Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05467
Gene name
Locationscaffold_06:230408..231420
Strand+
Gene length (bp)1012
Transcript length (bp)906
Coding sequence length (bp)906
Protein length (aa) 302

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04116 FA_hydroxylase Fatty acid hydroxylase 4.2E-20 170 285

GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0008610 lipid biosynthetic process Yes
GO:0005506 iron ion binding Yes
GO:0006629 lipid metabolic process No
GO:0043169 cation binding No
GO:0005488 binding No
GO:0009058 biosynthetic process No
GO:1901576 organic substance biosynthetic process No
GO:0046872 metal ion binding No
GO:0003674 molecular_function No
GO:0008150 biological_process No
GO:0043167 ion binding No
GO:0003824 catalytic activity No
GO:0008152 metabolic process No
GO:0046914 transition metal ion binding No
GO:0044238 primary metabolic process No
GO:0071704 organic substance metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 68 0.45

Transmembrane Domains

Domain # Start End Length
1 80 102 22
2 128 150 22
3 165 182 17
4 202 221 19
5 231 253 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05467
MEAIIDFLDAAVLDSLYDSARQSLRTSLDSSREKPILRLAKQVCHRTTEVPWTRHAPLRQALTIFLLIWSVPVFH
HNVDLALTTTISIVTHLFYFLFGTICYYQNFDRSLKKSAKFQRSQIRREISDSLLALVCGSFLTAPILVAQLQGH
SRIYRFGSASLWYELAQYPLFVLFSDTCIYWLHRVFHAPVLFRLMHSKHHRYVIPTPFSAYAFHPLEAWIMSLPV
YSFGFIWPMSDVAQLVVFCCSNIWTFLLHDNRDQFHTVHHKNINYNYGQFLHLWDYLGGTYRDAETFLNPVGGYR
A*
Coding >Ophcf2|05467
ATGGAAGCCATCATCGACTTCCTCGACGCAGCCGTCCTCGACTCCCTCTACGACTCTGCCCGTCAGTCCTTACGA
ACTAGCCTCGACTCCTCCCGCGAGAAGCCTATCCTCCGTCTAGCAAAACAAGTCTGCCATCGCACGACAGAAGTC
CCCTGGACAAGACACGCACCTCTCCGTCAAGCACTCACCATCTTTCTCCTCATATGGTCCGTCCCCGTATTCCAT
CACAACGTTGACCTCGCCCTCACCACAACCATCAGCATCGTCACTCACCTCTTCTACTTTCTCTTCGGCACCATC
TGCTACTACCAAAACTTCGACCGCTCTTTGAAGAAGTCTGCCAAGTTCCAACGCTCGCAAATCCGACGCGAAATC
TCCGACTCGCTCCTCGCTCTTGTTTGCGGTAGCTTCCTCACGGCGCCCATTCTCGTAGCTCAGCTGCAGGGTCAC
TCCAGAATCTACCGGTTCGGGTCGGCCAGCTTGTGGTATGAACTGGCGCAGTATCCCCTTTTCGTCTTGTTCAGC
GATACGTGCATCTATTGGCTTCATCGCGTCTTTCACGCGCCTGTACTCTTCAGACTGATGCATAGCAAGCATCAT
CGATATGTCATACCAACCCCCTTCTCAGCCTATGCCTTTCACCCTCTAGAAGCCTGGATCATGAGCCTACCCGTC
TACAGCTTTGGCTTCATCTGGCCAATGTCAGACGTGGCTCAGCTGGTGGTCTTTTGCTGCTCCAATATCTGGACC
TTTTTGCTGCACGATAACCGAGATCAATTTCACACCGTACACCATAAAAACATCAACTACAACTACGGACAGTTC
CTCCACTTATGGGACTATCTAGGGGGCACATATCGAGACGCCGAGACGTTTCTGAATCCTGTCGGCGGCTATAGG
GCATGA
Transcript >Ophcf2|05467
ATGGAAGCCATCATCGACTTCCTCGACGCAGCCGTCCTCGACTCCCTCTACGACTCTGCCCGTCAGTCCTTACGA
ACTAGCCTCGACTCCTCCCGCGAGAAGCCTATCCTCCGTCTAGCAAAACAAGTCTGCCATCGCACGACAGAAGTC
CCCTGGACAAGACACGCACCTCTCCGTCAAGCACTCACCATCTTTCTCCTCATATGGTCCGTCCCCGTATTCCAT
CACAACGTTGACCTCGCCCTCACCACAACCATCAGCATCGTCACTCACCTCTTCTACTTTCTCTTCGGCACCATC
TGCTACTACCAAAACTTCGACCGCTCTTTGAAGAAGTCTGCCAAGTTCCAACGCTCGCAAATCCGACGCGAAATC
TCCGACTCGCTCCTCGCTCTTGTTTGCGGTAGCTTCCTCACGGCGCCCATTCTCGTAGCTCAGCTGCAGGGTCAC
TCCAGAATCTACCGGTTCGGGTCGGCCAGCTTGTGGTATGAACTGGCGCAGTATCCCCTTTTCGTCTTGTTCAGC
GATACGTGCATCTATTGGCTTCATCGCGTCTTTCACGCGCCTGTACTCTTCAGACTGATGCATAGCAAGCATCAT
CGATATGTCATACCAACCCCCTTCTCAGCCTATGCCTTTCACCCTCTAGAAGCCTGGATCATGAGCCTACCCGTC
TACAGCTTTGGCTTCATCTGGCCAATGTCAGACGTGGCTCAGCTGGTGGTCTTTTGCTGCTCCAATATCTGGACC
TTTTTGCTGCACGATAACCGAGATCAATTTCACACCGTACACCATAAAAACATCAACTACAACTACGGACAGTTC
CTCCACTTATGGGACTATCTAGGGGGCACATATCGAGACGCCGAGACGTTTCTGAATCCTGTCGGCGGCTATAGG
GCATGA
Gene >Ophcf2|05467
ATGGAAGCCATCATCGACTTCCTCGACGCAGCCGTCCTCGACTCCCTCTACGACTCTGCCCGTCAGTCCTTACGA
ACTAGCCTCGACTCCTCCCGCGAGAAGCCTATCCTCCGTCTAGCAAAACAAGTCTGCCATCGCACGACAGAAGTC
CCCTGGACAAGACACGCACCTCTCCGTCAAGCACTCACCATCTTTCTCCTCATATGGTCCGTCCCCGTATTCCAT
CACAACGTTGACCTCGCCCTCACCACAACCATCAGCATCGTCACTCACCTCTTCTACTTTCTCTTCGGCACCATC
TGCTACTACCAAAACTTCGACCGCTCTTTGAAGAAGTCTGCCAAGTTCCAACGCTCGCAAATCCGACGCGAAATC
TCCGACTCGCTCCTCGCTCTTGTTTGCGGTAGCTTCCTCACGGCGCCCATTCTCGTAGCTCAGCTGCAGGGTCAC
TCCAGAATCTACCGGTTCGGGTCGGCCAGCTTGTGGTATGAACTGGCGCAGTATCCCCTTTTCGTCTTGTTCAGC
GATACGTGCATCTATTGGCTTCATCGCGTCTTTCACGCGCCTGTACTCTTCAGACTGATGCATAGCAAGCATCAT
CGGTGAGATCAGGCCTCTCAATTGCGCAGTCTCTCATAGCTGACCATCTGAGAATATAGATATGTCATACCAACC
CCCTTCTCAGCCTATGCCTTTCACCCTCTAGAAGCCTGGATCATGAGCCTACCCGTCTACAGCTTTGGCTTCATC
TGGCCAATGTCAGACGTGGCTCAGCTGGTGGTCTTTTGCTGCTCCAATATCTGGACCTTTTTGCTGCGTAGGTTT
CGAATCATCTCCCAGAGTTGAGGAGATTTCTGACCTTTCAGACGATAACCGAGATCAATTTCACACCGTACACCA
TAAAAACATCAACTACAACTACGGACAGTTCCTCCACTTATGGGACTATCTAGGGGGCACATATCGAGACGCCGA
GACGTTTCTGAATCCTGTCGGCGGCTATAGGGCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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