Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05427
Gene name
Locationscaffold_06:107320..108341
Strand-
Gene length (bp)1021
Transcript length (bp)963
Coding sequence length (bp)963
Protein length (aa) 321

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00730 HhH-GPD HhH-GPD superfamily base excision DNA repair protein 1.6E-17 132 277
PF00633 HHH Helix-hairpin-helix motif 5.4E-07 209 235

GO

GO Term Description Terminal node
GO:0006284 base-excision repair Yes
GO:0003677 DNA binding Yes
GO:0097159 organic cyclic compound binding No
GO:0071704 organic substance metabolic process No
GO:0044237 cellular metabolic process No
GO:0009987 cellular process No
GO:0003676 nucleic acid binding No
GO:1901363 heterocyclic compound binding No
GO:0008152 metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0005488 binding No
GO:0051716 cellular response to stimulus No
GO:0044260 cellular macromolecule metabolic process No
GO:0006259 DNA metabolic process No
GO:0043170 macromolecule metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0050896 response to stimulus No
GO:0006725 cellular aromatic compound metabolic process No
GO:0044238 primary metabolic process No
GO:0033554 cellular response to stress No
GO:0006807 nitrogen compound metabolic process No
GO:0003674 molecular_function No
GO:0090304 nucleic acid metabolic process No
GO:0006974 cellular response to DNA damage stimulus No
GO:0006950 response to stress No
GO:0006281 DNA repair No
GO:0008150 biological_process No
GO:0034641 cellular nitrogen compound metabolic process No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.1036 0.9425 0.1168 0.0165 0.3563 0.0629 0.0361 0.0079 0.0351 0.0139

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup105
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1376
Ophiocordyceps australis 1348a (Ghana) OphauG2|5000
Ophiocordyceps australis map64 (Brazil) OphauB2|2330
Ophiocordyceps australis map64 (Brazil) OphauB2|6638
Ophiocordyceps camponoti-floridani Ophcf2|02415
Ophiocordyceps camponoti-floridani Ophcf2|05427 (this protein)
Ophiocordyceps camponoti-floridani Ophcf2|05428
Ophiocordyceps camponoti-rufipedis Ophun1|2176
Ophiocordyceps camponoti-rufipedis Ophun1|6758
Ophiocordyceps kimflemingae Ophio5|1176
Ophiocordyceps kimflemingae Ophio5|1177
Ophiocordyceps kimflemingae Ophio5|4504
Ophiocordyceps subramaniannii Hirsu2|6059
Ophiocordyceps subramaniannii Hirsu2|667
Ophiocordyceps subramaniannii Hirsu2|826
Ophiocordyceps subramaniannii Hirsu2|9048

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05427
MAPGRITRSASRAAAATATAKVVRDVTKTTTKTTTKTTMVAMTTATVVDMEDAVGPPAKRRKRQPATKATTTATT
TATTATAPAGWHETYEAVRRMRSPGGVAHGAPVDTMGCERLADRQASAKDQRFQTLVALMLSSQTKDTVNAAAMH
RLKTELRPSRHGATAGLTVDNILAADPAVLNGLIWAVGFHNNKTKHLQQTAAVLRDSWDGDIPDTMAGLTALPGV
GPKMAYLCMSAAWGRTEGIGVDVHVHRITNLWGWQRTRNPEETRRALEAWLPRDRWHEINGLLVGLGQVVCRPVG
RRCGECELGQRGLCRAAKRS*
Coding >Ophcf2|05427
ATGGCGCCCGGACGTATTACTCGATCGGCCTCGCGGGCCGCGGCGGCGACGGCCACGGCGAAGGTGGTACGGGAT
GTGACAAAGACGACAACGAAGACGACAACGAAGACGACGATGGTGGCGATGACGACAGCGACGGTGGTGGACATG
GAAGACGCCGTCGGCCCTCCCGCTAAGCGCCGCAAACGACAGCCGGCGACGAAGGCGACGACGACGGCGACGACG
ACGGCGACGACGGCGACTGCGCCCGCCGGCTGGCATGAGACATACGAGGCGGTGCGACGGATGCGGTCGCCCGGA
GGCGTGGCTCACGGCGCCCCGGTCGATACCATGGGCTGCGAGCGGCTGGCCGACAGACAGGCGTCGGCCAAGGAC
CAGCGCTTCCAAACGCTGGTGGCGCTGATGCTTTCAAGCCAGACCAAGGACACGGTCAACGCGGCGGCCATGCAC
CGGCTCAAGACGGAGCTGCGGCCGTCTAGGCACGGGGCTACGGCCGGGTTGACGGTGGATAATATACTGGCGGCG
GACCCGGCGGTGCTGAACGGGTTGATTTGGGCCGTGGGGTTTCACAACAACAAGACGAAACACCTACAACAGACG
GCGGCGGTGCTACGCGACAGCTGGGACGGAGACATCCCCGACACCATGGCCGGACTGACGGCACTGCCCGGCGTG
GGTCCCAAGATGGCCTACCTCTGCATGTCGGCGGCATGGGGCCGGACCGAGGGCATCGGTGTCGACGTACACGTG
CACCGCATCACCAACCTCTGGGGCTGGCAGCGGACGCGCAATCCGGAGGAGACGAGGCGGGCGCTCGAGGCCTGG
CTGCCGCGGGATCGGTGGCACGAGATCAACGGGCTGTTGGTCGGACTGGGCCAGGTCGTCTGTCGTCCTGTAGGA
AGGCGGTGCGGCGAGTGCGAGCTGGGACAGCGAGGCCTGTGCCGGGCAGCGAAGCGGTCATGA
Transcript >Ophcf2|05427
ATGGCGCCCGGACGTATTACTCGATCGGCCTCGCGGGCCGCGGCGGCGACGGCCACGGCGAAGGTGGTACGGGAT
GTGACAAAGACGACAACGAAGACGACAACGAAGACGACGATGGTGGCGATGACGACAGCGACGGTGGTGGACATG
GAAGACGCCGTCGGCCCTCCCGCTAAGCGCCGCAAACGACAGCCGGCGACGAAGGCGACGACGACGGCGACGACG
ACGGCGACGACGGCGACTGCGCCCGCCGGCTGGCATGAGACATACGAGGCGGTGCGACGGATGCGGTCGCCCGGA
GGCGTGGCTCACGGCGCCCCGGTCGATACCATGGGCTGCGAGCGGCTGGCCGACAGACAGGCGTCGGCCAAGGAC
CAGCGCTTCCAAACGCTGGTGGCGCTGATGCTTTCAAGCCAGACCAAGGACACGGTCAACGCGGCGGCCATGCAC
CGGCTCAAGACGGAGCTGCGGCCGTCTAGGCACGGGGCTACGGCCGGGTTGACGGTGGATAATATACTGGCGGCG
GACCCGGCGGTGCTGAACGGGTTGATTTGGGCCGTGGGGTTTCACAACAACAAGACGAAACACCTACAACAGACG
GCGGCGGTGCTACGCGACAGCTGGGACGGAGACATCCCCGACACCATGGCCGGACTGACGGCACTGCCCGGCGTG
GGTCCCAAGATGGCCTACCTCTGCATGTCGGCGGCATGGGGCCGGACCGAGGGCATCGGTGTCGACGTACACGTG
CACCGCATCACCAACCTCTGGGGCTGGCAGCGGACGCGCAATCCGGAGGAGACGAGGCGGGCGCTCGAGGCCTGG
CTGCCGCGGGATCGGTGGCACGAGATCAACGGGCTGTTGGTCGGACTGGGCCAGGTCGTCTGTCGTCCTGTAGGA
AGGCGGTGCGGCGAGTGCGAGCTGGGACAGCGAGGCCTGTGCCGGGCAGCGAAGCGGTCATGA
Gene >Ophcf2|05427
ATGGCGCCCGGACGTATTACTCGATCGGCCTCGCGGGCCGCGGCGGCGACGGCCACGGCGAAGGTGGTACGGGAT
GTGACAAAGACGACAACGAAGACGACAACGAAGACGACGATGGTGGCGATGACGACAGCGACGGTGGTGGACATG
GAAGACGCCGTCGGCCCTCCCGCTAAGCGCCGCAAACGACAGCCGGCGACGAAGGCGACGACGACGGCGACGACG
ACGGCGACGACGGCGACTGCGCCCGCCGGCTGGCATGAGACATACGAGGCGGTGCGACGGATGCGGTCGCCCGGA
GGCGTGGCTCACGGCGCCCCGGTCGATACCATGGGCTGCGAGCGGCTGGCCGACAGACAGGCGTCGGCCAAGGAC
CAGCGCTTCCAAACGCTGGTGGCGCTGATGCTTTCAAGCCAGACCAAGGACACGGTCAACGCGGCGGCCATGCAC
CGGCTCAAGACGGAGCTGCGGCCGTCTAGGCACGGGGCTACGGCCGGGTTGACGGTGGATAATATACTGGCGGCG
GACCCGGCGGTGCTGAACGGGTTGATTTGGGCCGTGGGGTTTCACAACAACAAGACGAAGTGGGCTCTCCTCCAT
CACAAGAGTGCTGTCTAGTTATGCGGATGCTAACCAAGACAGACACCTACAACAGACGGCGGCGGTGCTACGCGA
CAGCTGGGACGGAGACATCCCCGACACCATGGCCGGACTGACGGCACTGCCCGGCGTGGGTCCCAAGATGGCCTA
CCTCTGCATGTCGGCGGCATGGGGCCGGACCGAGGGCATCGGTGTCGACGTACACGTGCACCGCATCACCAACCT
CTGGGGCTGGCAGCGGACGCGCAATCCGGAGGAGACGAGGCGGGCGCTCGAGGCCTGGCTGCCGCGGGATCGGTG
GCACGAGATCAACGGGCTGTTGGTCGGACTGGGCCAGGTCGTCTGTCGTCCTGTAGGAAGGCGGTGCGGCGAGTG
CGAGCTGGGACAGCGAGGCCTGTGCCGGGCAGCGAAGCGGTCATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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