Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05652
Gene name
Locationscaffold_06:1906487..1907440
Strand+
Gene length (bp)953
Transcript length (bp)903
Coding sequence length (bp)903
Protein length (aa) 301

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00722 Glyco_hydro_16 Glycosyl hydrolases family 16 5.9E-12 41 179

GO

GO Term Description Terminal node
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Yes
GO:0005975 carbohydrate metabolic process Yes
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No
GO:0008152 metabolic process No
GO:0003824 catalytic activity No
GO:0008150 biological_process No
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0003674 molecular_function No
GO:0016787 hydrolase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.45

Transmembrane Domains

Domain # Start End Length
1 273 295 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05652
MADNNDWVRQQFNVTATAGRGRYGKSFSLENIQPHEAQEAPALQLRVDKVLRGGAVTAAEMDSARNDLHWGSYRA
GMKLTAVNGTCAAFFWYLNDTQEIDMEFLSHEYNAGKRVYPVNLAIQSRKSMEAGYDASRTTTYKRVKLDFDPTA
AFHEYRFDYLPGRVVFYADSVELAVMDGDEMPSASGHLILQHWSNGDPMWSGGPPEEDALLAVSYVKAYFNSSES
KESWEKGCRQSGGSAICNVPGVTAANASSGGQFFTDGGSRKKGGEADSGCAGGGGWGLMATAVMALAILINSRGR
*
Coding >Ophcf2|05652
ATGGCGGACAACAACGACTGGGTCCGCCAGCAGTTCAACGTGACGGCTACGGCTGGACGTGGCAGATACGGCAAG
TCTTTTAGCTTGGAGAATATCCAGCCTCATGAAGCCCAAGAAGCCCCGGCCCTTCAGCTGCGCGTTGACAAAGTG
CTCAGAGGCGGTGCCGTGACGGCGGCGGAGATGGACTCGGCCAGAAATGACCTTCACTGGGGGTCGTATCGCGCA
GGCATGAAGTTGACGGCTGTCAATGGCACATGCGCTGCCTTTTTCTGGTACCTGAACGACACGCAAGAAATTGAC
ATGGAGTTTCTGTCGCATGAATACAACGCCGGCAAGCGTGTGTATCCCGTCAATCTTGCGATACAGTCGAGAAAA
TCGATGGAAGCCGGCTACGACGCCTCGAGGACGACGACTTACAAGCGAGTCAAGCTCGACTTTGATCCGACGGCC
GCCTTCCACGAGTACCGGTTTGACTATCTGCCCGGGCGAGTCGTCTTCTACGCCGATAGCGTCGAACTAGCCGTC
ATGGACGGCGACGAGATGCCATCAGCGTCAGGTCACCTCATCCTCCAGCACTGGAGCAACGGCGATCCCATGTGG
TCAGGCGGACCGCCCGAGGAGGACGCCTTGCTGGCAGTGAGCTACGTCAAGGCTTACTTCAACTCATCGGAGAGC
AAGGAAAGCTGGGAGAAAGGCTGCCGTCAGTCGGGCGGCTCAGCCATATGCAACGTCCCCGGAGTGACGGCTGCC
AACGCGAGCTCGGGAGGCCAATTCTTCACCGACGGCGGGTCGCGGAAGAAGGGCGGCGAGGCGGACAGCGGGTGT
GCTGGCGGCGGCGGCTGGGGGCTAATGGCCACGGCCGTGATGGCACTGGCCATACTCATCAACAGTCGGGGGAGG
TGA
Transcript >Ophcf2|05652
ATGGCGGACAACAACGACTGGGTCCGCCAGCAGTTCAACGTGACGGCTACGGCTGGACGTGGCAGATACGGCAAG
TCTTTTAGCTTGGAGAATATCCAGCCTCATGAAGCCCAAGAAGCCCCGGCCCTTCAGCTGCGCGTTGACAAAGTG
CTCAGAGGCGGTGCCGTGACGGCGGCGGAGATGGACTCGGCCAGAAATGACCTTCACTGGGGGTCGTATCGCGCA
GGCATGAAGTTGACGGCTGTCAATGGCACATGCGCTGCCTTTTTCTGGTACCTGAACGACACGCAAGAAATTGAC
ATGGAGTTTCTGTCGCATGAATACAACGCCGGCAAGCGTGTGTATCCCGTCAATCTTGCGATACAGTCGAGAAAA
TCGATGGAAGCCGGCTACGACGCCTCGAGGACGACGACTTACAAGCGAGTCAAGCTCGACTTTGATCCGACGGCC
GCCTTCCACGAGTACCGGTTTGACTATCTGCCCGGGCGAGTCGTCTTCTACGCCGATAGCGTCGAACTAGCCGTC
ATGGACGGCGACGAGATGCCATCAGCGTCAGGTCACCTCATCCTCCAGCACTGGAGCAACGGCGATCCCATGTGG
TCAGGCGGACCGCCCGAGGAGGACGCCTTGCTGGCAGTGAGCTACGTCAAGGCTTACTTCAACTCATCGGAGAGC
AAGGAAAGCTGGGAGAAAGGCTGCCGTCAGTCGGGCGGCTCAGCCATATGCAACGTCCCCGGAGTGACGGCTGCC
AACGCGAGCTCGGGAGGCCAATTCTTCACCGACGGCGGGTCGCGGAAGAAGGGCGGCGAGGCGGACAGCGGGTGT
GCTGGCGGCGGCGGCTGGGGGCTAATGGCCACGGCCGTGATGGCACTGGCCATACTCATCAACAGTCGGGGGAGG
TGA
Gene >Ophcf2|05652
ATGGCGGACAACAACGACTGGGTCCGCCAGCAGTTCAACGTGACGGCTACGGCTGGACGTGGCAGATACGGCAAG
TCTTTTAGCTTGGAGAATATCCAGCCTCATGAAGCCCAAGAAGCCCCGGCCCTTCAGCTGCGCGTTGACAAAGTG
CTCAGAGGCGGTGCCGTGACGGCGGCGGAGATGGACTCGGCCAGAAATGACCTTCACTGGGGGTCGTATCGCGCA
GGCATGAAGTTGACGGCTGTCAATGGCACATGCGCTGCCTTTTTCTGGGTGTGTGCAGCTGGTGACGTGGGCAGC
ATGGGCTCTAAACTGAAGCTTAGTACCTGAACGACACGCAAGAAATTGACATGGAGTTTCTGTCGCATGAATACA
ACGCCGGCAAGCGTGTGTATCCCGTCAATCTTGCGATACAGTCGAGAAAATCGATGGAAGCCGGCTACGACGCCT
CGAGGACGACGACTTACAAGCGAGTCAAGCTCGACTTTGATCCGACGGCCGCCTTCCACGAGTACCGGTTTGACT
ATCTGCCCGGGCGAGTCGTCTTCTACGCCGATAGCGTCGAACTAGCCGTCATGGACGGCGACGAGATGCCATCAG
CGTCAGGTCACCTCATCCTCCAGCACTGGAGCAACGGCGATCCCATGTGGTCAGGCGGACCGCCCGAGGAGGACG
CCTTGCTGGCAGTGAGCTACGTCAAGGCTTACTTCAACTCATCGGAGAGCAAGGAAAGCTGGGAGAAAGGCTGCC
GTCAGTCGGGCGGCTCAGCCATATGCAACGTCCCCGGAGTGACGGCTGCCAACGCGAGCTCGGGAGGCCAATTCT
TCACCGACGGCGGGTCGCGGAAGAAGGGCGGCGAGGCGGACAGCGGGTGTGCTGGCGGCGGCGGCTGGGGGCTAA
TGGCCACGGCCGTGATGGCACTGGCCATACTCATCAACAGTCGGGGGAGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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