Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05511
Gene name
Locationscaffold_06:441363..442407
Strand-
Gene length (bp)1044
Transcript length (bp)984
Coding sequence length (bp)984
Protein length (aa) 328

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 279 301 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05511
MRSLLTLVLLLVAAASGRSYVQPSDAILTPRDAVLLPYVSFESPDGLLIRRQAGRQAAGAVQLTPDKGANNDTNF
DRAANAVCIEALKKLPKSTNPSGNCLCYNLPSLNTETGSFTADLRVFRVSEPRDNFAGIAPGEINVGVQYDGATV
TLASPQQMQQTLSQPIARRQAQARSEPEIIQSYMFIGQINPDRMNNQLALVDLEPLVTPKSFKLSAKDKTGGTVS
TEVSFNEASFLIGVFADQVVQSDFGAAQAAVDDRKAAVRNGTAAFVLPGVQIMIFPVGLIITSVWVFIGTTAYGI
GTYQRALYAKAWRRRTRSAAQAVGRSI*
Coding >Ophcf2|05511
ATGCGAAGCCTCCTGACCCTCGTCCTCTTGCTGGTAGCCGCAGCATCGGGCCGCTCCTACGTCCAGCCGTCGGAC
GCGATCCTGACGCCTCGAGATGCCGTCTTGCTGCCCTACGTCTCGTTCGAGTCTCCCGATGGGCTCCTGATTCGA
CGCCAGGCCGGACGACAAGCAGCCGGCGCCGTTCAACTCACGCCCGACAAGGGAGCCAATAACGATACGAACTTT
GACAGGGCCGCCAATGCCGTCTGTATCGAGGCCCTCAAGAAGTTGCCCAAGAGCACCAATCCGTCGGGCAACTGC
CTGTGCTACAACTTGCCGTCGCTCAACACCGAAACGGGCAGCTTCACCGCTGATCTCCGCGTCTTTCGCGTCTCC
GAGCCTCGCGACAACTTTGCCGGCATCGCTCCGGGCGAGATCAACGTCGGCGTCCAGTACGACGGCGCCACCGTC
ACCTTGGCCTCGCCCCAGCAGATGCAGCAGACGCTCTCCCAACCCATTGCTCGTCGACAGGCCCAGGCCCGGTCT
GAGCCCGAAATCATCCAATCCTACATGTTTATCGGCCAGATCAACCCCGATCGAATGAACAATCAGCTTGCCTTG
GTCGACCTTGAGCCCCTTGTCACGCCCAAGTCGTTCAAGCTCTCGGCCAAAGACAAGACGGGAGGCACCGTCAGC
ACCGAAGTCTCGTTCAACGAGGCCTCGTTTCTCATCGGCGTCTTCGCCGACCAGGTGGTTCAGTCCGACTTCGGC
GCCGCCCAGGCCGCTGTGGACGATAGAAAGGCAGCGGTCCGCAACGGCACGGCGGCCTTTGTGCTACCGGGCGTG
CAGATCATGATCTTCCCCGTCGGCCTCATCATCACCAGCGTCTGGGTTTTCATCGGCACTACCGCCTACGGTATT
GGCACTTACCAGCGGGCTCTGTACGCAAAGGCCTGGCGCCGGCGGACGAGGTCGGCGGCCCAGGCGGTTGGCAGG
TCCATTTGA
Transcript >Ophcf2|05511
ATGCGAAGCCTCCTGACCCTCGTCCTCTTGCTGGTAGCCGCAGCATCGGGCCGCTCCTACGTCCAGCCGTCGGAC
GCGATCCTGACGCCTCGAGATGCCGTCTTGCTGCCCTACGTCTCGTTCGAGTCTCCCGATGGGCTCCTGATTCGA
CGCCAGGCCGGACGACAAGCAGCCGGCGCCGTTCAACTCACGCCCGACAAGGGAGCCAATAACGATACGAACTTT
GACAGGGCCGCCAATGCCGTCTGTATCGAGGCCCTCAAGAAGTTGCCCAAGAGCACCAATCCGTCGGGCAACTGC
CTGTGCTACAACTTGCCGTCGCTCAACACCGAAACGGGCAGCTTCACCGCTGATCTCCGCGTCTTTCGCGTCTCC
GAGCCTCGCGACAACTTTGCCGGCATCGCTCCGGGCGAGATCAACGTCGGCGTCCAGTACGACGGCGCCACCGTC
ACCTTGGCCTCGCCCCAGCAGATGCAGCAGACGCTCTCCCAACCCATTGCTCGTCGACAGGCCCAGGCCCGGTCT
GAGCCCGAAATCATCCAATCCTACATGTTTATCGGCCAGATCAACCCCGATCGAATGAACAATCAGCTTGCCTTG
GTCGACCTTGAGCCCCTTGTCACGCCCAAGTCGTTCAAGCTCTCGGCCAAAGACAAGACGGGAGGCACCGTCAGC
ACCGAAGTCTCGTTCAACGAGGCCTCGTTTCTCATCGGCGTCTTCGCCGACCAGGTGGTTCAGTCCGACTTCGGC
GCCGCCCAGGCCGCTGTGGACGATAGAAAGGCAGCGGTCCGCAACGGCACGGCGGCCTTTGTGCTACCGGGCGTG
CAGATCATGATCTTCCCCGTCGGCCTCATCATCACCAGCGTCTGGGTTTTCATCGGCACTACCGCCTACGGTATT
GGCACTTACCAGCGGGCTCTGTACGCAAAGGCCTGGCGCCGGCGGACGAGGTCGGCGGCCCAGGCGGTTGGCAGG
TCCATTTGA
Gene >Ophcf2|05511
ATGCGAAGCCTCCTGACCCTCGTCCTCTTGCTGGTAGCCGCAGCATCGGGCCGCTCCTACGTCCAGCCGTCGGAC
GCGATCCTGACGCCTCGAGATGCCGTCTTGCTGCCCTACGTCTCGTTCGAGTCTCCCGATGGGCTCCTGATTCGA
CGCCAGGCCGGACGACAAGCAGCCGGCGCCGTTCAACTCACGCCCGACAAGGGAGCCAATAACGATACGAACTTT
GACAGGGCCGCCAATGCCGTCTGTATCGAGGCCCTCAAGAAGTTGCCCAAGAGCACCAATCCGTCGGGCAACTGC
CTGTGCTACAACTTGCCGTCGCTCAACACCGAAACGGGCAGCTTCACCGCTGATCTCCGCGTCTTTCGCGTCTCC
GAGCCTCGCGACAACTTTGCCGGCATCGCTCCGGGCGAGATCAACGTCGGCGTCCAGTACGACGGCGCCACCGTC
ACCTTGGCCTCGCCCCAGCAGATGCAGCAGACGCTCTCCCAACCCATTGCTCGTCGACAGGCCCAGGCCCGGTCT
GAGCCCGAAATCATCCAATCCTACATGTTTATCGGCCAGATCAACCCCGATCGAATGAACAATCAGCTTGCCTTG
TAAGTTTCGTGTTCTTGGGTGATGAGCTCGAGACAAGCCAACTAATCAATCACCTACAGGGTCGACCTTGAGCCC
CTTGTCACGCCCAAGTCGTTCAAGCTCTCGGCCAAAGACAAGACGGGAGGCACCGTCAGCACCGAAGTCTCGTTC
AACGAGGCCTCGTTTCTCATCGGCGTCTTCGCCGACCAGGTGGTTCAGTCCGACTTCGGCGCCGCCCAGGCCGCT
GTGGACGATAGAAAGGCAGCGGTCCGCAACGGCACGGCGGCCTTTGTGCTACCGGGCGTGCAGATCATGATCTTC
CCCGTCGGCCTCATCATCACCAGCGTCTGGGTTTTCATCGGCACTACCGCCTACGGTATTGGCACTTACCAGCGG
GCTCTGTACGCAAAGGCCTGGCGCCGGCGGACGAGGTCGGCGGCCCAGGCGGTTGGCAGGTCCATTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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