Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05523
Gene name
Locationscaffold_06:463897..465184
Strand+
Gene length (bp)1287
Transcript length (bp)1086
Coding sequence length (bp)1086
Protein length (aa) 362

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.5

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 45 64 19
3 101 123 22
4 135 157 22
5 186 208 22
6 221 243 22
7 258 275 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05523
MIAVPDKDVPIEFWTNLTLGTLLILARVVVRWRTQTFRGLAVDDFLMAAVIPISLAGAGAGYVVEADTEGLSNAG
MTPEERASLDPASREFQLRTMGSMFHIYGWILYTTLLWILKLSWLFYYKRLGERVDNMALKVKLGFAFIAVSYLV
VLFSTFLGCRPFSKYWQINPDPENFCHPSESNLLAWVVLWTDLTTDFYIIAIPLPMIWRTRISMRKKIGLMAMFG
GGIMTIIMGALRCGFILVEGDVGGVAARWSDREVFVAIVLSTIPVLLPIFRQRFWPRKNKFSSARSASNDVSASR
PPEKAIVRLTTVTHQTVTRQSTGSLMLDSESLRGDVDNVSLPIMMNVPSLREGRDEAGDKV*
Coding >Ophcf2|05523
ATGATCGCCGTACCAGATAAGGATGTCCCGATCGAGTTTTGGACGAATTTGACCCTTGGAACTCTCTTGATCTTG
GCCAGGGTCGTTGTGCGATGGAGGACGCAGACGTTTCGCGGCCTGGCCGTCGATGACTTTCTCATGGCTGCCGTC
ATCCCCATCTCCTTGGCTGGCGCAGGGGCTGGTTATGTCGTCGAGGCAGACACAGAAGGGCTGTCGAACGCTGGA
ATGACGCCCGAGGAGCGTGCCTCGCTCGATCCCGCGAGCCGCGAGTTCCAGCTGCGTACGATGGGCTCCATGTTC
CACATCTACGGCTGGATCCTTTACACGACGCTGCTTTGGATCCTGAAGCTGAGCTGGCTCTTCTACTACAAGCGT
CTCGGCGAACGTGTCGATAACATGGCGCTCAAGGTCAAGCTTGGCTTCGCCTTCATTGCCGTTTCCTACCTGGTC
GTTCTCTTTTCCACCTTCTTGGGTTGTCGGCCCTTTTCGAAGTATTGGCAGATTAACCCGGACCCTGAGAACTTT
TGTCATCCATCCGAGTCGAATCTTCTGGCTTGGGTCGTTCTCTGGACAGATCTGACGACTGACTTTTATATTATT
GCTATCCCCTTGCCAATGATCTGGCGCACCCGCATCTCGATGAGAAAAAAGATTGGTCTCATGGCCATGTTTGGC
GGCGGCATCATGACCATCATCATGGGCGCCCTCCGCTGCGGCTTCATCCTCGTCGAGGGAGACGTCGGCGGCGTA
GCAGCCAGATGGTCCGACCGAGAAGTCTTCGTCGCCATCGTCCTCTCCACCATCCCCGTCCTCCTCCCCATCTTC
CGCCAGAGATTCTGGCCTCGCAAGAACAAGTTCAGCTCCGCCAGGTCGGCCTCCAACGATGTCAGCGCATCGCGT
CCGCCGGAAAAGGCCATCGTCAGGCTTACCACGGTGACGCACCAGACGGTCACGCGGCAGAGTACGGGGTCTCTG
ATGCTGGATAGTGAGTCTTTGAGGGGGGATGTGGATAATGTCTCGTTGCCTATTATGATGAACGTGCCGTCTTTG
AGGGAGGGGAGGGATGAGGCTGGGGATAAGGTTTGA
Transcript >Ophcf2|05523
ATGATCGCCGTACCAGATAAGGATGTCCCGATCGAGTTTTGGACGAATTTGACCCTTGGAACTCTCTTGATCTTG
GCCAGGGTCGTTGTGCGATGGAGGACGCAGACGTTTCGCGGCCTGGCCGTCGATGACTTTCTCATGGCTGCCGTC
ATCCCCATCTCCTTGGCTGGCGCAGGGGCTGGTTATGTCGTCGAGGCAGACACAGAAGGGCTGTCGAACGCTGGA
ATGACGCCCGAGGAGCGTGCCTCGCTCGATCCCGCGAGCCGCGAGTTCCAGCTGCGTACGATGGGCTCCATGTTC
CACATCTACGGCTGGATCCTTTACACGACGCTGCTTTGGATCCTGAAGCTGAGCTGGCTCTTCTACTACAAGCGT
CTCGGCGAACGTGTCGATAACATGGCGCTCAAGGTCAAGCTTGGCTTCGCCTTCATTGCCGTTTCCTACCTGGTC
GTTCTCTTTTCCACCTTCTTGGGTTGTCGGCCCTTTTCGAAGTATTGGCAGATTAACCCGGACCCTGAGAACTTT
TGTCATCCATCCGAGTCGAATCTTCTGGCTTGGGTCGTTCTCTGGACAGATCTGACGACTGACTTTTATATTATT
GCTATCCCCTTGCCAATGATCTGGCGCACCCGCATCTCGATGAGAAAAAAGATTGGTCTCATGGCCATGTTTGGC
GGCGGCATCATGACCATCATCATGGGCGCCCTCCGCTGCGGCTTCATCCTCGTCGAGGGAGACGTCGGCGGCGTA
GCAGCCAGATGGTCCGACCGAGAAGTCTTCGTCGCCATCGTCCTCTCCACCATCCCCGTCCTCCTCCCCATCTTC
CGCCAGAGATTCTGGCCTCGCAAGAACAAGTTCAGCTCCGCCAGGTCGGCCTCCAACGATGTCAGCGCATCGCGT
CCGCCGGAAAAGGCCATCGTCAGGCTTACCACGGTGACGCACCAGACGGTCACGCGGCAGAGTACGGGGTCTCTG
ATGCTGGATAGTGAGTCTTTGAGGGGGGATGTGGATAATGTCTCGTTGCCTATTATGATGAACGTGCCGTCTTTG
AGGGAGGGGAGGGATGAGGCTGGGGATAAGGTTTGA
Gene >Ophcf2|05523
ATGATCGCCGTACCAGATAAGGATGTCCCGATCGAGTTTTGGACGAATTTGACCCTTGGAACTCTCTTGATCTTG
GCCAGGGTCGTTGTGCGATGGAGGACGCAGACGTTTCGCGGCCTGGCCGTCGATGACTTTCTCATGGCTGCCGTC
ATCGTGAGTCTCGGTATCAAGACTGCCATCTTTCACGCTGACGCAGGTGTCAGCCCATCTCCTTGGCTGGCGCAG
GGGCTGGTTATGTCGTCGAGGCAGACACAGAAGGGCTGTCGAACGCTGGGTACGTTGACCATCCTCTCTTGTCGT
TGGCAGCATTTAATACCTCGTCAGAATGACGCCCGAGGAGCGTGCCTCGCTCGATCCCGCGAGCCGCGAGTTCCA
GCTGCGTACGATGGGCTCCATGTTCCACATCTACGGCTGGATCCTTTACACGACGCTGCTTTGGATCCTGAAGCT
GAGCTGGCTCTTCTACTACAAGCGTCTCGGCGAACGTGTCGATAACATGGCGCTCAAGGTCAAGCTTGGCTTCGC
CTTCATTGCCGTTTCCTACCTGGTCGTTCTCTTTTCCACCTTCTTGGGTTGTCGGCCCTTTTCGAAGTATTGGCA
GATTAACCCGGACCCTGAGAGTGAGTTGGGTCTTTGAGATTGGTGAGATGGTGACTGATTGAGGCAGACTTTTGT
CATCCATCCGAGTCGAATCTTCTGGCTTGGGTCGTTCTCTGGACAGATCTGACGACTGACTTTTATATTATTGCT
ATCCCCTTGCCAGTGAGTTGATAGATGCCGGAACCCGTTCCCATGACTTCGCACTGACAATGGCAGATGATCTGG
CGCACCCGCATCTCGATGAGAAAAAAGATTGGTCTCATGGCCATGTTTGGCGGCGGCATCATGACCATCATCATG
GGCGCCCTCCGCTGCGGCTTCATCCTCGTCGAGGGAGACGTCGGCGGCGTAGCAGCCAGATGGTCCGACCGAGAA
GTCTTCGTCGCCATCGTCCTCTCCACCATCCCCGTCCTCCTCCCCATCTTCCGCCAGAGATTCTGGCCTCGCAAG
AACAAGTTCAGCTCCGCCAGGTCGGCCTCCAACGATGTCAGCGCATCGCGTCCGCCGGAAAAGGCCATCGTCAGG
CTTACCACGGTGACGCACCAGACGGTCACGCGGCAGAGTACGGGGTCTCTGATGCTGGATAGTGAGTCTTTGAGG
GGGGATGTGGATAATGTCTCGTTGCCTATTATGATGAACGTGCCGTCTTTGAGGGAGGGGAGGGATGAGGCTGGG
GATAAGGTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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