Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05411
Gene name
Locationscaffold_06:57439..58726
Strand-
Gene length (bp)1287
Transcript length (bp)1098
Coding sequence length (bp)1098
Protein length (aa) 366

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11927 DUF3445 Protein of unknown function (DUF3445) 1.8E-70 84 321

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.5

Transmembrane Domains

Domain # Start End Length
1 7 24 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05411
MRFGDAVMMLLTVVVAALVAAVIYRRFGKTNDGPLRLNLLKLTAAKRRDSWKPDIVPLKGWDWTAEEPRKFRPYK
PVYHIGMGLRADTPSDLITIDRDYLDRVNIRRHLLREHGNILHGCAPGGEDGVSEVYGYLMRHYLPARFPTVFAL
SGNGREIRNLVTGRTHPTAMADAETSLRAIGETVEEDMFLVRETAGRHRSVAFICCFPAGFNPSTKLDKALEDIH
GPVPSYERIGPSIERFFGKLQVGKSVKRLNWVIQTHDRLLMLEPHDSPHPGVSETGEIDLETTFLRVELQTLTRL
PLTRDILFSFKTYLYPIRQIKEEGSGPDLAAAVEGLRLGNAPGMWKYKAGEQWARAVCGYLRGEN*
Coding >Ophcf2|05411
ATGCGGTTCGGAGACGCCGTGATGATGCTGCTGACGGTCGTCGTGGCCGCGTTGGTCGCTGCTGTCATCTATAGG
CGCTTTGGCAAGACGAACGATGGCCCGTTACGATTAAATCTGCTCAAGCTGACGGCCGCTAAGCGTCGAGATTCA
TGGAAGCCGGACATTGTTCCTCTCAAAGGCTGGGATTGGACGGCGGAGGAGCCGCGCAAGTTCCGGCCCTATAAA
CCCGTCTATCACATAGGCATGGGTCTCCGAGCCGATACGCCGTCGGACCTCATCACCATCGATAGAGACTATCTC
GACAGGGTCAATATCCGGCGCCATCTGCTTCGCGAGCACGGCAACATCCTCCATGGCTGCGCGCCCGGAGGAGAA
GACGGCGTCAGTGAGGTGTACGGCTACCTCATGCGTCACTACCTGCCGGCGCGCTTCCCTACTGTATTCGCCCTG
TCCGGCAACGGCCGAGAGATCCGCAACCTGGTGACGGGAAGGACGCATCCGACGGCCATGGCAGATGCCGAGACC
TCGCTGCGTGCCATCGGAGAGACTGTCGAGGAGGATATGTTCCTGGTGCGCGAGACGGCTGGCCGCCATCGATCT
GTCGCCTTTATCTGTTGCTTCCCCGCCGGCTTCAACCCGTCGACCAAGCTGGACAAGGCGCTCGAGGATATCCAC
GGGCCTGTGCCGTCGTATGAGCGCATCGGACCCAGTATAGAGCGCTTCTTCGGCAAACTTCAAGTCGGCAAGAGC
GTCAAGCGATTGAATTGGGTGATACAGACACACGATCGATTGCTCATGCTGGAGCCTCATGATTCACCGCACCCT
GGCGTGAGCGAGACGGGCGAGATAGATTTAGAAACGACGTTCTTGCGAGTCGAGCTCCAGACGCTGACGAGGCTG
CCGCTCACACGCGACATACTCTTCTCATTCAAGACCTATCTGTATCCGATCCGGCAGATCAAGGAAGAGGGCTCG
GGTCCGGATCTTGCGGCGGCCGTCGAGGGCTTGCGGCTGGGCAACGCGCCGGGCATGTGGAAGTACAAGGCAGGC
GAGCAGTGGGCGAGGGCTGTTTGTGGCTATCTGCGTGGTGAGAACTAG
Transcript >Ophcf2|05411
ATGCGGTTCGGAGACGCCGTGATGATGCTGCTGACGGTCGTCGTGGCCGCGTTGGTCGCTGCTGTCATCTATAGG
CGCTTTGGCAAGACGAACGATGGCCCGTTACGATTAAATCTGCTCAAGCTGACGGCCGCTAAGCGTCGAGATTCA
TGGAAGCCGGACATTGTTCCTCTCAAAGGCTGGGATTGGACGGCGGAGGAGCCGCGCAAGTTCCGGCCCTATAAA
CCCGTCTATCACATAGGCATGGGTCTCCGAGCCGATACGCCGTCGGACCTCATCACCATCGATAGAGACTATCTC
GACAGGGTCAATATCCGGCGCCATCTGCTTCGCGAGCACGGCAACATCCTCCATGGCTGCGCGCCCGGAGGAGAA
GACGGCGTCAGTGAGGTGTACGGCTACCTCATGCGTCACTACCTGCCGGCGCGCTTCCCTACTGTATTCGCCCTG
TCCGGCAACGGCCGAGAGATCCGCAACCTGGTGACGGGAAGGACGCATCCGACGGCCATGGCAGATGCCGAGACC
TCGCTGCGTGCCATCGGAGAGACTGTCGAGGAGGATATGTTCCTGGTGCGCGAGACGGCTGGCCGCCATCGATCT
GTCGCCTTTATCTGTTGCTTCCCCGCCGGCTTCAACCCGTCGACCAAGCTGGACAAGGCGCTCGAGGATATCCAC
GGGCCTGTGCCGTCGTATGAGCGCATCGGACCCAGTATAGAGCGCTTCTTCGGCAAACTTCAAGTCGGCAAGAGC
GTCAAGCGATTGAATTGGGTGATACAGACACACGATCGATTGCTCATGCTGGAGCCTCATGATTCACCGCACCCT
GGCGTGAGCGAGACGGGCGAGATAGATTTAGAAACGACGTTCTTGCGAGTCGAGCTCCAGACGCTGACGAGGCTG
CCGCTCACACGCGACATACTCTTCTCATTCAAGACCTATCTGTATCCGATCCGGCAGATCAAGGAAGAGGGCTCG
GGTCCGGATCTTGCGGCGGCCGTCGAGGGCTTGCGGCTGGGCAACGCGCCGGGCATGTGGAAGTACAAGGCAGGC
GAGCAGTGGGCGAGGGCTGTTTGTGGCTATCTGCGTGGTGAGAACTAG
Gene >Ophcf2|05411
ATGCGGTTCGGAGACGCCGTGATGATGCTGCTGACGGTCGTCGTGGCCGCGTTGGTCGCTGCTGTCATCTATAGG
CGCTTTGGCAAGACGAACGATGGCCCGTTACGATTAAATCTGCTCAAGCTGACGGCCGCTAAGCGTCGAGATTCA
TGGAAGCCGGACATTGTTCCTCTCAAAGGCTGGGATTGGACGGCGGAGGAGCCGCGCAAGTTCCGGCCCTATAAA
CCCGTCTATCACATAGGCATGGGTAGGAGAACTACCATCGTCATCGCGGCTCAGGCTCGGTGTGCTGACGACGGT
GACGAGCAGGTCTCCGAGCCGATACGCCGTCGGACCTCATCACCATCGATAGAGACTATCTCGACAGGGTCAATA
TCCGGCGCCATCTGCTTCGCGAGCACGGCAACATCCTCCATGGCTGCGCGCCCGGAGGAGAAGACGGCGTCAGTG
AGGTGTACGGCTACCTCATGCGTCACTACCTGCCGGCGCGCTTCCCTACTGTATTCGCCCTGTCCGGCAACGGCC
GAGAGATCCGCAACCTGGTGACGGGAAGGACGCATCCGACGGCCATGGCAGATGCCGAGACCTCGCTGCGTGCCA
TCGGAGAGACTGTCGAGGAGGATATGTTCCTGGTGCGCGAGACGGCTGGCCGCCATCGATCTGTCGCCTTTATCT
GTTGCTTCCCCGCCGGCTTCAACCCGTCGACCAAGCTGGACAAGGCGCTCGAGGATATCCACGGGCCTGTGCCGT
CGTATGAGCGCATCGGACCCAGTATAGAGCGCTTCTTCGGCAAACTTCAAGTCGGCAAGAGCGTCAAGCGATTGA
ATGTGAGTTCGCCTTGGGGAGGGGTTGATAGACTTGCTTGGTGTAAGAGCTGACCTGCGATCTTGGGTGACCAGT
GGGTGATACAGACACACGATCGATTGCTCATGCTGGAGCCTCATGATTCACCGCACCCTGGCGTGAGCGAGACGG
GCGAGATAGATTTAGAAACGGTGAGCGAGGATGGAAAGCTCGTCGTCGTGGGCGGTGTTTCTGACACGAGTTTAG
ACGTTCTTGCGAGTCGAGCTCCAGACGCTGACGAGGCTGCCGCTCACACGCGACATACTCTTCTCATTCAAGACC
TATCTGTATCCGATCCGGCAGATCAAGGAAGAGGGCTCGGGTCCGGATCTTGCGGCGGCCGTCGAGGGCTTGCGG
CTGGGCAACGCGCCGGGCATGTGGAAGTACAAGGCAGGCGAGCAGTGGGCGAGGGCTGTTTGTGGCTATCTGCGT
GGTGAGAACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail