Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05452
Gene name
Locationscaffold_06:199351..200476
Strand-
Gene length (bp)1125
Transcript length (bp)1074
Coding sequence length (bp)1074
Protein length (aa) 358

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00226 DnaJ DnaJ domain 9.6E-10 77 137

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 49 68 19
3 159 181 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05452
MSQSFSMIGWYILPGLATSVIQTIYYGLTIRAGDPKPAPESARHAVHRRHIKMAVVVIYLLYTIFEAYHDIRADP
SYYEELGVPLDAGEREIRSRFRRVAAMHHPDKTGSDDDGFFFMHLKAVSDTLQHSAKRFAYERFGPSVLTWTECV
TIREFVTRGFLLSILPHYSIAAATIYLLGLTGYMETAKLHRWLMLVGLCLFELHAVTRPEFPAVVRVVNAVATRL
PPYTPLLPFQVVKLAQKLVLTLCIGIAQIGPLLAEQSAARRRAGPRDEKLLQLALDRLEVASGQLDTETTRMVAL
EMAPFKGDDMAVRNLRDKMREWLVQNTIRADPMVRDAMGTSLRRRRIDAPSGARGTR*
Coding >Ophcf2|05452
ATGTCCCAATCCTTTTCCATGATCGGATGGTACATCTTACCCGGCCTCGCTACTTCGGTGATCCAGACCATCTAC
TATGGCCTCACGATCCGCGCAGGCGACCCTAAGCCCGCGCCCGAATCGGCCCGTCATGCCGTCCACCGTCGCCAC
ATCAAGATGGCCGTCGTGGTAATCTATCTGCTGTACACAATCTTCGAGGCCTATCACGATATCCGTGCCGACCCG
TCGTACTACGAGGAACTCGGCGTGCCGCTCGACGCGGGCGAGCGCGAGATTCGCTCCCGCTTTCGCAGGGTCGCC
GCCATGCATCACCCGGATAAGACTGGTAGCGACGACGACGGCTTCTTCTTTATGCATCTCAAGGCCGTAAGCGAC
ACACTACAGCACAGCGCCAAACGCTTCGCCTACGAACGTTTCGGCCCGTCCGTCCTCACATGGACCGAGTGCGTC
ACCATCCGCGAGTTCGTCACCAGGGGCTTTCTTCTTTCAATCCTCCCACACTATTCCATCGCCGCCGCTACCATC
TATCTCCTCGGCCTCACCGGTTACATGGAGACGGCCAAGCTTCACCGCTGGTTGATGCTCGTTGGCCTCTGCCTC
TTTGAGCTTCACGCCGTTACCAGGCCCGAGTTCCCCGCCGTCGTCCGCGTCGTCAACGCTGTCGCTACCCGTCTT
CCGCCTTATACCCCCTTGCTCCCCTTTCAGGTCGTCAAGCTCGCTCAGAAGCTCGTTCTCACCCTCTGCATCGGT
ATCGCCCAGATTGGGCCCCTCTTGGCCGAGCAGTCGGCTGCCCGCCGTCGCGCCGGCCCTCGCGACGAAAAGCTC
TTGCAGCTGGCTCTTGACCGCCTCGAGGTTGCGTCCGGCCAGCTGGACACCGAGACGACTCGCATGGTGGCGCTT
GAAATGGCGCCTTTCAAGGGCGACGACATGGCTGTTCGCAACCTCCGGGACAAGATGCGCGAGTGGCTGGTTCAA
AATACGATACGTGCCGATCCCATGGTCCGGGATGCCATGGGAACCTCGTTGAGGAGAAGAAGAATAGATGCGCCG
AGTGGTGCCAGGGGGACCAGATAG
Transcript >Ophcf2|05452
ATGTCCCAATCCTTTTCCATGATCGGATGGTACATCTTACCCGGCCTCGCTACTTCGGTGATCCAGACCATCTAC
TATGGCCTCACGATCCGCGCAGGCGACCCTAAGCCCGCGCCCGAATCGGCCCGTCATGCCGTCCACCGTCGCCAC
ATCAAGATGGCCGTCGTGGTAATCTATCTGCTGTACACAATCTTCGAGGCCTATCACGATATCCGTGCCGACCCG
TCGTACTACGAGGAACTCGGCGTGCCGCTCGACGCGGGCGAGCGCGAGATTCGCTCCCGCTTTCGCAGGGTCGCC
GCCATGCATCACCCGGATAAGACTGGTAGCGACGACGACGGCTTCTTCTTTATGCATCTCAAGGCCGTAAGCGAC
ACACTACAGCACAGCGCCAAACGCTTCGCCTACGAACGTTTCGGCCCGTCCGTCCTCACATGGACCGAGTGCGTC
ACCATCCGCGAGTTCGTCACCAGGGGCTTTCTTCTTTCAATCCTCCCACACTATTCCATCGCCGCCGCTACCATC
TATCTCCTCGGCCTCACCGGTTACATGGAGACGGCCAAGCTTCACCGCTGGTTGATGCTCGTTGGCCTCTGCCTC
TTTGAGCTTCACGCCGTTACCAGGCCCGAGTTCCCCGCCGTCGTCCGCGTCGTCAACGCTGTCGCTACCCGTCTT
CCGCCTTATACCCCCTTGCTCCCCTTTCAGGTCGTCAAGCTCGCTCAGAAGCTCGTTCTCACCCTCTGCATCGGT
ATCGCCCAGATTGGGCCCCTCTTGGCCGAGCAGTCGGCTGCCCGCCGTCGCGCCGGCCCTCGCGACGAAAAGCTC
TTGCAGCTGGCTCTTGACCGCCTCGAGGTTGCGTCCGGCCAGCTGGACACCGAGACGACTCGCATGGTGGCGCTT
GAAATGGCGCCTTTCAAGGGCGACGACATGGCTGTTCGCAACCTCCGGGACAAGATGCGCGAGTGGCTGGTTCAA
AATACGATACGTGCCGATCCCATGGTCCGGGATGCCATGGGAACCTCGTTGAGGAGAAGAAGAATAGATGCGCCG
AGTGGTGCCAGGGGGACCAGATAG
Gene >Ophcf2|05452
ATGTCCCAATCCTTTTCCATGATCGGATGGTACATCTTACCCGGCGTGCGTCTCTCTCTCGTCTCTCTTGACTGG
CAGCAGCTGACCTTCTCATAGCTCGCTACTTCGGTGATCCAGACCATCTACTATGGCCTCACGATCCGCGCAGGC
GACCCTAAGCCCGCGCCCGAATCGGCCCGTCATGCCGTCCACCGTCGCCACATCAAGATGGCCGTCGTGGTAATC
TATCTGCTGTACACAATCTTCGAGGCCTATCACGATATCCGTGCCGACCCGTCGTACTACGAGGAACTCGGCGTG
CCGCTCGACGCGGGCGAGCGCGAGATTCGCTCCCGCTTTCGCAGGGTCGCCGCCATGCATCACCCGGATAAGACT
GGTAGCGACGACGACGGCTTCTTCTTTATGCATCTCAAGGCCGTAAGCGACACACTACAGCACAGCGCCAAACGC
TTCGCCTACGAACGTTTCGGCCCGTCCGTCCTCACATGGACCGAGTGCGTCACCATCCGCGAGTTCGTCACCAGG
GGCTTTCTTCTTTCAATCCTCCCACACTATTCCATCGCCGCCGCTACCATCTATCTCCTCGGCCTCACCGGTTAC
ATGGAGACGGCCAAGCTTCACCGCTGGTTGATGCTCGTTGGCCTCTGCCTCTTTGAGCTTCACGCCGTTACCAGG
CCCGAGTTCCCCGCCGTCGTCCGCGTCGTCAACGCTGTCGCTACCCGTCTTCCGCCTTATACCCCCTTGCTCCCC
TTTCAGGTCGTCAAGCTCGCTCAGAAGCTCGTTCTCACCCTCTGCATCGGTATCGCCCAGATTGGGCCCCTCTTG
GCCGAGCAGTCGGCTGCCCGCCGTCGCGCCGGCCCTCGCGACGAAAAGCTCTTGCAGCTGGCTCTTGACCGCCTC
GAGGTTGCGTCCGGCCAGCTGGACACCGAGACGACTCGCATGGTGGCGCTTGAAATGGCGCCTTTCAAGGGCGAC
GACATGGCTGTTCGCAACCTCCGGGACAAGATGCGCGAGTGGCTGGTTCAAAATACGATACGTGCCGATCCCATG
GTCCGGGATGCCATGGGAACCTCGTTGAGGAGAAGAAGAATAGATGCGCCGAGTGGTGCCAGGGGGACCAGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail