Protein ID | Ophcf2|05502 |
Gene name | |
Location | scaffold_06:379396..381834 |
Strand | - |
Gene length (bp) | 2438 |
Transcript length (bp) | 2364 |
Coding sequence length (bp) | 2364 |
Protein length (aa) | 788 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11885 | DUF3405 | Protein of unknown function (DUF3405) | 8.8E-192 | 241 | 770 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Golgi apparatus | Signal peptide|Transmembrane domain | 0.1547 | 0.1693 | 0.3804 | 0.0623 | 0.0945 | 0.0155 | 0.4225 | 0.2132 | 0.924 | 0.0248 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 21 | 43 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 3577 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|05502 MGKMLNPPGRRKLMPLPRPRIIFLLALAAATSYLVLFSRHAPHVHMVPYLRDPPAPSPSPSRPDELSETKAEWHV EIDDLRYWRDPTDGENPDDVLPGYETDGKHREPGDVGRLQHEKNLRKMWRYLYMTTAGLKTSNLVYGNTLESLVL KDNRSDELRRPLRDDPRVDLIFAHDKPVRFDPYPDYNSDGWRRDGHAPYVPCKGPTGELVEDLLVFKGRPDKWPA AKFGSYDVLGMDANLCWERETRLGPFGLVQQKKRVGGEYKPVDWDNVDWGNLQQRCLKLNADRFDMQGSSRNEYL AAYPETAGLMQPPRAHVQAQLGHASPAGVAVAASPPPPPSAAQQLARRGTTIRQEAQRDRSPARPGGSVKAKETR TAVLLRSYTGRKYSDNDRQVIRSLVSELSLKTGGQYEVFLLVHSKDPNQRIFDDQEAYLSVLRDNVPAEFRGMTV LWNDEQVANIYTKLTDDEERSVHTAQWLSVQKFSHDHPQFDFIWNWEMDFRFTGHHYDLLDKLASFAKKQPRKYL WERNERWYIPEYHGDYDTAFREQVARRHGDDTVWGPVDLPFVNPVGPKPPVKSHDEDDYEWGVGEEADFITVGPI FDPIDSQWIIGKHVWGFSDARHRSVDLPRRTTIVTQSRISRRLLDAMHVENMRGNHVASEMTPQTIALLHGFKAV FAPHPVFMDRDWTGSFLNSWFNPGPRGECGGRGSPMGWGRERRYQGTTWYYRAEPPNRLYNNWMGWPDTGVGGQA WEEEHGRPCLPSVMLHQVKDTEPTSDDHRTGFDLAFG* |
Coding | >Ophcf2|05502 ATGGGCAAGATGCTCAATCCGCCTGGCCGCCGGAAGCTGATGCCTCTGCCGCGGCCGCGAATCATCTTCCTGCTG GCGCTGGCGGCGGCGACGTCGTACCTGGTCCTCTTCAGTCGTCATGCTCCGCACGTTCACATGGTGCCGTATCTG CGCGATCCGCCTGCGCCTTCGCCTTCGCCTTCCCGCCCGGATGAGCTCTCGGAGACAAAAGCTGAATGGCATGTT GAGATTGACGACTTGCGATACTGGCGCGATCCTACAGACGGCGAGAATCCCGATGACGTCCTGCCCGGTTATGAG ACGGACGGGAAGCATCGTGAGCCTGGTGACGTCGGACGTCTGCAGCATGAGAAGAATCTGCGCAAGATGTGGCGC TATCTCTACATGACGACGGCTGGCCTCAAGACGTCCAACCTCGTTTACGGAAATACGCTCGAGTCGCTGGTCCTC AAGGATAATCGTTCCGACGAGCTGCGACGCCCGTTGAGGGATGACCCGCGCGTCGACCTCATCTTCGCTCATGAC AAGCCCGTCCGCTTCGACCCTTATCCCGATTACAACAGCGACGGCTGGAGACGCGACGGCCATGCCCCCTACGTG CCCTGCAAGGGTCCCACCGGCGAGCTCGTCGAGGACCTGCTCGTCTTCAAGGGCCGTCCCGACAAGTGGCCGGCG GCCAAGTTTGGCAGCTATGACGTGCTCGGCATGGACGCCAACTTGTGTTGGGAGCGCGAGACGCGTCTGGGACCC TTTGGCCTGGTCCAGCAGAAGAAACGGGTGGGCGGCGAGTACAAGCCCGTCGATTGGGACAATGTCGACTGGGGA AACCTCCAGCAGCGCTGCCTCAAGCTCAACGCCGATCGCTTTGACATGCAGGGGTCTAGCAGGAACGAGTATCTG GCAGCCTATCCCGAGACGGCCGGTCTGATGCAGCCGCCGAGGGCCCATGTCCAGGCTCAGCTGGGACACGCGAGC CCGGCCGGTGTTGCCGTCGCCGCCTCTCCTCCGCCTCCACCGTCCGCCGCTCAGCAGCTGGCTCGTCGCGGCACC ACCATCCGGCAGGAAGCCCAACGCGACCGATCCCCGGCGCGGCCAGGAGGGTCGGTCAAGGCCAAGGAGACGAGG ACGGCGGTGCTGCTCCGTTCCTACACGGGCCGCAAGTACTCGGACAACGACAGGCAGGTGATTCGGTCCCTCGTC AGCGAGCTCAGCCTCAAGACGGGCGGCCAATACGAGGTCTTCCTGCTGGTGCACTCCAAGGACCCCAACCAGCGC ATCTTCGACGACCAGGAGGCCTACCTGTCGGTGCTGCGCGACAACGTGCCAGCCGAGTTCCGGGGCATGACGGTG CTGTGGAACGACGAGCAGGTGGCCAACATCTACACCAAGCTGACGGACGACGAGGAGCGCAGCGTCCACACGGCC CAGTGGCTGTCGGTGCAAAAGTTTAGCCACGACCATCCGCAGTTCGACTTCATCTGGAACTGGGAGATGGATTTC CGCTTCACCGGCCACCACTACGATCTCCTCGACAAGCTGGCCAGCTTCGCCAAGAAGCAGCCGCGCAAGTATCTG TGGGAGCGCAACGAGCGCTGGTACATTCCCGAATATCACGGCGACTACGACACCGCGTTCCGCGAGCAGGTGGCG AGGCGTCACGGCGACGATACCGTCTGGGGCCCTGTCGACCTGCCCTTTGTCAACCCGGTCGGGCCCAAGCCGCCG GTCAAGTCGCACGACGAGGACGACTACGAATGGGGCGTGGGCGAGGAGGCCGACTTCATCACCGTCGGCCCCATC TTCGACCCCATCGACAGCCAGTGGATCATAGGGAAGCATGTCTGGGGTTTCAGCGATGCCCGTCACCGGTCCGTC GACCTGCCGCGAAGAACGACCATCGTCACCCAGTCGCGCATCTCGCGCCGTCTGCTCGACGCCATGCACGTCGAG AACATGCGCGGAAACCACGTGGCGTCGGAGATGACGCCCCAGACGATTGCGCTGCTGCACGGTTTCAAGGCCGTC TTCGCGCCTCACCCAGTCTTTATGGATCGCGACTGGACGGGATCCTTCCTCAACAGCTGGTTCAACCCGGGGCCC AGGGGCGAGTGCGGCGGCCGGGGGAGTCCCATGGGATGGGGTCGCGAGCGGAGGTACCAGGGGACGACGTGGTAT TATCGCGCTGAGCCGCCTAACCGGTTGTACAACAACTGGATGGGCTGGCCCGATACGGGCGTCGGGGGACAGGCT TGGGAGGAGGAGCATGGGAGGCCGTGTCTGCCGTCGGTGATGCTGCATCAGGTCAAGGATACGGAGCCGACGAGC GACGATCACCGGACGGGATTCGACTTGGCCTTTGGTTGA |
Transcript | >Ophcf2|05502 ATGGGCAAGATGCTCAATCCGCCTGGCCGCCGGAAGCTGATGCCTCTGCCGCGGCCGCGAATCATCTTCCTGCTG GCGCTGGCGGCGGCGACGTCGTACCTGGTCCTCTTCAGTCGTCATGCTCCGCACGTTCACATGGTGCCGTATCTG CGCGATCCGCCTGCGCCTTCGCCTTCGCCTTCCCGCCCGGATGAGCTCTCGGAGACAAAAGCTGAATGGCATGTT GAGATTGACGACTTGCGATACTGGCGCGATCCTACAGACGGCGAGAATCCCGATGACGTCCTGCCCGGTTATGAG ACGGACGGGAAGCATCGTGAGCCTGGTGACGTCGGACGTCTGCAGCATGAGAAGAATCTGCGCAAGATGTGGCGC TATCTCTACATGACGACGGCTGGCCTCAAGACGTCCAACCTCGTTTACGGAAATACGCTCGAGTCGCTGGTCCTC AAGGATAATCGTTCCGACGAGCTGCGACGCCCGTTGAGGGATGACCCGCGCGTCGACCTCATCTTCGCTCATGAC AAGCCCGTCCGCTTCGACCCTTATCCCGATTACAACAGCGACGGCTGGAGACGCGACGGCCATGCCCCCTACGTG CCCTGCAAGGGTCCCACCGGCGAGCTCGTCGAGGACCTGCTCGTCTTCAAGGGCCGTCCCGACAAGTGGCCGGCG GCCAAGTTTGGCAGCTATGACGTGCTCGGCATGGACGCCAACTTGTGTTGGGAGCGCGAGACGCGTCTGGGACCC TTTGGCCTGGTCCAGCAGAAGAAACGGGTGGGCGGCGAGTACAAGCCCGTCGATTGGGACAATGTCGACTGGGGA AACCTCCAGCAGCGCTGCCTCAAGCTCAACGCCGATCGCTTTGACATGCAGGGGTCTAGCAGGAACGAGTATCTG GCAGCCTATCCCGAGACGGCCGGTCTGATGCAGCCGCCGAGGGCCCATGTCCAGGCTCAGCTGGGACACGCGAGC CCGGCCGGTGTTGCCGTCGCCGCCTCTCCTCCGCCTCCACCGTCCGCCGCTCAGCAGCTGGCTCGTCGCGGCACC ACCATCCGGCAGGAAGCCCAACGCGACCGATCCCCGGCGCGGCCAGGAGGGTCGGTCAAGGCCAAGGAGACGAGG ACGGCGGTGCTGCTCCGTTCCTACACGGGCCGCAAGTACTCGGACAACGACAGGCAGGTGATTCGGTCCCTCGTC AGCGAGCTCAGCCTCAAGACGGGCGGCCAATACGAGGTCTTCCTGCTGGTGCACTCCAAGGACCCCAACCAGCGC ATCTTCGACGACCAGGAGGCCTACCTGTCGGTGCTGCGCGACAACGTGCCAGCCGAGTTCCGGGGCATGACGGTG CTGTGGAACGACGAGCAGGTGGCCAACATCTACACCAAGCTGACGGACGACGAGGAGCGCAGCGTCCACACGGCC CAGTGGCTGTCGGTGCAAAAGTTTAGCCACGACCATCCGCAGTTCGACTTCATCTGGAACTGGGAGATGGATTTC CGCTTCACCGGCCACCACTACGATCTCCTCGACAAGCTGGCCAGCTTCGCCAAGAAGCAGCCGCGCAAGTATCTG TGGGAGCGCAACGAGCGCTGGTACATTCCCGAATATCACGGCGACTACGACACCGCGTTCCGCGAGCAGGTGGCG AGGCGTCACGGCGACGATACCGTCTGGGGCCCTGTCGACCTGCCCTTTGTCAACCCGGTCGGGCCCAAGCCGCCG GTCAAGTCGCACGACGAGGACGACTACGAATGGGGCGTGGGCGAGGAGGCCGACTTCATCACCGTCGGCCCCATC TTCGACCCCATCGACAGCCAGTGGATCATAGGGAAGCATGTCTGGGGTTTCAGCGATGCCCGTCACCGGTCCGTC GACCTGCCGCGAAGAACGACCATCGTCACCCAGTCGCGCATCTCGCGCCGTCTGCTCGACGCCATGCACGTCGAG AACATGCGCGGAAACCACGTGGCGTCGGAGATGACGCCCCAGACGATTGCGCTGCTGCACGGTTTCAAGGCCGTC TTCGCGCCTCACCCAGTCTTTATGGATCGCGACTGGACGGGATCCTTCCTCAACAGCTGGTTCAACCCGGGGCCC AGGGGCGAGTGCGGCGGCCGGGGGAGTCCCATGGGATGGGGTCGCGAGCGGAGGTACCAGGGGACGACGTGGTAT TATCGCGCTGAGCCGCCTAACCGGTTGTACAACAACTGGATGGGCTGGCCCGATACGGGCGTCGGGGGACAGGCT TGGGAGGAGGAGCATGGGAGGCCGTGTCTGCCGTCGGTGATGCTGCATCAGGTCAAGGATACGGAGCCGACGAGC GACGATCACCGGACGGGATTCGACTTGGCCTTTGGTTGA |
Gene | >Ophcf2|05502 ATGGGCAAGATGCTCAATCCGCCTGGCCGCCGGAAGCTGATGCCTCTGCCGCGGCCGCGAATCATCTTCCTGCTG GCGCTGGCGGCGGCGACGTCGTACCTGGTCCTCTTCAGTCGTCATGCTCCGCACGTTCACATGGTGCCGTATCTG CGCGATCCGCCTGCGCCTTCGCCTTCGCCTTCCCGCCCGGATGAGCTCTCGGAGACAAAAGCTGAATGGCATGTT GAGATTGACGACTTGCGATACTGGCGCGATCCTACAGACGGCGAGAATCCCGATGACGTCCTGCCCGGTTATGAG ACGGACGGGAAGCATCGTGAGCCTGGTGACGTCGGACGTCTGCAGCATGAGAAGAATCTGCGCAAGATGTGGCGC TATCTCTACATGACGACGGCTGGGTAAGCTTTCGCTCTCTCCCCTTCCCCCCCCCTAAAATGGTTATTTTTTTTT GTCTTGGCTAACTCCACCTCAGCCTCAAGACGTCCAACCTCGTTTACGGAAATACGCTCGAGTCGCTGGTCCTCA AGGATAATCGTTCCGACGAGCTGCGACGCCCGTTGAGGGATGACCCGCGCGTCGACCTCATCTTCGCTCATGACA AGCCCGTCCGCTTCGACCCTTATCCCGATTACAACAGCGACGGCTGGAGACGCGACGGCCATGCCCCCTACGTGC CCTGCAAGGGTCCCACCGGCGAGCTCGTCGAGGACCTGCTCGTCTTCAAGGGCCGTCCCGACAAGTGGCCGGCGG CCAAGTTTGGCAGCTATGACGTGCTCGGCATGGACGCCAACTTGTGTTGGGAGCGCGAGACGCGTCTGGGACCCT TTGGCCTGGTCCAGCAGAAGAAACGGGTGGGCGGCGAGTACAAGCCCGTCGATTGGGACAATGTCGACTGGGGAA ACCTCCAGCAGCGCTGCCTCAAGCTCAACGCCGATCGCTTTGACATGCAGGGGTCTAGCAGGAACGAGTATCTGG CAGCCTATCCCGAGACGGCCGGTCTGATGCAGCCGCCGAGGGCCCATGTCCAGGCTCAGCTGGGACACGCGAGCC CGGCCGGTGTTGCCGTCGCCGCCTCTCCTCCGCCTCCACCGTCCGCCGCTCAGCAGCTGGCTCGTCGCGGCACCA CCATCCGGCAGGAAGCCCAACGCGACCGATCCCCGGCGCGGCCAGGAGGGTCGGTCAAGGCCAAGGAGACGAGGA CGGCGGTGCTGCTCCGTTCCTACACGGGCCGCAAGTACTCGGACAACGACAGGCAGGTGATTCGGTCCCTCGTCA GCGAGCTCAGCCTCAAGACGGGCGGCCAATACGAGGTCTTCCTGCTGGTGCACTCCAAGGACCCCAACCAGCGCA TCTTCGACGACCAGGAGGCCTACCTGTCGGTGCTGCGCGACAACGTGCCAGCCGAGTTCCGGGGCATGACGGTGC TGTGGAACGACGAGCAGGTGGCCAACATCTACACCAAGCTGACGGACGACGAGGAGCGCAGCGTCCACACGGCCC AGTGGCTGTCGGTGCAAAAGTTTAGCCACGACCATCCGCAGTTCGACTTCATCTGGAACTGGGAGATGGATTTCC GCTTCACCGGCCACCACTACGATCTCCTCGACAAGCTGGCCAGCTTCGCCAAGAAGCAGCCGCGCAAGTATCTGT GGGAGCGCAACGAGCGCTGGTACATTCCCGAATATCACGGCGACTACGACACCGCGTTCCGCGAGCAGGTGGCGA GGCGTCACGGCGACGATACCGTCTGGGGCCCTGTCGACCTGCCCTTTGTCAACCCGGTCGGGCCCAAGCCGCCGG TCAAGTCGCACGACGAGGACGACTACGAATGGGGCGTGGGCGAGGAGGCCGACTTCATCACCGTCGGCCCCATCT TCGACCCCATCGACAGCCAGTGGATCATAGGGAAGCATGTCTGGGGTTTCAGCGATGCCCGTCACCGGTCCGTCG ACCTGCCGCGAAGAACGACCATCGTCACCCAGTCGCGCATCTCGCGCCGTCTGCTCGACGCCATGCACGTCGAGA ACATGCGCGGAAACCACGTGGCGTCGGAGATGACGCCCCAGACGATTGCGCTGCTGCACGGTTTCAAGGCCGTCT TCGCGCCTCACCCAGTCTTTATGGATCGCGACTGGACGGGATCCTTCCTCAACAGCTGGTTCAACCCGGGGCCCA GGGGCGAGTGCGGCGGCCGGGGGAGTCCCATGGGATGGGGTCGCGAGCGGAGGTACCAGGGGACGACGTGGTATT ATCGCGCTGAGCCGCCTAACCGGTTGTACAACAACTGGATGGGCTGGCCCGATACGGGCGTCGGGGGACAGGCTT GGGAGGAGGAGCATGGGAGGCCGTGTCTGCCGTCGGTGATGCTGCATCAGGTCAAGGATACGGAGCCGACGAGCG ACGATCACCGGACGGGATTCGACTTGGCCTTTGGTTGA |