Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05658
Gene name
Locationscaffold_06:1918750..1919668
Strand-
Gene length (bp)918
Transcript length (bp)867
Coding sequence length (bp)867
Protein length (aa) 289

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PFAM Domains

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 263 285 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05658
MRPSQSLVSLALGLSSLAAAALRPNFENNAVAADSSSSSGSISTDASASPTTDSSKSDPTPVPTKSSPDSSRTAS
DDADSDKSTASDKSDKKKPTATKKGGDEKTSTHTGFPPDAPPAGVNMLTPLPNLEPTPLYRIRDTVTWAWNYTSM
LGTPTAIDVIISCSVAAQTWTLTSNMSFATSVTYTWDTNDQGNSVETPLLTERYTLIVKDSDVDFTAPPEPGYLG
TAKNFFTFGLYTGIPYKPLSEWKCNTCSGAASLFDQQALGLAVVTSTLTILSFTWFVAGLNLH*
Coding >Ophcf2|05658
ATGCGTCCTTCCCAGTCACTCGTTTCGCTGGCCCTCGGCCTGAGCTCTCTCGCCGCCGCTGCTTTGAGGCCCAAC
TTCGAAAATAATGCTGTTGCGGCAGACAGCAGCAGTTCATCGGGCTCGATTTCCACCGACGCATCAGCCTCGCCA
ACGACCGACTCCTCCAAATCAGACCCGACGCCGGTGCCGACCAAGTCGAGCCCGGACTCATCCCGCACCGCGTCC
GATGATGCCGACTCGGACAAATCCACTGCTTCTGACAAGTCGGACAAAAAAAAGCCCACGGCCACAAAGAAAGGG
GGCGATGAAAAAACAAGCACTCACACCGGCTTTCCCCCTGACGCTCCGCCCGCCGGCGTCAACATGCTCACTCCG
CTGCCCAATCTCGAGCCGACGCCTCTGTACCGCATCCGTGATACCGTCACCTGGGCCTGGAATTACACTTCAATG
CTCGGCACTCCGACTGCCATCGACGTCATCATCAGCTGTTCCGTCGCTGCCCAGACCTGGACTCTTACCAGCAAC
ATGTCGTTTGCCACGTCGGTCACCTATACATGGGACACCAACGACCAGGGAAACTCGGTCGAGACGCCGCTTCTG
ACGGAAAGGTACACGCTCATCGTCAAGGACTCGGACGTCGACTTCACCGCCCCGCCCGAGCCGGGCTATCTGGGC
ACCGCTAAGAACTTCTTCACCTTCGGTCTTTACACTGGCATTCCTTACAAGCCTTTGAGCGAATGGAAATGCAAT
ACTTGCAGCGGCGCGGCATCTCTCTTTGATCAGCAGGCCCTCGGTCTGGCTGTAGTGACGAGCACCCTCACCATC
CTGAGCTTTACCTGGTTCGTCGCCGGCCTGAACTTGCACTGA
Transcript >Ophcf2|05658
ATGCGTCCTTCCCAGTCACTCGTTTCGCTGGCCCTCGGCCTGAGCTCTCTCGCCGCCGCTGCTTTGAGGCCCAAC
TTCGAAAATAATGCTGTTGCGGCAGACAGCAGCAGTTCATCGGGCTCGATTTCCACCGACGCATCAGCCTCGCCA
ACGACCGACTCCTCCAAATCAGACCCGACGCCGGTGCCGACCAAGTCGAGCCCGGACTCATCCCGCACCGCGTCC
GATGATGCCGACTCGGACAAATCCACTGCTTCTGACAAGTCGGACAAAAAAAAGCCCACGGCCACAAAGAAAGGG
GGCGATGAAAAAACAAGCACTCACACCGGCTTTCCCCCTGACGCTCCGCCCGCCGGCGTCAACATGCTCACTCCG
CTGCCCAATCTCGAGCCGACGCCTCTGTACCGCATCCGTGATACCGTCACCTGGGCCTGGAATTACACTTCAATG
CTCGGCACTCCGACTGCCATCGACGTCATCATCAGCTGTTCCGTCGCTGCCCAGACCTGGACTCTTACCAGCAAC
ATGTCGTTTGCCACGTCGGTCACCTATACATGGGACACCAACGACCAGGGAAACTCGGTCGAGACGCCGCTTCTG
ACGGAAAGGTACACGCTCATCGTCAAGGACTCGGACGTCGACTTCACCGCCCCGCCCGAGCCGGGCTATCTGGGC
ACCGCTAAGAACTTCTTCACCTTCGGTCTTTACACTGGCATTCCTTACAAGCCTTTGAGCGAATGGAAATGCAAT
ACTTGCAGCGGCGCGGCATCTCTCTTTGATCAGCAGGCCCTCGGTCTGGCTGTAGTGACGAGCACCCTCACCATC
CTGAGCTTTACCTGGTTCGTCGCCGGCCTGAACTTGCACTGA
Gene >Ophcf2|05658
ATGCGTCCTTCCCAGTCACTCGTTTCGCTGGCCCTCGGCCTGAGCTCTCTCGCCGCCGCTGCTTTGAGGCCCAAC
TTCGAAAATAATGCTGTTGCGGCAGACAGCAGCAGTTCATCGGGCTCGAGTATGCCTCTCGTCGTGCCCAAGCTC
TCTCCTCGCTGACGCACATGGCCAGTTTCCACCGACGCATCAGCCTCGCCAACGACCGACTCCTCCAAATCAGAC
CCGACGCCGGTGCCGACCAAGTCGAGCCCGGACTCATCCCGCACCGCGTCCGATGATGCCGACTCGGACAAATCC
ACTGCTTCTGACAAGTCGGACAAAAAAAAGCCCACGGCCACAAAGAAAGGGGGCGATGAAAAAACAAGCACTCAC
ACCGGCTTTCCCCCTGACGCTCCGCCCGCCGGCGTCAACATGCTCACTCCGCTGCCCAATCTCGAGCCGACGCCT
CTGTACCGCATCCGTGATACCGTCACCTGGGCCTGGAATTACACTTCAATGCTCGGCACTCCGACTGCCATCGAC
GTCATCATCAGCTGTTCCGTCGCTGCCCAGACCTGGACTCTTACCAGCAACATGTCGTTTGCCACGTCGGTCACC
TATACATGGGACACCAACGACCAGGGAAACTCGGTCGAGACGCCGCTTCTGACGGAAAGGTACACGCTCATCGTC
AAGGACTCGGACGTCGACTTCACCGCCCCGCCCGAGCCGGGCTATCTGGGCACCGCTAAGAACTTCTTCACCTTC
GGTCTTTACACTGGCATTCCTTACAAGCCTTTGAGCGAATGGAAATGCAATACTTGCAGCGGCGCGGCATCTCTC
TTTGATCAGCAGGCCCTCGGTCTGGCTGTAGTGACGAGCACCCTCACCATCCTGAGCTTTACCTGGTTCGTCGCC
GGCCTGAACTTGCACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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