Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05396
Gene name
Locationscaffold_05:3578375..3579264
Strand-
Gene length (bp)889
Transcript length (bp)816
Coding sequence length (bp)816
Protein length (aa) 272

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03194 LUC7 LUC7 N_terminus 1.3E-65 4 237

GO

GO Term Description Terminal node
GO:0005685 U1 snRNP Yes
GO:0003729 mRNA binding Yes
GO:0006376 mRNA splice site selection Yes
GO:0032991 protein-containing complex No
GO:0097159 organic cyclic compound binding No
GO:0009987 cellular process No
GO:0003676 nucleic acid binding No
GO:0065003 protein-containing complex assembly No
GO:1901363 heterocyclic compound binding No
GO:0003723 RNA binding No
GO:0071840 cellular component organization or biogenesis No
GO:0022618 ribonucleoprotein complex assembly No
GO:0030532 small nuclear ribonucleoprotein complex No
GO:0005488 binding No
GO:0120114 Sm-like protein family complex No
GO:0043933 protein-containing complex organization No
GO:1990904 ribonucleoprotein complex No
GO:0005575 cellular_component No
GO:0097525 spliceosomal snRNP complex No
GO:0140513 nuclear protein-containing complex No
GO:0003674 molecular_function No
GO:0071826 ribonucleoprotein complex subunit organization No
GO:0016043 cellular component organization No
GO:0022607 cellular component assembly No
GO:0008150 biological_process No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal 0.49 0.8012 0.0684 0.0144 0.0741 0.003 0.121 0.0847 0.0556 0.0013

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup3684
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|967
Ophiocordyceps australis map64 (Brazil) OphauB2|7287
Ophiocordyceps camponoti-floridani Ophcf2|05396 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|4348
Ophiocordyceps kimflemingae Ophio5|4004
Ophiocordyceps subramaniannii Hirsu2|7125

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05396
MAAEQRKLLEQLMGNSSSSRDAHLSLDDSKVCRSHIVGTCPHDLFTNTKQDFGPCGKVHSEGLKTEYEALPEREK
QRHGLEYDYVRDLHKYIDDCNRRIEAAQKRLEKTPEEIRQTNDLLESIADLEENIKSGLQEIQIFAEQNLVGVAI
EEWFNLKVMAQTKADKERDLKALSDTSGPSGHQKLQVCDVCGAYLSRLDNDRRLADHFYGKMHLGYAQMRKAYDA
FPKEMKVRARQQPSMMDSDGPGGPRGPKGSGGYRSYRGGGRSHRNG*
Coding >Ophcf2|05396
ATGGCGGCGGAGCAGAGAAAGCTGCTGGAGCAGCTCATGGGCAACTCATCGTCCTCGCGCGACGCCCATCTCTCA
CTCGACGACTCCAAGGTCTGCCGCTCGCACATCGTAGGCACGTGCCCGCACGATCTATTCACCAACACCAAGCAA
GACTTTGGGCCCTGCGGCAAGGTGCACTCGGAAGGACTCAAGACCGAGTACGAGGCTCTTCCGGAGCGCGAGAAG
CAAAGGCACGGGCTCGAGTACGACTACGTCCGCGACCTGCACAAGTACATTGACGACTGCAACCGCCGCATCGAA
GCCGCGCAGAAACGTCTCGAAAAGACGCCCGAGGAAATCAGACAAACGAACGATCTGCTGGAGAGCATTGCCGAC
CTGGAGGAAAACATAAAGTCTGGACTGCAGGAGATACAGATCTTTGCCGAGCAGAACCTCGTTGGGGTCGCCATC
GAAGAGTGGTTCAACCTCAAGGTCATGGCGCAGACAAAGGCAGACAAGGAACGGGACCTAAAGGCTCTTTCCGAC
ACGTCTGGTCCCTCGGGCCATCAAAAGCTTCAAGTGTGCGACGTCTGCGGCGCCTACCTCAGCCGCCTCGACAAC
GATCGACGACTAGCAGACCACTTCTACGGCAAGATGCATCTGGGATACGCGCAAATGCGTAAGGCCTATGACGCG
TTCCCCAAGGAGATGAAGGTTCGAGCGCGCCAACAGCCCTCCATGATGGACAGCGACGGTCCCGGGGGACCTCGA
GGACCCAAGGGATCGGGCGGTTACAGGAGCTACAGAGGCGGTGGCAGAAGCCACCGGAACGGCTGA
Transcript >Ophcf2|05396
ATGGCGGCGGAGCAGAGAAAGCTGCTGGAGCAGCTCATGGGCAACTCATCGTCCTCGCGCGACGCCCATCTCTCA
CTCGACGACTCCAAGGTCTGCCGCTCGCACATCGTAGGCACGTGCCCGCACGATCTATTCACCAACACCAAGCAA
GACTTTGGGCCCTGCGGCAAGGTGCACTCGGAAGGACTCAAGACCGAGTACGAGGCTCTTCCGGAGCGCGAGAAG
CAAAGGCACGGGCTCGAGTACGACTACGTCCGCGACCTGCACAAGTACATTGACGACTGCAACCGCCGCATCGAA
GCCGCGCAGAAACGTCTCGAAAAGACGCCCGAGGAAATCAGACAAACGAACGATCTGCTGGAGAGCATTGCCGAC
CTGGAGGAAAACATAAAGTCTGGACTGCAGGAGATACAGATCTTTGCCGAGCAGAACCTCGTTGGGGTCGCCATC
GAAGAGTGGTTCAACCTCAAGGTCATGGCGCAGACAAAGGCAGACAAGGAACGGGACCTAAAGGCTCTTTCCGAC
ACGTCTGGTCCCTCGGGCCATCAAAAGCTTCAAGTGTGCGACGTCTGCGGCGCCTACCTCAGCCGCCTCGACAAC
GATCGACGACTAGCAGACCACTTCTACGGCAAGATGCATCTGGGATACGCGCAAATGCGTAAGGCCTATGACGCG
TTCCCCAAGGAGATGAAGGTTCGAGCGCGCCAACAGCCCTCCATGATGGACAGCGACGGTCCCGGGGGACCTCGA
GGACCCAAGGGATCGGGCGGTTACAGGAGCTACAGAGGCGGTGGCAGAAGCCACCGGAACGGCTGA
Gene >Ophcf2|05396
ATGGCGGCGGAGCAGAGAAAGCTGCTGGAGCAGCTCATGGGCAACTCATCGTCCTCGCGCGACGCCCATCTCTCA
CTCGACGACTCCAAGGTCTGCCGCTCGCACATCGTAGGCACGTGCCCGCACGATCTATTCACCAACACCAAGCAA
GACTTTGGGCCCTGCGGCAAGGTGCACTCGGAAGGACTCAAGACCGAGTACGAGGCTCTTCCGGAGCGCGAGAAG
CAAAGGCACGGGCTCGAGTACGACTACGTCCGCGACCTGCACAAGTACATTGACGACTGCAACCGCCGCATCGAA
GCCGCGCAGAAACGTCTCGAAAAGACGCCCGAGGAAATCAGACAAACGAACGATCTGGTAAGCATCTGCTTTTCC
TTGCACAACGCCCATCTCATTTGCGAGTCTGATAATGGATATCTCGAAAAACCAGCTGGAGAGCATTGCCGACCT
GGAGGAAAACATAAAGTCTGGACTGCAGGAGATACAGATCTTTGCCGAGCAGAACCTCGTTGGGGTCGCCATCGA
AGAGTGGTTCAACCTCAAGGTCATGGCGCAGACAAAGGCAGACAAGGAACGGGACCTAAAGGCTCTTTCCGACAC
GTCTGGTCCCTCGGGCCATCAAAAGCTTCAAGTGTGCGACGTCTGCGGCGCCTACCTCAGCCGCCTCGACAACGA
TCGACGACTAGCAGACCACTTCTACGGCAAGATGCATCTGGGATACGCGCAAATGCGTAAGGCCTATGACGCGTT
CCCCAAGGAGATGAAGGTTCGAGCGCGCCAACAGCCCTCCATGATGGACAGCGACGGTCCCGGGGGACCTCGAGG
ACCCAAGGGATCGGGCGGTTACAGGAGCTACAGAGGCGGTGGCAGAAGCCACCGGAACGGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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