTGAGGGAGTCGAGGCCGTCGTCTTCATCGCCGGCGTCTCCTTTCCCGAGCCGGCCACT
GCCGTGCCGCTGCCCGTCATCGTCGGCCTTGGCCTCGGCATCTTCATCGGCTGGCTCCTGTACAAGGGCGCCTCT
ACCGCCAAGTTGCAGCTGTTCCTCGTCCTTTCCACCTGCCTGCTGTATCTCGTCGCCGCCGGCCTCTTCTCCCGT
GGCGTCTGGCACTTTGAGACGCAGGAGTGGAACATTGCCGTGGGAGGCGATGCCGCAGAGACCGGTGACGGACCA
GGCTCCTATGACATCGACAGGAGTGTGTGGCACGTCAATTGCTGCTCGCCCGTGGGTCCCAATTCTCGCGGCTGG
GGTATTTTCAATGCTATTCTGGGCTGGCAGAATTCGGCCACGTACGGGTCCGTCATTTCGTACAACATGTACTGG
ATCGCCGTCGTCACCGCCTTTGTCGTCATGCGCTTCCGCGAGAACAAGAGCAACTGGCCTGCGTTCGGTACCGAC
TCACCCAAGGACGACTCTCAAGCAAGTGACAACGGGGCCGGCGTTGTCGAGTCCAAGCATATTCCACAGGAGAAG
ACGGTGGCCGTGTCGGCTTAG
Transcript >Ophcf2|05678
ATGGGTTCCCCATACTTCTTCTCCGTCCCCGTCTTCCTCATCGTCTTCCGCGAGACGCTCGAGGCCGTCATCATC
GTCTCCATCCTCCTCGCCTTTCTCAGCCAGACGCTCGACAAGAATGCGCAGGCCTACCGTGTCTTGAGGCGCCAG
GTCTGGATCGGCGTCGCCTCCGGCTTCGTTCTCTGCATGATTATCGCCGGCGCCGTCATTGGCGTCTGGTACACC
CTCAGTAAAAACTCGTGGGAGGCAAACGAAAACTACTACGAGGGCGCCTTCTGCATCGTCGCCTCCGTCATCATC
ACCATCATGGGCGCCGCTCTCCTGCGCATTGGCAATATGCGCGACAAATGGCGTGTCAAGGTCGCTCGCGCCTTG
GATGCTCCCGTCAAGACCGGCTCGCGTCGCTGGTGGGCGCAGCTGCCAGAGAAATATGCCATGTTCTACCTGCCC
TTCATCACCGTTCTTCGTGAGGGAGTCGAGGCCGTCGTCTTCATCGCCGGCGTCTCCTTTCCCGAGCCGGCCACT
GCCGTGCCGCTGCCCGTCATCGTCGGCCTTGGCCTCGGCATCTTCATCGGCTGGCTCCTGTACAAGGGCGCCTCT
ACCGCCAAGTTGCAGCTGTTCCTCGTCCTTTCCACCTGCCTGCTGTATCTCGTCGCCGCCGGCCTCTTCTCCCGT
GGCGTCTGGCACTTTGAGACGCAGGAGTGGAACATTGCCGTGGGAGGCGATGCCGCAGAGACCGGTGACGGACCA
GGCTCCTATGACATCGACAGGAGTGTGTGGCACGTCAATTGCTGCTCGCCCGTGGGTCCCAATTCTCGCGGCTGG
GGTATTTTCAATGCTATTCTGGGCTGGCAGAATTCGGCCACGTACGGGTCCGTCATTTCGTACAACATGTACTGG
ATCGCCGTCGTCACCGCCTTTGTCGTCATGCGCTTCCGCGAGAACAAGAGCAACTGGCCTGCGTTCGGTACCGAC
TCACCCAAGGACGACTCTCAAGCAAGTGACAACGGGGCCGGCGTTGTCGAGTCCAAGCATATTCCACAGGAGAAG
ACGGTGGCCGTGTCGGCTTAG
Gene >Ophcf2|05678
ATGGGTTCCCCATACTTCTTCTCCGTCCCCGTCTTCCTCATCGTCTTCCGCGAGACGCTCGAGGCCGTCATCATC
GTCTCCATCCTCCTCGCCTTTCTCAGCCAGACGCTCGACAAGAATGCGCAGGCCTACCGTGTCTTGAGGCGCCAG
GTGACGATGCCTTCTCTTTCCCCTCGACCCGTCCATATCGTTGACCCGGTCTGAAGGTCTGGATCGGCGTCGCCT
CCGGCTTCGTTCTCTGCATGATTATCGCCGGCGCCGTCATTGGCGTCTGGTACACCCTCAGTAAAAACTCGTGGG
AGGCAAACGAAAACTACTACGAGGGCGCCTTCTGCATCGTCGCCTCCGTCATCATCACCATCATGGGCGCCGCTC
TCCTGCGCATTGGCAATATGCGCGACAAATGGCGTGTCAAGGTCGCTCGCGCCTTGGATGCTCCCGTCAAGACCG
GCTCGCGTCGCTGGTGGGCGCAGCTGCCAGAGAAATATGCCATGTTCTACCTGCCCTTCATCACCGTTCTTCGTG
AGGGAGTCGAGGCCGTCGTCTTCATCGCCGGCGTCTCCTTTCCCGAGCCGGCCACTGCCGTGCCGCTGCCCGTCA
TCGTCGGCCTTGGCCTCGGCATCTTCATCGGCTGGCTCCTGTACAAGTGCGTTCGAACATCGGCCTCCATTGGCC
CGTGCCGCCCTGCTAACCTTTATCGCCTGACTCCAGGGGCGCCTCTACCGCCAAGTTGCAGCTGTTCCTCGTCCT
TTCCACCTGCCTGCTGTATCTCGTCGCCGCCGGCCTCTTCTCCCGTGGCGTCTGGCACTTTGAGACGCAGGAGTG
GAACATTGCCGTGGGAGGCGATGCCGCAGAGACCGGTGACGGACCAGGCTCCTATGACATCGACAGGAGTGTGTG
GCACGTCAATGTAAGCTTCCCCTCAGCCTCCCAGGTTGATCCCGGTCCTGACCCCCGCCAAGTGCTGCTCGCCCG
TGGGTCCCAATTCTCGCGGCTGGGGTATTTTCAATGCTATTCTGGGCTGGCAGAATTCGGCCACGTACGGGTCCG
TCATTTCGTACAACATGTACTGGATCGCCGTCGTCACCGCCTTTGTCGTCATGCGCTTCCGCGAGAACAAGAGCA
ACTGGCCTGCGTTCGGTACCGACTCACCCAAGGACGACTCTCAAGCAAGTGACAACGGGGCCGGCGTTGTCGAGT
CCAAGCATATTCCACAGGAGAAGACGGTGGCCGTGTCGGCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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