Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophcf2\|05318
Gene name
Location	scaffold_05:3276397..3278249
Strand	-
Gene length (bp)	1852
Transcript length (bp)	711
Coding sequence length (bp)	711
Protein length (aa)	237

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	20	42	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
Fungus	Fungus in pure culture	157.57	90.49	224.65
Alive	In ants, during behavior modification	8.87	1.91	15.82
Dead	In ants, recently dead	7.48	1.23	13.72

Differential expression

Label1	Label2	Q-value	Significant difference
Alive	Fungus	0.000238	yes
Alive	Dead	0.624945	no
Dead	Fungus	0.000238	yes

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2\|05318 MTSRLTARGLELGASLSLGWLLVIILGGGVIVFTGLGLGLAWRLKRIRRRRQRQRDSDMRMGVYCGGETSRTRLT KMSGGGLGSSIPACFRFSSSALFGTRLSSSVSVRLSFRTPQRDQLHEKRLSPAQLPQVSPVRSLAQGQPLSPQRG KIHEQQLSPQRDKVHEQQLPPAQLPQLSPVRSPAQEQQLSPPQLPPLSPQRDQLHDKRLTPAQLPKLNPVPSPAH EQQLKPPSSHH*
Coding	>Ophcf2\|05318 ATGACATCCCGCCTCACCGCCCGAGGTCTCGAGCTCGGCGCCAGCCTCAGCCTCGGCTGGCTCCTGGTAATCATC CTCGGCGGAGGCGTAATCGTCTTCACGGGTCTAGGTCTAGGCCTAGCCTGGCGATTGAAGCGGATCCGACGACGA CGACAGCGGCAGCGAGATTCGGATATGCGGATGGGTGTTTACTGCGGCGGCGAGACTTCGCGGACGAGACTTACA AAGATGTCTGGCGGGGGGTTGGGCAGCAGCATCCCGGCCTGCTTCAGATTCAGCAGTTCGGCCCTGTTCGGAACT CGGCTGTCGAGCAGCGTCTCAGTGCGCCTCAGCTTCCGCACCCCTCAGAGAGACCAGCTACATGAGAAGCGGCTC AGTCCGGCTCAGCTCCCGCAAGTCAGTCCGGTTCGGAGTTTAGCTCAGGGGCAGCCCCTCAGCCCTCAACGAGGC AAAATACACGAGCAGCAACTCAGCCCTCAACGAGACAAAGTGCACGAGCAGCAACTCCCTCCGGCTCAGCTCCCG CAACTCAGTCCCGTTCGGAGTCCAGCTCAGGAGCAACAGCTGAGCCCTCCCCAGCTCCCACCACTAAGCCCCCAG CGAGACCAACTACACGACAAGCGGCTCACTCCAGCTCAGCTCCCGAAACTCAATCCCGTTCCGAGTCCAGCTCAC GAGCAGCAACTGAAACCCCCCAGCTCCCACCACTAA
Transcript	>Ophcf2\|05318 ATGACATCCCGCCTCACCGCCCGAGGTCTCGAGCTCGGCGCCAGCCTCAGCCTCGGCTGGCTCCTGGTAATCATC CTCGGCGGAGGCGTAATCGTCTTCACGGGTCTAGGTCTAGGCCTAGCCTGGCGATTGAAGCGGATCCGACGACGA CGACAGCGGCAGCGAGATTCGGATATGCGGATGGGTGTTTACTGCGGCGGCGAGACTTCGCGGACGAGACTTACA AAGATGTCTGGCGGGGGGTTGGGCAGCAGCATCCCGGCCTGCTTCAGATTCAGCAGTTCGGCCCTGTTCGGAACT CGGCTGTCGAGCAGCGTCTCAGTGCGCCTCAGCTTCCGCACCCCTCAGAGAGACCAGCTACATGAGAAGCGGCTC AGTCCGGCTCAGCTCCCGCAAGTCAGTCCGGTTCGGAGTTTAGCTCAGGGGCAGCCCCTCAGCCCTCAACGAGGC AAAATACACGAGCAGCAACTCAGCCCTCAACGAGACAAAGTGCACGAGCAGCAACTCCCTCCGGCTCAGCTCCCG CAACTCAGTCCCGTTCGGAGTCCAGCTCAGGAGCAACAGCTGAGCCCTCCCCAGCTCCCACCACTAAGCCCCCAG CGAGACCAACTACACGACAAGCGGCTCACTCCAGCTCAGCTCCCGAAACTCAATCCCGTTCCGAGTCCAGCTCAC GAGCAGCAACTGAAACCCCCCAGCTCCCACCACTAA
Gene	>Ophcf2\|05318 ATGACATCCCGCCTCACCGCCCGAGGTCTCGAGCTCGGCGCCAGCCTCAGCCTCGGCTGGCTCCTGGTAATCATC CTCGGCGGAGGCGTAATCGTCTTCACGGGTCTAGGTCTAGGCCTAGCCTGGCGATTGAAGCGGATCCGACGACGA CGACAGCGGCAGCGAGATTCGGATATGCGGATGGGTGTTTACTGCGGCGGCGAGACTTCGCGGACGAGACTTACA AAGATGTCTGGCGGGTATCTGCCCGCTTTGTCGAGTGGGGGGTCTTTGGGGTTTGCGTCTGATGAAGGGGGGGTT AAAGAGGTGGTTGAAGGGAAGATTGGGATTCCGGCTGCGGCGAAGATGGTTCGTAAGTCTGTTACTGATTCGGAT TTACGGCTTATTCTTCGGTCTACGGATGAGAGGTTACGGACTCGCAGCCAAAGTCCCAGCAAGACTCACCCGAAC AGCGCGCCAACTTCACCAACAAAGACAGCCTCCTCACCCCGCAAGCAACCCGCACCAACCAAGGCGACAGACGCG CTTCTCTCGACGGCGACGAACCAGCTTGATGATGCGGAGAGGGTGGAGTGGCAGAGTAGGTTGAGTCCCTTGCGG GGGGGGTCGCCGCGGAGGAGATCGAGGGGGAGTTCGCTTTCGAGTACGCTTTCTACGCTTTATAGTGTTGAGGAG GAGGGGAAGGGAGGGGGAGGGGAGGGGGTTGAGGAGAGGGATCACGTTTATTTCCATGCGGTTGGGAGTCCCGTT CGGGGGGGGAGGGGCGGTTGGGTCAAGTTGAGTCAACAGCAAAAGCAGGGCGGTCCGGTCCAACTCCCTGCTCAA CAAAGACTCAGCCAGCTACAGCCTCAACAGAGGCTCAGCCCGGCTCAGCAACAACAGCCTTCACAAGGACTCAAT CCCAACCAACAACCTCCCAGAGCCCCCCCTTTCCCACCCCCCCCGAAACAACCCCGTCCATCAAGCCAGTCCGGA AGCCCAACTCAGCCCCACGCAGCAGGCCGTCGTGAAGCAACGGCAAAGCCCGACGCGGAAGTCTCTCGGCAGTCC TGCGAGCTTGCAGCAGCGGGGTGCGCCCGTGCAGGGAGAGGGGGTTCAGCAGGGGAAGCTTGGTTCGCTTCCGCT TTTTTCGCGGTTTGGAGCCGATGGGAATCGCGGGCTTGAGATGCAGCTTGATCCGAGTTTGTTTCCGCGGGGGAG TCCTCGACGGGAACAGGGGGTTGGGCAGCAGCATCCCGGCCTGCTTCAGATTCAGCAGTTCGGCCCTGTTCGGAA CTCGGCTGTCGAGCAGCGTCTCAGTGCGCCTCAGCTTCCGCACGTCAGTCCTCGGCGAAGCAAGCAGCAACTTCG CTCCCCGCAGCTCCCGCTACTCAGCCCTCAGAGAGACCAGCTACATGAGAAGCGGCTCAGTCCGGCTCAGCTCCC GCAAGTCAGTCCGGTTCGGAGTTTAGCTCAGGGGCAGCCCCTCAGCCCTCAACGAGGCAAAGTACACGAGCAGCA ACTCAGCCCTCAACGAGACAAGATACACGAGCAGCAACTCAGCCCTCAACGAGACAAAGTGCACGAGCAGCAACT CAGCCCTCAACGAGACAAGATACACGAGCAGCAACTCAGCCCTCAACGAGACAAAGTGCACGAGCAGCAACTCCC TCCGGCTCAGCTCCCGCAACTCAGTCCCGTTCGGAGTCCAGCTCAGGAGCAACAGCTGAGCCCTCCCCAGCTCCC ACCACTAAGCCCCCAGCGAGACCAACTACACGACAAGCGGCTCACTCCAGCTCAGCTCCCGAAACTCAATCCCGT TCCGAGTCCAGCTCACGAGCAGCAACTGAAACCCCCCAGCTCCCACCACTAA

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