Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05634
Gene name
Locationscaffold_06:1313988..1314845
Strand+
Gene length (bp)857
Transcript length (bp)672
Coding sequence length (bp)672
Protein length (aa) 224

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 165 182 17
2 189 211 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05634
MTSSSGRENYNHPSLEDDDLIIPDNDDLNALDPLSAQPPSAQTLTGNIGSQLPSRPLDGSFLTSTIPGEDRRAPQ
NTIDETVWDTLSRDLRAVWEKLREVLYPRYLLGGTLFDFEAGIRGAYSNMRGAGIAGTREELAGLASRVMDPEAL
LQGNMSSGLRNWDMWGPLIFCLLLSLLLSFTARSDQKDAVFSGVFAIIWLGEAVVTLQIKLLGGNISFAQSLP*
Coding >Ophcf2|05634
ATGACTTCTTCTAGTGGAAGAGAAAATTACAACCATCCCTCTCTAGAAGATGACGACCTTATTATTCCTGATAAT
GACGATCTCAATGCTCTTGATCCGCTATCCGCACAGCCCCCATCTGCCCAGACTCTGACGGGCAACATCGGCTCC
CAACTACCTTCGCGGCCTTTGGACGGAAGCTTCCTGACTTCCACGATTCCGGGCGAGGACAGACGGGCACCGCAG
AACACAATTGACGAGACCGTTTGGGATACTCTCAGCCGCGATCTTCGCGCAGTCTGGGAGAAACTGCGGGAAGTT
TTGTACCCGAGATATCTTCTAGGCGGGACACTATTCGACTTCGAAGCCGGCATCCGCGGCGCTTACTCCAACATG
CGCGGTGCTGGTATCGCCGGCACCAGGGAAGAGCTGGCAGGTCTCGCTAGCCGAGTCATGGATCCTGAGGCGCTG
CTGCAGGGCAATATGAGCTCCGGTCTTCGAAATTGGGACATGTGGGGACCGCTTATATTCTGTCTGCTGCTAAGC
TTACTGCTCAGCTTCACCGCCCGCTCGGATCAAAAAGACGCGGTATTTAGCGGCGTCTTTGCTATCATATGGCTC
GGAGAGGCGGTGGTCACATTGCAAATCAAGCTCCTCGGCGGAAATATATCATTTGCCCAGAGTCTGCCTTGA
Transcript >Ophcf2|05634
ATGACTTCTTCTAGTGGAAGAGAAAATTACAACCATCCCTCTCTAGAAGATGACGACCTTATTATTCCTGATAAT
GACGATCTCAATGCTCTTGATCCGCTATCCGCACAGCCCCCATCTGCCCAGACTCTGACGGGCAACATCGGCTCC
CAACTACCTTCGCGGCCTTTGGACGGAAGCTTCCTGACTTCCACGATTCCGGGCGAGGACAGACGGGCACCGCAG
AACACAATTGACGAGACCGTTTGGGATACTCTCAGCCGCGATCTTCGCGCAGTCTGGGAGAAACTGCGGGAAGTT
TTGTACCCGAGATATCTTCTAGGCGGGACACTATTCGACTTCGAAGCCGGCATCCGCGGCGCTTACTCCAACATG
CGCGGTGCTGGTATCGCCGGCACCAGGGAAGAGCTGGCAGGTCTCGCTAGCCGAGTCATGGATCCTGAGGCGCTG
CTGCAGGGCAATATGAGCTCCGGTCTTCGAAATTGGGACATGTGGGGACCGCTTATATTCTGTCTGCTGCTAAGC
TTACTGCTCAGCTTCACCGCCCGCTCGGATCAAAAAGACGCGGTATTTAGCGGCGTCTTTGCTATCATATGGCTC
GGAGAGGCGGTGGTCACATTGCAAATCAAGCTCCTCGGCGGAAATATATCATTTGCCCAGAGTCTGCCTTGA
Gene >Ophcf2|05634
ATGACTTCTTCTAGTGGAAGAGAAAATTACAACCATCCCTCTCTAGAAGATGACGACCTTATTATTCCTGATAAT
GGTATGGTGAGATGGTGGCTACGTGGCGGGCGCTCGCATTATATCTAGAAACTTGCTCACTTCACAACTACGAGT
CGAGTTAGACGATCTCAATGCTCTTGATCCGCTATCCGCACAGCCCCCATCTGCCCAGACTCTGACGGGCAACAT
CGGCTCCCAACTACCTTCGCGGCCTTTGGACGGAAGCTTCCTGACTTCCACGATTCCGGGCGAGGACAGACGGGC
ACCGCAGAACACAATTGACGAGACCGTTTGGGATACTCTCAGCCGCGATCTTCGCGCAGTCTGGGAGAAACTGCG
GGAAGTTTTGTACCCGAGATATCTTCTAGGCGGGACACTATTCGACTTCGAAGCCGGCATCCGCGGCGCTTACTC
CAACATGCGCGGTGCTGGTATCGCCGGCACCAGGGAAGAGCTGGCAGGTCTCGCTAGCCGAGTCATGGATCCTGA
GGCGCTGCTGCAGGGCAATATGAGCTCCGGTCTTCGAAATTGGGACATGTGGGGACCGCTTATATTCTGTCTGCT
GCTAAGCTTACTGCTCAGCTTCACCGCCCGCTCGGATCAAAAAGACGCGGTATTTAGCGGCGTCTTTGCTATCAT
ATGGCTCGGAGAGGCGGTGGTCACATTGCAAATCAAGCTCCTCGGCGGAAATATGTAAGACTGCCTAACACCTTG
ATTTCGTCTCTTGGCCGGCATTGCAGCTGATGATGAAATCAGATCATTTGCCCAGAGTGTATGCATTATCGGATA
CACTCTGTTCCCTCTGGTTTTAGCTGCCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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