Protein ID | Ophcf2|05429 |
Gene name | |
Location | scaffold_06:111553..112984 |
Strand | - |
Gene length (bp) | 1431 |
Transcript length (bp) | 1164 |
Coding sequence length (bp) | 1164 |
Protein length (aa) | 388 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08240 | ADH_N | Alcohol dehydrogenase GroES-like domain | 1.6E-25 | 41 | 125 |
PF00107 | ADH_zinc_N | Zinc-binding dehydrogenase | 1.4E-19 | 211 | 341 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 14 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|05429 MQQNAMPSTAGTTIKCKAAVAWEAGKDLTMEEVEVAPPKAHEVRIEVYYTGVCHTDAYTLSGKDPEGAFPVILGH EGAGIVESVGEGVTDVKPGDHVVALYTPECKECKFCKSGKTNLCGKIRTSQGKGVMPDGTTRFRCRGKDLLHYMG TSTFSQFTVVADISVVAVQPDAPMDRTCLLGCGVTTGYGAARVTAKVEAGSSVAVFGAGCVGLSVVQGALINKAG SIIVVDVNPAKESWARKFGATDFVNPNELPEGESIVDRLISMTDGGCDYTFDCTGNVKIMRAALEACHKGWGESI IIGVAAAGQEISTRPFQLVTGRVWKGCAFGGIKGRSQMKELVSDYLKGALKVDEFITHRKTLADINAAFEAMKGG DCIRCVVDMRKT* |
Coding | >Ophcf2|05429 ATGCAGCAAAACGCCATGCCTTCGACCGCCGGCACGACCATCAAATGCAAGGCCGCCGTCGCCTGGGAGGCGGGC AAGGACCTGACCATGGAGGAGGTTGAAGTTGCGCCTCCCAAGGCCCACGAGGTCCGCATCGAAGTCTACTACACG GGTGTCTGTCATACCGATGCCTACACGCTATCTGGAAAAGACCCCGAGGGCGCGTTCCCCGTCATTCTCGGCCAT GAAGGCGCAGGCATCGTCGAGTCCGTGGGCGAAGGCGTAACGGACGTCAAGCCCGGCGACCACGTTGTCGCCCTC TACACGCCCGAATGCAAGGAATGCAAGTTTTGCAAATCCGGAAAGACGAACCTCTGTGGCAAGATTCGCACGTCT CAGGGGAAAGGCGTCATGCCCGATGGCACCACACGCTTCCGCTGCCGCGGCAAGGACCTCCTCCATTACATGGGA ACGTCAACCTTTTCGCAGTTCACCGTCGTGGCCGACATCTCCGTCGTGGCCGTCCAGCCGGATGCGCCCATGGAC CGCACGTGCCTTCTCGGCTGCGGCGTCACGACGGGTTACGGCGCAGCGCGGGTGACGGCCAAGGTCGAAGCCGGT TCGTCCGTCGCCGTCTTCGGAGCCGGCTGCGTCGGACTCTCCGTTGTCCAAGGCGCCCTCATCAACAAGGCGGGA TCCATCATCGTCGTCGACGTAAATCCTGCCAAGGAGTCGTGGGCTCGCAAGTTTGGCGCCACCGACTTTGTGAAC CCCAATGAGCTTCCCGAGGGCGAGTCCATCGTCGATCGTCTCATTAGCATGACGGACGGCGGCTGCGATTACACC TTTGACTGCACAGGCAACGTCAAAATCATGCGTGCCGCCCTCGAGGCTTGCCACAAGGGTTGGGGTGAGAGCATC ATCATCGGCGTCGCCGCTGCCGGTCAGGAGATTTCCACGCGGCCATTCCAGCTCGTCACCGGCCGCGTGTGGAAG GGCTGCGCCTTTGGCGGCATCAAGGGCCGGTCGCAGATGAAGGAACTGGTGAGCGACTACCTCAAGGGCGCTCTC AAGGTGGACGAGTTCATCACACACCGCAAGACGCTAGCCGACATCAACGCCGCCTTTGAGGCCATGAAGGGCGGT GACTGCATCCGGTGTGTCGTCGACATGCGCAAGACCTGA |
Transcript | >Ophcf2|05429 ATGCAGCAAAACGCCATGCCTTCGACCGCCGGCACGACCATCAAATGCAAGGCCGCCGTCGCCTGGGAGGCGGGC AAGGACCTGACCATGGAGGAGGTTGAAGTTGCGCCTCCCAAGGCCCACGAGGTCCGCATCGAAGTCTACTACACG GGTGTCTGTCATACCGATGCCTACACGCTATCTGGAAAAGACCCCGAGGGCGCGTTCCCCGTCATTCTCGGCCAT GAAGGCGCAGGCATCGTCGAGTCCGTGGGCGAAGGCGTAACGGACGTCAAGCCCGGCGACCACGTTGTCGCCCTC TACACGCCCGAATGCAAGGAATGCAAGTTTTGCAAATCCGGAAAGACGAACCTCTGTGGCAAGATTCGCACGTCT CAGGGGAAAGGCGTCATGCCCGATGGCACCACACGCTTCCGCTGCCGCGGCAAGGACCTCCTCCATTACATGGGA ACGTCAACCTTTTCGCAGTTCACCGTCGTGGCCGACATCTCCGTCGTGGCCGTCCAGCCGGATGCGCCCATGGAC CGCACGTGCCTTCTCGGCTGCGGCGTCACGACGGGTTACGGCGCAGCGCGGGTGACGGCCAAGGTCGAAGCCGGT TCGTCCGTCGCCGTCTTCGGAGCCGGCTGCGTCGGACTCTCCGTTGTCCAAGGCGCCCTCATCAACAAGGCGGGA TCCATCATCGTCGTCGACGTAAATCCTGCCAAGGAGTCGTGGGCTCGCAAGTTTGGCGCCACCGACTTTGTGAAC CCCAATGAGCTTCCCGAGGGCGAGTCCATCGTCGATCGTCTCATTAGCATGACGGACGGCGGCTGCGATTACACC TTTGACTGCACAGGCAACGTCAAAATCATGCGTGCCGCCCTCGAGGCTTGCCACAAGGGTTGGGGTGAGAGCATC ATCATCGGCGTCGCCGCTGCCGGTCAGGAGATTTCCACGCGGCCATTCCAGCTCGTCACCGGCCGCGTGTGGAAG GGCTGCGCCTTTGGCGGCATCAAGGGCCGGTCGCAGATGAAGGAACTGGTGAGCGACTACCTCAAGGGCGCTCTC AAGGTGGACGAGTTCATCACACACCGCAAGACGCTAGCCGACATCAACGCCGCCTTTGAGGCCATGAAGGGCGGT GACTGCATCCGGTGTGTCGTCGACATGCGCAAGACCTGA |
Gene | >Ophcf2|05429 ATGCAGCAAAACGCCATGCCTTCGACCGCCGGCACGGTAGGTACCTACATACCCTCACCACCACAATTACACCAC ATCCAGTCTCTCGCTGACGCCGCCAGACCATCAAATGCAAGGCCGCCGTCGCCTGGGAGGCGGGCAAGGACCTGA CCATGGAGGAGGTTGAAGTTGCGCCTCCCAAGGCCCACGAGGTCCGCATCGAAGTCTACTACACGGGTGTCTGTC ATACCGGTATGTTTATTTCTCAAGCTGAAGAGGGAAGACGCTGAAAGGGGGGGAATCTCGTCGGCAGATGCCTAC ACGCTATCTGGAAAAGACCCCGAGGGCGCGTTCCCCGTCATTCTCGGCCATGAAGGCGCAGGCATCGTCGAGTCC GTGGGCGAAGGCGTAACGGACGTCAAGCCCGGCGACCACGTTGTCGCCCTCTAGTCCGTCACCATTGTTCATATC ATCTACTTCCTCTCCCAATCCGGTATAATACGCTGACGACCAGGTTTCGCCTGAAAGCACGCCCGAATGCAAGGA ATGCAAGTTTTGCAAATCCGGAAAGACGAACCTCTGTGGCAAGATTCGCACGTCTCAGGGGAAAGGCGTCATGCC CGATGGCACCACACGCTTCCGCTGCCGCGGCAAGGACCTCCTCCATTACATGGGAACGTCAACCTTTTCGCAGTT CACCGTCGTGGCCGACATCTCCGTCGTGGCCGTCCAGCCGGATGCGCCCATGGACCGCACGTGCCTTCTCGGCTG CGGCGTCACGACGGGTTACGGCGCAGCGCGGGTGACGGCCAAGGTCGAAGCCGGTTCGTCCGTCGCCGTCTTCGG AGCCGGCTGCGTCGGACTCTCCGTTGTCCAAGGCGCCCTCATCAACAAGGCGGGATCCATCATCGTCGTCGACGT AAATCCTGCCAAGGAGTCGTGGGCTCGCAAGTTTGGCGCCACCGACTTTGTGAACCCCAATGAGCTTCCCGAGGG CGAGTCCATCGTCGATCGTCTCATTAGCATGACGGACGGCGGCTGCGATTACACCTTTGACTGCACAGGCAACGT CAAAATCATGCGTGCCGCCCTCGAGGCTTGCCACAAGGGTTGGGGTGAGAGCATCATCATCGGCGTCGCCGCTGC CGGTCAGGAGATTTCCACGCGGCGTAAGACCCTCCCATCGCTTTCAAATGCCCGAGGTTCGTATCTGACGCTTCT CCCTTGATAGCATTCCAGCTCGTCACCGGCCGCGTGTGGAAGGGCTGCGCCTTTGGCGGCATCAAGGGCCGGTCG CAGATGAAGGAACTGGTGAGCGACTACCTCAAGGGCGCTCTCAAGGTGGACGAGTTCATCACACACCGCAAGACG CTAGCCGACATCAACGCCGCCTTTGAGGCCATGAAGGGCGGTGACTGCATCCGGTGTGTCGTCGACATGCGCAAG ACCTGA |