Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05337
Gene name
Locationscaffold_05:3344726..3346072
Strand+
Gene length (bp)1346
Transcript length (bp)1188
Coding sequence length (bp)1188
Protein length (aa) 396

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14378 PAP2_3 PAP2 superfamily 4.8E-32 144 351

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

Domain # Start End Length
1 5 22 17
2 109 131 22
3 177 196 19
4 216 233 17
5 286 308 22
6 315 337 22
7 341 363 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05337
MVLGAVLEPLVVVTLLFGGAWVNRSGKGAVDVVVDDYPDDDDLEGKRRRSGSSSWSGSSDATLATLSSTRKRRVR
FLTWEADLSTPNTAVFANRGLSRLLRKFPFLVEAWYWALIYWVYQIARAVTALTLVEGTVHVARKHALQVIHLEQ
RLGILMEPQIQRFFLSHPLLLHWTNRVYSFIHIPGTIFFLVSLFYLTTTTRRASPALYEARRRSMAMCNLVAFVV
FTVWPCMPPRLLSEAGYRGEDAEEAKGFGFVDTVHSKAGESSVWTTNRFCNQYAAMPSLHFGYSLLIGLTIATLP
VPSLRWTSWKRISIVAVGIAYPTLIFTAIVATANHFILDAVAGALVCAIAWHTNGLLLNLLVLEDYFLRLLRIHK
PGNDEVLVGPDTRRLLKDEP*
Coding >Ophcf2|05337
ATGGTTCTGGGCGCGGTGTTGGAACCGCTTGTTGTTGTTACCCTTCTTTTTGGTGGCGCGTGGGTGAACCGGTCC
GGGAAGGGTGCTGTCGATGTTGTTGTCGACGATTACCCTGATGACGATGACCTCGAGGGCAAGAGGCGACGGTCC
GGATCCAGTTCCTGGAGTGGAAGCTCGGATGCGACGTTGGCGACCCTCTCATCGACTCGGAAGCGGAGGGTTCGG
TTCCTGACGTGGGAGGCGGACCTTTCGACGCCTAATACTGCCGTCTTTGCGAATAGGGGGTTGAGTCGATTGCTG
AGGAAGTTTCCCTTTCTCGTGGAGGCTTGGTATTGGGCTCTTATCTACTGGGTGTATCAAATTGCACGCGCCGTC
ACGGCCCTTACCCTCGTTGAAGGAACGGTTCACGTGGCGAGGAAACACGCTCTGCAGGTAATCCACCTCGAACAA
CGACTCGGTATCCTCATGGAACCGCAAATCCAACGCTTCTTCCTCTCGCATCCGCTCCTCCTCCACTGGACCAAC
AGAGTCTACTCCTTCATCCACATCCCCGGCACCATCTTCTTCCTCGTCAGCCTCTTCTACCTCACGACGACGACC
CGACGCGCCAGTCCAGCCCTCTACGAAGCGCGACGCAGATCAATGGCAATGTGCAATCTCGTCGCCTTTGTCGTC
TTCACCGTTTGGCCGTGTATGCCGCCCAGACTGCTCAGCGAGGCTGGGTATCGCGGTGAGGACGCCGAAGAGGCA
AAGGGGTTTGGCTTCGTCGACACGGTTCATTCCAAGGCAGGGGAGAGCAGCGTCTGGACGACGAATCGCTTCTGC
AACCAATACGCCGCAATGCCGTCCTTGCACTTTGGCTACTCTCTCCTCATCGGCCTCACCATCGCCACGCTACCG
GTACCGAGCCTTCGCTGGACGTCATGGAAGCGCATATCCATCGTGGCCGTCGGAATCGCGTACCCGACTCTGATA
TTCACTGCCATCGTCGCGACGGCGAATCACTTCATCCTCGATGCCGTTGCCGGTGCGCTCGTCTGCGCAATCGCA
TGGCACACCAACGGCCTGCTATTGAATCTCCTCGTCCTGGAAGATTATTTCCTCCGTCTGCTTCGTATTCATAAG
CCGGGGAATGACGAGGTGCTGGTAGGGCCGGATACGAGGAGGCTGTTAAAAGATGAGCCGTGA
Transcript >Ophcf2|05337
ATGGTTCTGGGCGCGGTGTTGGAACCGCTTGTTGTTGTTACCCTTCTTTTTGGTGGCGCGTGGGTGAACCGGTCC
GGGAAGGGTGCTGTCGATGTTGTTGTCGACGATTACCCTGATGACGATGACCTCGAGGGCAAGAGGCGACGGTCC
GGATCCAGTTCCTGGAGTGGAAGCTCGGATGCGACGTTGGCGACCCTCTCATCGACTCGGAAGCGGAGGGTTCGG
TTCCTGACGTGGGAGGCGGACCTTTCGACGCCTAATACTGCCGTCTTTGCGAATAGGGGGTTGAGTCGATTGCTG
AGGAAGTTTCCCTTTCTCGTGGAGGCTTGGTATTGGGCTCTTATCTACTGGGTGTATCAAATTGCACGCGCCGTC
ACGGCCCTTACCCTCGTTGAAGGAACGGTTCACGTGGCGAGGAAACACGCTCTGCAGGTAATCCACCTCGAACAA
CGACTCGGTATCCTCATGGAACCGCAAATCCAACGCTTCTTCCTCTCGCATCCGCTCCTCCTCCACTGGACCAAC
AGAGTCTACTCCTTCATCCACATCCCCGGCACCATCTTCTTCCTCGTCAGCCTCTTCTACCTCACGACGACGACC
CGACGCGCCAGTCCAGCCCTCTACGAAGCGCGACGCAGATCAATGGCAATGTGCAATCTCGTCGCCTTTGTCGTC
TTCACCGTTTGGCCGTGTATGCCGCCCAGACTGCTCAGCGAGGCTGGGTATCGCGGTGAGGACGCCGAAGAGGCA
AAGGGGTTTGGCTTCGTCGACACGGTTCATTCCAAGGCAGGGGAGAGCAGCGTCTGGACGACGAATCGCTTCTGC
AACCAATACGCCGCAATGCCGTCCTTGCACTTTGGCTACTCTCTCCTCATCGGCCTCACCATCGCCACGCTACCG
GTACCGAGCCTTCGCTGGACGTCATGGAAGCGCATATCCATCGTGGCCGTCGGAATCGCGTACCCGACTCTGATA
TTCACTGCCATCGTCGCGACGGCGAATCACTTCATCCTCGATGCCGTTGCCGGTGCGCTCGTCTGCGCAATCGCA
TGGCACACCAACGGCCTGCTATTGAATCTCCTCGTCCTGGAAGATTATTTCCTCCGTCTGCTTCGTATTCATAAG
CCGGGGAATGACGAGGTGCTGGTAGGGCCGGATACGAGGAGGCTGTTAAAAGATGAGCCGTGA
Gene >Ophcf2|05337
ATGGTTCTGGGCGCGGTGTTGGAACCGCTTGTTGTTGTTACCCTTCTTTTTGGTGGCGCGTGGGTGAACCGGTCC
GGGAAGGGTGCTGTCGATGTTGTTGTCGACGATTACCCTGATGACGATGACCTCGAGGGCAAGAGGCGACGGTCC
GGATCCAGTTCCTGGAGTGGAAGCTCGGATGCGACGTTGGCGACCCTCTCATCGACTCGGAAGCGGAGGGTTCGG
TTCCTGACGTGGGAGGCGGACCTTTCGACGCCTAATACTGCCGTCTTTGCGAATAGGGGGTTGAGTCGATTGCTG
AGGAAGTTTCCCTTTCTCGTGGAGGCTTGGTATTGGGCTCTTATCTACTGGGTGAGTTTCTCTCTCGGTGGAATT
TACTTGTGGTCTTGCTGATGATGGTAGGTGTATCAAATTGCACGCGCCGTCACGGCCCTTACCCTCGTTGAAGGA
ACGGTTCACGTGGCGAGGAAACACGCTCTGCAGGTAATCCACCTCGAACAACGACTCGGTATCCTCATGGAACCG
CAAATCCAACGCTTCTTCCTCTCGCATCCGCTCCTCCTCCACTGGACCAACAGAGTCTACTCCTTCATCCACATC
CCCGGCACCATCTTCTTCCTCGTCAGCCTCTTCTACCTCACGACGACGACCCGACGCGCCAGTCCAGCCCTCTAC
GAAGCGCGACGCAGATCAATGGCAATGTGCAATCTCGTCGCCTTTGTCGTCTTCACCGTTTGGCCGTGTATGCCG
CCCAGACTGCTCAGCGAGGCTGGGTATCGCGGTGAGGACGCCGAAGAGGCAAAGGGGTTTGGCTTCGTCGACACG
GTTCATTCCAAGGCAGGGGAGAGCAGCGTCTGGACGACGAATCGCTTCTGCAACCAATACGGTCAGTATCCACCA
TAACAAAAAGAGGAGGGGGGAAAAAAGAAAACAAAACGACGGTCCTGTCGGCAACACGTGCCGATGCATCATCTC
GCTAACGTGCCGTCGCAGCCGCAATGCCGTCCTTGCACTTTGGCTACTCTCTCCTCATCGGCCTCACCATCGCCA
CGCTACCGGTACCGAGCCTTCGCTGGACGTCATGGAAGCGCATATCCATCGTGGCCGTCGGAATCGCGTACCCGA
CTCTGATATTCACTGCCATCGTCGCGACGGCGAATCACTTCATCCTCGATGCCGTTGCCGGTGCGCTCGTCTGCG
CAATCGCATGGCACACCAACGGCCTGCTATTGAATCTCCTCGTCCTGGAAGATTATTTCCTCCGTCTGCTTCGTA
TTCATAAGCCGGGGAATGACGAGGTGCTGGTAGGGCCGGATACGAGGAGGCTGTTAAAAGATGAGCCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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