© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|05531 |
| Gene name | |
| Location | scaffold_06:489623..491196 |
| Strand | - |
| Gene length (bp) | 1573 |
| Transcript length (bp) | 1515 |
| Coding sequence length (bp) | 1515 |
| Protein length (aa) | 505 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.6E-34 | 62 | 430 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051179 | localization | No |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0051234 | establishment of localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 55 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 57 | 76 | 19 |
| 2 | 96 | 118 | 22 |
| 3 | 125 | 144 | 19 |
| 4 | 154 | 176 | 22 |
| 5 | 185 | 207 | 22 |
| 6 | 217 | 239 | 22 |
| 7 | 292 | 314 | 22 |
| 8 | 329 | 346 | 17 |
| 9 | 353 | 375 | 22 |
| 10 | 380 | 402 | 22 |
| 11 | 414 | 436 | 22 |
| 12 | 446 | 468 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Fungus | Fungus in pure culture | 3.62 | 0.99 | 6.25 |
| Alive | In ants, during behavior modification | 10.34 | 4.21 | 16.46 |
| Dead | In ants, recently dead | 9.68 | 3.82 | 15.54 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Alive | Fungus | 0.000851 | yes |
| Alive | Dead | 0.808154 | no |
| Dead | Fungus | 0.001043 | yes |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|05531 MAVEMASSDGGGGGGGGGGDLEHKNSTESHQAQWQQTAECPPHTTERKLLARIDMHVMPFLCIMYLLAFLDRVNI SNADLFGLSKDLHLGATSTKFNTVLVIFFVPYCLFEIPSNMLLKRFRPHVWLALNMFLFGFTTMMQGLVRSYGGL LACRFFLGLFETGMFPGAFYLIGMWYRRHEAQKRYSFFFGSTTLAGAFGGLLAAALGQMAGLRGFSGWRWIFLIE GAITVFFSFFFFFLLPDFPEDSKWLTTDEKKFVAARLRLDQGRSAVERPVTLGNVAAVLSDPKVILGGFMYLGLI VPAYGYAYFSPFIISGYGYSPVQTQLHSVPPWAAAFVTAMVVAYLSDRMRHRFVFALVSILVCITGFGILVGVSH HRDLQYAALFLFAAGAYTAMPIIVCWFNMNLGGHHRRAVGSAWQVGFGNLGGIIAVFIFQRKDGPRFIPGLSIAL AFAVMSIVACGLYALSCLKDNRQRSRLAASEAVELADEEKTTLGDKSPDYRYLL* |
| Coding | >Ophcf2|05531 ATGGCAGTCGAGATGGCCTCTTCTGACGGCGGCGGCGGCGGCGGCGGCGGAGGCGGTGACCTCGAGCACAAGAAC TCTACCGAGAGCCACCAAGCCCAATGGCAGCAGACGGCCGAGTGTCCTCCTCACACGACGGAGCGCAAGTTGCTG GCCCGTATCGACATGCACGTCATGCCTTTTCTGTGCATCATGTATCTCCTGGCCTTTCTCGACCGCGTCAACATC TCCAACGCCGACCTCTTCGGTCTCTCCAAGGATCTCCATCTCGGCGCAACCAGCACCAAGTTCAACACGGTTCTC GTCATCTTCTTCGTCCCCTATTGCCTCTTCGAGATACCCTCCAATATGCTGCTGAAACGCTTCCGCCCCCACGTT TGGCTCGCCCTCAACATGTTTCTCTTTGGCTTCACCACCATGATGCAGGGCCTGGTTCGCAGCTACGGCGGTCTA CTCGCCTGCCGCTTCTTCCTCGGCCTCTTTGAGACGGGCATGTTCCCGGGCGCCTTTTACCTCATCGGCATGTGG TACCGTCGTCACGAGGCTCAGAAGCGCTACTCTTTCTTCTTCGGCAGCACCACTCTCGCCGGCGCCTTTGGAGGT CTGCTGGCTGCTGCTCTCGGTCAGATGGCCGGTCTGCGCGGTTTCAGCGGTTGGCGCTGGATCTTCCTGATCGAG GGCGCCATCACCGTCTTCTTCAGCTTCTTCTTCTTCTTCCTGCTGCCCGACTTCCCCGAGGACTCCAAGTGGTTG ACGACGGACGAAAAGAAGTTTGTCGCCGCTCGCCTCCGTCTCGACCAGGGTCGCTCGGCTGTCGAACGCCCTGTC ACCCTTGGAAACGTCGCTGCCGTCCTGTCGGACCCAAAGGTCATCTTGGGCGGCTTCATGTATCTGGGACTCATC GTGCCCGCCTACGGCTACGCCTATTTCTCGCCCTTCATCATCTCAGGATACGGCTACAGCCCCGTTCAGACGCAG CTGCATAGCGTTCCGCCCTGGGCCGCCGCCTTTGTCACGGCCATGGTGGTCGCCTATCTCTCGGACCGGATGCGG CACCGCTTCGTCTTCGCCCTGGTCTCGATCCTCGTCTGTATCACGGGCTTCGGCATCCTCGTCGGCGTCAGTCAC CATCGCGATCTGCAGTACGCTGCCCTCTTCCTCTTCGCCGCCGGCGCTTACACCGCCATGCCCATCATCGTCTGC TGGTTCAACATGAACCTCGGCGGCCACCATCGTCGTGCCGTCGGCAGCGCCTGGCAGGTCGGCTTTGGAAACCTG GGCGGCATCATCGCCGTCTTCATCTTTCAGAGAAAGGACGGACCCAGGTTTATTCCCGGCCTCAGCATCGCACTG GCCTTTGCTGTCATGAGCATCGTCGCTTGCGGTCTGTACGCCCTGTCGTGTCTCAAAGACAACCGCCAAAGATCA AGATTGGCGGCAAGTGAAGCCGTCGAGCTGGCCGATGAGGAAAAGACGACTCTGGGTGACAAGTCTCCCGACTAT CGCTACCTCCTCTGA |
| Transcript | >Ophcf2|05531 ATGGCAGTCGAGATGGCCTCTTCTGACGGCGGCGGCGGCGGCGGCGGCGGAGGCGGTGACCTCGAGCACAAGAAC TCTACCGAGAGCCACCAAGCCCAATGGCAGCAGACGGCCGAGTGTCCTCCTCACACGACGGAGCGCAAGTTGCTG GCCCGTATCGACATGCACGTCATGCCTTTTCTGTGCATCATGTATCTCCTGGCCTTTCTCGACCGCGTCAACATC TCCAACGCCGACCTCTTCGGTCTCTCCAAGGATCTCCATCTCGGCGCAACCAGCACCAAGTTCAACACGGTTCTC GTCATCTTCTTCGTCCCCTATTGCCTCTTCGAGATACCCTCCAATATGCTGCTGAAACGCTTCCGCCCCCACGTT TGGCTCGCCCTCAACATGTTTCTCTTTGGCTTCACCACCATGATGCAGGGCCTGGTTCGCAGCTACGGCGGTCTA CTCGCCTGCCGCTTCTTCCTCGGCCTCTTTGAGACGGGCATGTTCCCGGGCGCCTTTTACCTCATCGGCATGTGG TACCGTCGTCACGAGGCTCAGAAGCGCTACTCTTTCTTCTTCGGCAGCACCACTCTCGCCGGCGCCTTTGGAGGT CTGCTGGCTGCTGCTCTCGGTCAGATGGCCGGTCTGCGCGGTTTCAGCGGTTGGCGCTGGATCTTCCTGATCGAG GGCGCCATCACCGTCTTCTTCAGCTTCTTCTTCTTCTTCCTGCTGCCCGACTTCCCCGAGGACTCCAAGTGGTTG ACGACGGACGAAAAGAAGTTTGTCGCCGCTCGCCTCCGTCTCGACCAGGGTCGCTCGGCTGTCGAACGCCCTGTC ACCCTTGGAAACGTCGCTGCCGTCCTGTCGGACCCAAAGGTCATCTTGGGCGGCTTCATGTATCTGGGACTCATC GTGCCCGCCTACGGCTACGCCTATTTCTCGCCCTTCATCATCTCAGGATACGGCTACAGCCCCGTTCAGACGCAG CTGCATAGCGTTCCGCCCTGGGCCGCCGCCTTTGTCACGGCCATGGTGGTCGCCTATCTCTCGGACCGGATGCGG CACCGCTTCGTCTTCGCCCTGGTCTCGATCCTCGTCTGTATCACGGGCTTCGGCATCCTCGTCGGCGTCAGTCAC CATCGCGATCTGCAGTACGCTGCCCTCTTCCTCTTCGCCGCCGGCGCTTACACCGCCATGCCCATCATCGTCTGC TGGTTCAACATGAACCTCGGCGGCCACCATCGTCGTGCCGTCGGCAGCGCCTGGCAGGTCGGCTTTGGAAACCTG GGCGGCATCATCGCCGTCTTCATCTTTCAGAGAAAGGACGGACCCAGGTTTATTCCCGGCCTCAGCATCGCACTG GCCTTTGCTGTCATGAGCATCGTCGCTTGCGGTCTGTACGCCCTGTCGTGTCTCAAAGACAACCGCCAAAGATCA AGATTGGCGGCAAGTGAAGCCGTCGAGCTGGCCGATGAGGAAAAGACGACTCTGGGTGACAAGTCTCCCGACTAT CGCTACCTCCTCTGA |
| Gene | >Ophcf2|05531 ATGGCAGTCGAGATGGCCTCTTCTGACGGCGGCGGCGGCGGCGGCGGCGGAGGCGGTGACCTCGAGCACAAGAAC TCTACCGAGAGCCACCAAGCCCAATGGCAGCAGACGGCCGAGTGTCCTCCTCACACGACGGAGCGCAAGTTGCTG GCCCGTATCGACATGCACGTCATGCCTTTTCTGTGCATCATGTATCTCCTGGCCTTTCTCGGTGAGCCTCTCTCT CGTCTTCTCCAGAGAATCACCCGTTTTGATTCTCAGGCTTATAGACCGCGTCAACATCTCCAACGCCGACCTCTT CGGTCTCTCCAAGGATCTCCATCTCGGCGCAACCAGCACCAAGTTCAACACGGTTCTCGTCATCTTCTTCGTCCC CTATTGCCTCTTCGAGATACCCTCCAATATGCTGCTGAAACGCTTCCGCCCCCACGTTTGGCTCGCCCTCAACAT GTTTCTCTTTGGCTTCACCACCATGATGCAGGGCCTGGTTCGCAGCTACGGCGGTCTACTCGCCTGCCGCTTCTT CCTCGGCCTCTTTGAGACGGGCATGTTCCCGGGCGCCTTTTACCTCATCGGCATGTGGTACCGTCGTCACGAGGC TCAGAAGCGCTACTCTTTCTTCTTCGGCAGCACCACTCTCGCCGGCGCCTTTGGAGGTCTGCTGGCTGCTGCTCT CGGTCAGATGGCCGGTCTGCGCGGTTTCAGCGGTTGGCGCTGGATCTTCCTGATCGAGGGCGCCATCACCGTCTT CTTCAGCTTCTTCTTCTTCTTCCTGCTGCCCGACTTCCCCGAGGACTCCAAGTGGTTGACGACGGACGAAAAGAA GTTTGTCGCCGCTCGCCTCCGTCTCGACCAGGGTCGCTCGGCTGTCGAACGCCCTGTCACCCTTGGAAACGTCGC TGCCGTCCTGTCGGACCCAAAGGTCATCTTGGGCGGCTTCATGTATCTGGGACTCATCGTGCCCGCCTACGGCTA CGCCTATTTCTCGCCCTTCATCATCTCAGGATACGGCTACAGCCCCGTTCAGACGCAGCTGCATAGCGTTCCGCC CTGGGCCGCCGCCTTTGTCACGGCCATGGTGGTCGCCTATCTCTCGGACCGGATGCGGCACCGCTTCGTCTTCGC CCTGGTCTCGATCCTCGTCTGTATCACGGGCTTCGGCATCCTCGTCGGCGTCAGTCACCATCGCGATCTGCAGTA CGCTGCCCTCTTCCTCTTCGCCGCCGGCGCTTACACCGCCATGCCCATCATCGTCTGCTGGTTCAACATGAACCT CGGCGGCCACCATCGTCGTGCCGTCGGCAGCGCCTGGCAGGTCGGCTTTGGAAACCTGGGCGGCATCATCGCCGT CTTCATCTTTCAGAGAAAGGACGGACCCAGGTTTATTCCCGGCCTCAGCATCGCACTGGCCTTTGCTGTCATGAG CATCGTCGCTTGCGGTCTGTACGCCCTGTCGTGTCTCAAAGACAACCGCCAAAGATCAAGATTGGCGGCAAGTGA AGCCGTCGAGCTGGCCGATGAGGAAAAGACGACTCTGGGTGACAAGTCTCCCGACTATCGCTACCTCCTCTGA |