Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05392
Gene name
Locationscaffold_05:3568789..3570983
Strand-
Gene length (bp)2194
Transcript length (bp)912
Coding sequence length (bp)912
Protein length (aa) 304

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06699 PIG-F GPI biosynthesis protein family Pig-F 1.7E-50 67 244
PF01679 Pmp3 Proteolipid membrane potential modulator 1.4E-20 253 301

GO

GO Term Description Terminal node
GO:0006506 GPI anchor biosynthetic process Yes
GO:0005789 endoplasmic reticulum membrane Yes
GO:0016021 integral component of membrane Yes
GO:0044255 cellular lipid metabolic process No
GO:0031090 organelle membrane No
GO:0046486 glycerolipid metabolic process No
GO:0009247 glycolipid biosynthetic process No
GO:0046488 phosphatidylinositol metabolic process No
GO:0006505 GPI anchor metabolic process No
GO:0043170 macromolecule metabolic process No
GO:1901576 organic substance biosynthetic process No
GO:0009058 biosynthetic process No
GO:0031224 intrinsic component of membrane No
GO:0008654 phospholipid biosynthetic process No
GO:0008152 metabolic process No
GO:1901564 organonitrogen compound metabolic process No
GO:1903509 liposaccharide metabolic process No
GO:0036211 protein modification process No
GO:0006497 protein lipidation No
GO:0009987 cellular process No
GO:0006643 membrane lipid metabolic process No
GO:0110165 cellular anatomical entity No
GO:0044237 cellular metabolic process No
GO:0046474 glycerophospholipid biosynthetic process No
GO:0043412 macromolecule modification No
GO:0019637 organophosphate metabolic process No
GO:0006793 phosphorus metabolic process No
GO:0016020 membrane No
GO:0006661 phosphatidylinositol biosynthetic process No
GO:0046467 membrane lipid biosynthetic process No
GO:1901135 carbohydrate derivative metabolic process No
GO:0008150 biological_process No
GO:0044249 cellular biosynthetic process No
GO:0006650 glycerophospholipid metabolic process No
GO:0006664 glycolipid metabolic process No
GO:0006796 phosphate-containing compound metabolic process No
GO:0071704 organic substance metabolic process No
GO:0006644 phospholipid metabolic process No
GO:0008610 lipid biosynthetic process No
GO:0045017 glycerolipid biosynthetic process No
GO:0090407 organophosphate biosynthetic process No
GO:1901137 carbohydrate derivative biosynthetic process No
GO:0006629 lipid metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0005575 cellular_component No
GO:0044238 primary metabolic process No
GO:0019538 protein metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 40 0.45

Transmembrane Domains

Domain # Start End Length
1 62 81 19
2 86 108 22
3 140 162 22
4 177 199 22
5 212 231 19
6 279 301 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05392
MVPQQGKARLEYVQSLSRPAATMPAADMRQTPPPLSGSKAGHRQKTSIEAVPMLDTPLARTVSLARPVTLAGLLA
GRFGALVADPVAALGSGLAVVVAVQVFYAVVCLPAAGSKATKRARPGERRKGSSAVGGPGRVSTALLSLALTAMA
TPIAFAMMVLFGAPLLDDVAKTMLCAAHLSIMGLFPIFYARGVNGNALVSLAGASAPLDETFGGLAGGVVGGWLG
AVPIPLDWDRSWQRWPIQLPTMPLTCSDICKFICAIFLPPLGVFLEVGCTIDLLINIGLTILGYLPGIIHAIYII
VTR*
Coding >Ophcf2|05392
ATGGTGCCGCAACAGGGCAAGGCTCGCCTCGAATACGTGCAGTCCCTCTCCCGGCCCGCGGCGACCATGCCGGCG
GCAGACATGCGACAAACGCCGCCTCCCTTGAGCGGTAGCAAGGCAGGACACAGGCAGAAAACGAGCATCGAAGCC
GTGCCCATGCTCGACACGCCCCTCGCGCGGACCGTCTCGCTAGCCCGGCCGGTGACTCTGGCTGGATTACTGGCT
GGGCGCTTCGGCGCGCTGGTGGCGGATCCCGTGGCCGCGCTGGGGTCTGGACTGGCAGTCGTCGTGGCTGTACAG
GTTTTTTACGCTGTCGTCTGCTTGCCGGCGGCGGGATCCAAGGCGACTAAGAGGGCTCGTCCTGGGGAAAGACGG
AAGGGCTCCTCGGCAGTTGGGGGTCCGGGTCGCGTTTCGACGGCTTTACTCTCGTTGGCGCTGACAGCCATGGCG
ACACCCATCGCTTTTGCCATGATGGTTCTCTTCGGCGCCCCGCTTCTCGACGACGTGGCCAAGACGATGCTATGC
GCAGCGCACCTGTCGATCATGGGTCTGTTCCCCATCTTTTACGCCCGCGGGGTGAACGGCAACGCGCTGGTTTCC
CTGGCGGGAGCGTCTGCGCCCCTGGACGAAACGTTTGGCGGACTTGCCGGTGGCGTCGTCGGTGGTTGGCTGGGA
GCGGTGCCCATTCCGCTTGATTGGGATCGGTCGTGGCAGCGGTGGCCGATTCAACTGCCCACCATGCCTCTCACT
TGCAGCGATATCTGCAAATTTATTTGCGCCATCTTCCTGCCGCCTCTGGGAGTCTTCCTCGAGGTCGGCTGCACG
ATTGACCTGCTCATCAACATCGGTCTCACCATTCTCGGTTACCTTCCCGGCATCATCCATGCCATCTACATCATA
GTCACAAGATAG
Transcript >Ophcf2|05392
ATGGTGCCGCAACAGGGCAAGGCTCGCCTCGAATACGTGCAGTCCCTCTCCCGGCCCGCGGCGACCATGCCGGCG
GCAGACATGCGACAAACGCCGCCTCCCTTGAGCGGTAGCAAGGCAGGACACAGGCAGAAAACGAGCATCGAAGCC
GTGCCCATGCTCGACACGCCCCTCGCGCGGACCGTCTCGCTAGCCCGGCCGGTGACTCTGGCTGGATTACTGGCT
GGGCGCTTCGGCGCGCTGGTGGCGGATCCCGTGGCCGCGCTGGGGTCTGGACTGGCAGTCGTCGTGGCTGTACAG
GTTTTTTACGCTGTCGTCTGCTTGCCGGCGGCGGGATCCAAGGCGACTAAGAGGGCTCGTCCTGGGGAAAGACGG
AAGGGCTCCTCGGCAGTTGGGGGTCCGGGTCGCGTTTCGACGGCTTTACTCTCGTTGGCGCTGACAGCCATGGCG
ACACCCATCGCTTTTGCCATGATGGTTCTCTTCGGCGCCCCGCTTCTCGACGACGTGGCCAAGACGATGCTATGC
GCAGCGCACCTGTCGATCATGGGTCTGTTCCCCATCTTTTACGCCCGCGGGGTGAACGGCAACGCGCTGGTTTCC
CTGGCGGGAGCGTCTGCGCCCCTGGACGAAACGTTTGGCGGACTTGCCGGTGGCGTCGTCGGTGGTTGGCTGGGA
GCGGTGCCCATTCCGCTTGATTGGGATCGGTCGTGGCAGCGGTGGCCGATTCAACTGCCCACCATGCCTCTCACT
TGCAGCGATATCTGCAAATTTATTTGCGCCATCTTCCTGCCGCCTCTGGGAGTCTTCCTCGAGGTCGGCTGCACG
ATTGACCTGCTCATCAACATCGGTCTCACCATTCTCGGTTACCTTCCCGGCATCATCCATGCCATCTACATCATA
GTCACAAGATAG
Gene >Ophcf2|05392
ATGGTGCCGCAACAGGTGAGAGGGCAGCGTTGGGCTGGGCGGACGGACTCTCGGTTCTTTGCAACATCCCCTGTA
GTAGGGAGTTGGCTGTCGGACCGAAATTCGCTTGGACGATGCTCATCACGTGATGCAGTTTGTCGGCCACCATAG
TCACGTGGACCGGCTACAAGCTGTTCTTTGCCTCGATGACGCCCGCGGCACAAGGGCAAGGCTCGCCTCGAATAC
GTGCAGTCCCTCTCCCGGCCCGCGGCGACCATGCCGGCGGCAGACATGCGACAAACGCCGCCTCCCTTGAGCGGT
AGCAAGGCAGGACACAGGCAGAAAACGAGCATCGAAGCCGTGCCCATGCTCGACACGCCCCTCGCGCGGACCGTC
TCGCTAGCCCGGCCGGTGACTCTGGCTGGATTACTGGCTGGGCGCTTCGGCGCGCTGGTGGCGGATCCCGTGGCC
GCGCTGGGGTCTGGACTGGCAGTCGTCGTGGCTGTACAGGTTTTTTACGCTGTCGTCTGCTTGCCGGCGGCGGGA
TCCAAGGCGACTAAGAGGGCTCGTCCTGGGGAAAGACGGAAGGGCTCCTCGGCAGTTGGGGGTCCGGGTCGCGTT
TCGGTAAGGGTCCGGGCGAGAACGATGTGACGTGGAGAGAAAACATCTAACGACGGGTGATGACGGCAGACGGCT
TTACTCTCGTTGGCGCTGACAGCCATGGCGACACCCATCGCTTTTGCCATGATGGTTCTCTTCGGCGCCCCGCTT
CTCGACGACGTGGCCAAGACGATGCTATGCGCAGCGCACCTGTCGATCATGGGTCTGTTCCCCATCTTTTACGCC
CGCGGGGTGAACGGCAACGCGCTGGTTTCCCTGGCGGGAGCGTCTGCGCCCCTGGACGAAACGTTTGGCGGACTT
GCCGGTGGCGTCGTCGGTGGTTGGCTGGGAGCGGTGCCCATTCCGCTTGATTGGGATCGGTCGTGGCAGCGGTGG
CCGGTAACAATTGTCGTCGGTGTGTACGTGGGTTCGCTACTGGGCAGTTGTCTGGCTGGGACCGGCTGGCTTTAC
GGCCGGAGCTTCGGTGGGGAGCAGACTGAGGAGAAGGAGGATTCGCAGGGAAAGGGAAAAGGGGAGATGAGGGCG
GGGAGCTGATGAGTCGTTATTGTTATCCGGGTCGTGGGTTGTGGCCGGCGGTCTGGGGACTCTCCTCGGCAAAGA
TCAGGGAAAGCCCCCTAAAAAACAAGGTGGAATAGGTGGGGCGTGACGAAGACGGATTGAATCATTCATCAGATG
ACTCGGACGTTGTTTACCGAGACATTGGTGATGACGGCGACTCGTCAACCAGTTCGGCGGTGGCGGCTCGTCAGC
GCCTTGGAAGAGATGGCCCGGGTTTGAATCCAGACGGCGGCATGACGTAACGGTGTCTAACTGGGGCAGTGCGCA
AGGCGTTGACGTCATGGCCCGCACCCTGTTGCCTGTTGCCCGGAGCCTGTAGGTATGTATGTACGGAATCCCTAG
ACAGACAGATGGTATTGGCAGTTCTGGAGCAATTCCGGGGGGCGCGGCGGCCTCGGGGCATCGTCCGAGCGAGGC
CACGCCGTCGTCACTGGGGGACCTGACCGAACGGTCCACAGATCCGTGGATGACACGCTGGAGTCGCTGGTGAAG
CTCGAGCGTAGCGGATCCGGCGGCCGCTGACGGAGGCTGACGGTTAGCGGGTCGCCAGCGTCTCACTTCAGGGCC
CTGGACCGGGTTAATTAGGTTAGTAATCCCGGGGTTTGCCTGTAGGCTGTCAGCTTTCCAGGTTGGACGGTTGCT
CTGCTGCTGCTGCAACTACTACTACTACTACTACCCCCTCTTCCTCCTCGTCATTCTCTGTTCTCTTACCTCTTC
TCCTCTCCTCGTCCAACGCAACTGTTCGCCTTCAACGCTTGTCAACTCCTCTCGCTTGATCGCGTCTAGATTCAA
CTGCCCACCATGCCTCTCACTTGCAGGTTAGACCTCCACCCGTCTTCTCTGTTGCCACCTGCTGACGCGTCTTTT
TTCCCCTCATAGCGATATCTGCAAATTTATTTGCGCCATCTTCCTGCCGCCTCTGGGAGTCTTCCTCGAGGTCGG
CTGCACGATTGACCTGCTCATCAACATCGGTCTCACCATTCTCGGTTACCTTCCCGGCATCATCCATGCCATCTA
CATCATAGTCACAAGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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