Protein ID | Ophcf2|05452 |
Gene name | |
Location | scaffold_06:199351..200476 |
Strand | - |
Gene length (bp) | 1125 |
Transcript length (bp) | 1074 |
Coding sequence length (bp) | 1074 |
Protein length (aa) | 358 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00226 | DnaJ | DnaJ domain | 9.6E-10 | 77 | 137 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 18 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 29 | 22 |
2 | 49 | 68 | 19 |
3 | 159 | 181 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|05452 MSQSFSMIGWYILPGLATSVIQTIYYGLTIRAGDPKPAPESARHAVHRRHIKMAVVVIYLLYTIFEAYHDIRADP SYYEELGVPLDAGEREIRSRFRRVAAMHHPDKTGSDDDGFFFMHLKAVSDTLQHSAKRFAYERFGPSVLTWTECV TIREFVTRGFLLSILPHYSIAAATIYLLGLTGYMETAKLHRWLMLVGLCLFELHAVTRPEFPAVVRVVNAVATRL PPYTPLLPFQVVKLAQKLVLTLCIGIAQIGPLLAEQSAARRRAGPRDEKLLQLALDRLEVASGQLDTETTRMVAL EMAPFKGDDMAVRNLRDKMREWLVQNTIRADPMVRDAMGTSLRRRRIDAPSGARGTR* |
Coding | >Ophcf2|05452 ATGTCCCAATCCTTTTCCATGATCGGATGGTACATCTTACCCGGCCTCGCTACTTCGGTGATCCAGACCATCTAC TATGGCCTCACGATCCGCGCAGGCGACCCTAAGCCCGCGCCCGAATCGGCCCGTCATGCCGTCCACCGTCGCCAC ATCAAGATGGCCGTCGTGGTAATCTATCTGCTGTACACAATCTTCGAGGCCTATCACGATATCCGTGCCGACCCG TCGTACTACGAGGAACTCGGCGTGCCGCTCGACGCGGGCGAGCGCGAGATTCGCTCCCGCTTTCGCAGGGTCGCC GCCATGCATCACCCGGATAAGACTGGTAGCGACGACGACGGCTTCTTCTTTATGCATCTCAAGGCCGTAAGCGAC ACACTACAGCACAGCGCCAAACGCTTCGCCTACGAACGTTTCGGCCCGTCCGTCCTCACATGGACCGAGTGCGTC ACCATCCGCGAGTTCGTCACCAGGGGCTTTCTTCTTTCAATCCTCCCACACTATTCCATCGCCGCCGCTACCATC TATCTCCTCGGCCTCACCGGTTACATGGAGACGGCCAAGCTTCACCGCTGGTTGATGCTCGTTGGCCTCTGCCTC TTTGAGCTTCACGCCGTTACCAGGCCCGAGTTCCCCGCCGTCGTCCGCGTCGTCAACGCTGTCGCTACCCGTCTT CCGCCTTATACCCCCTTGCTCCCCTTTCAGGTCGTCAAGCTCGCTCAGAAGCTCGTTCTCACCCTCTGCATCGGT ATCGCCCAGATTGGGCCCCTCTTGGCCGAGCAGTCGGCTGCCCGCCGTCGCGCCGGCCCTCGCGACGAAAAGCTC TTGCAGCTGGCTCTTGACCGCCTCGAGGTTGCGTCCGGCCAGCTGGACACCGAGACGACTCGCATGGTGGCGCTT GAAATGGCGCCTTTCAAGGGCGACGACATGGCTGTTCGCAACCTCCGGGACAAGATGCGCGAGTGGCTGGTTCAA AATACGATACGTGCCGATCCCATGGTCCGGGATGCCATGGGAACCTCGTTGAGGAGAAGAAGAATAGATGCGCCG AGTGGTGCCAGGGGGACCAGATAG |
Transcript | >Ophcf2|05452 ATGTCCCAATCCTTTTCCATGATCGGATGGTACATCTTACCCGGCCTCGCTACTTCGGTGATCCAGACCATCTAC TATGGCCTCACGATCCGCGCAGGCGACCCTAAGCCCGCGCCCGAATCGGCCCGTCATGCCGTCCACCGTCGCCAC ATCAAGATGGCCGTCGTGGTAATCTATCTGCTGTACACAATCTTCGAGGCCTATCACGATATCCGTGCCGACCCG TCGTACTACGAGGAACTCGGCGTGCCGCTCGACGCGGGCGAGCGCGAGATTCGCTCCCGCTTTCGCAGGGTCGCC GCCATGCATCACCCGGATAAGACTGGTAGCGACGACGACGGCTTCTTCTTTATGCATCTCAAGGCCGTAAGCGAC ACACTACAGCACAGCGCCAAACGCTTCGCCTACGAACGTTTCGGCCCGTCCGTCCTCACATGGACCGAGTGCGTC ACCATCCGCGAGTTCGTCACCAGGGGCTTTCTTCTTTCAATCCTCCCACACTATTCCATCGCCGCCGCTACCATC TATCTCCTCGGCCTCACCGGTTACATGGAGACGGCCAAGCTTCACCGCTGGTTGATGCTCGTTGGCCTCTGCCTC TTTGAGCTTCACGCCGTTACCAGGCCCGAGTTCCCCGCCGTCGTCCGCGTCGTCAACGCTGTCGCTACCCGTCTT CCGCCTTATACCCCCTTGCTCCCCTTTCAGGTCGTCAAGCTCGCTCAGAAGCTCGTTCTCACCCTCTGCATCGGT ATCGCCCAGATTGGGCCCCTCTTGGCCGAGCAGTCGGCTGCCCGCCGTCGCGCCGGCCCTCGCGACGAAAAGCTC TTGCAGCTGGCTCTTGACCGCCTCGAGGTTGCGTCCGGCCAGCTGGACACCGAGACGACTCGCATGGTGGCGCTT GAAATGGCGCCTTTCAAGGGCGACGACATGGCTGTTCGCAACCTCCGGGACAAGATGCGCGAGTGGCTGGTTCAA AATACGATACGTGCCGATCCCATGGTCCGGGATGCCATGGGAACCTCGTTGAGGAGAAGAAGAATAGATGCGCCG AGTGGTGCCAGGGGGACCAGATAG |
Gene | >Ophcf2|05452 ATGTCCCAATCCTTTTCCATGATCGGATGGTACATCTTACCCGGCGTGCGTCTCTCTCTCGTCTCTCTTGACTGG CAGCAGCTGACCTTCTCATAGCTCGCTACTTCGGTGATCCAGACCATCTACTATGGCCTCACGATCCGCGCAGGC GACCCTAAGCCCGCGCCCGAATCGGCCCGTCATGCCGTCCACCGTCGCCACATCAAGATGGCCGTCGTGGTAATC TATCTGCTGTACACAATCTTCGAGGCCTATCACGATATCCGTGCCGACCCGTCGTACTACGAGGAACTCGGCGTG CCGCTCGACGCGGGCGAGCGCGAGATTCGCTCCCGCTTTCGCAGGGTCGCCGCCATGCATCACCCGGATAAGACT GGTAGCGACGACGACGGCTTCTTCTTTATGCATCTCAAGGCCGTAAGCGACACACTACAGCACAGCGCCAAACGC TTCGCCTACGAACGTTTCGGCCCGTCCGTCCTCACATGGACCGAGTGCGTCACCATCCGCGAGTTCGTCACCAGG GGCTTTCTTCTTTCAATCCTCCCACACTATTCCATCGCCGCCGCTACCATCTATCTCCTCGGCCTCACCGGTTAC ATGGAGACGGCCAAGCTTCACCGCTGGTTGATGCTCGTTGGCCTCTGCCTCTTTGAGCTTCACGCCGTTACCAGG CCCGAGTTCCCCGCCGTCGTCCGCGTCGTCAACGCTGTCGCTACCCGTCTTCCGCCTTATACCCCCTTGCTCCCC TTTCAGGTCGTCAAGCTCGCTCAGAAGCTCGTTCTCACCCTCTGCATCGGTATCGCCCAGATTGGGCCCCTCTTG GCCGAGCAGTCGGCTGCCCGCCGTCGCGCCGGCCCTCGCGACGAAAAGCTCTTGCAGCTGGCTCTTGACCGCCTC GAGGTTGCGTCCGGCCAGCTGGACACCGAGACGACTCGCATGGTGGCGCTTGAAATGGCGCCTTTCAAGGGCGAC GACATGGCTGTTCGCAACCTCCGGGACAAGATGCGCGAGTGGCTGGTTCAAAATACGATACGTGCCGATCCCATG GTCCGGGATGCCATGGGAACCTCGTTGAGGAGAAGAAGAATAGATGCGCCGAGTGGTGCCAGGGGGACCAGATAG |