Protein ID | Ophcf2|05318 |
Gene name | |
Location | scaffold_05:3276397..3278249 |
Strand | - |
Gene length (bp) | 1852 |
Transcript length (bp) | 711 |
Coding sequence length (bp) | 711 |
Protein length (aa) | 237 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 20 | 42 | 22 |
Type of sequence | Sequence |
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Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|05318 MTSRLTARGLELGASLSLGWLLVIILGGGVIVFTGLGLGLAWRLKRIRRRRQRQRDSDMRMGVYCGGETSRTRLT KMSGGGLGSSIPACFRFSSSALFGTRLSSSVSVRLSFRTPQRDQLHEKRLSPAQLPQVSPVRSLAQGQPLSPQRG KIHEQQLSPQRDKVHEQQLPPAQLPQLSPVRSPAQEQQLSPPQLPPLSPQRDQLHDKRLTPAQLPKLNPVPSPAH EQQLKPPSSHH* |
Coding | >Ophcf2|05318 ATGACATCCCGCCTCACCGCCCGAGGTCTCGAGCTCGGCGCCAGCCTCAGCCTCGGCTGGCTCCTGGTAATCATC CTCGGCGGAGGCGTAATCGTCTTCACGGGTCTAGGTCTAGGCCTAGCCTGGCGATTGAAGCGGATCCGACGACGA CGACAGCGGCAGCGAGATTCGGATATGCGGATGGGTGTTTACTGCGGCGGCGAGACTTCGCGGACGAGACTTACA AAGATGTCTGGCGGGGGGTTGGGCAGCAGCATCCCGGCCTGCTTCAGATTCAGCAGTTCGGCCCTGTTCGGAACT CGGCTGTCGAGCAGCGTCTCAGTGCGCCTCAGCTTCCGCACCCCTCAGAGAGACCAGCTACATGAGAAGCGGCTC AGTCCGGCTCAGCTCCCGCAAGTCAGTCCGGTTCGGAGTTTAGCTCAGGGGCAGCCCCTCAGCCCTCAACGAGGC AAAATACACGAGCAGCAACTCAGCCCTCAACGAGACAAAGTGCACGAGCAGCAACTCCCTCCGGCTCAGCTCCCG CAACTCAGTCCCGTTCGGAGTCCAGCTCAGGAGCAACAGCTGAGCCCTCCCCAGCTCCCACCACTAAGCCCCCAG CGAGACCAACTACACGACAAGCGGCTCACTCCAGCTCAGCTCCCGAAACTCAATCCCGTTCCGAGTCCAGCTCAC GAGCAGCAACTGAAACCCCCCAGCTCCCACCACTAA |
Transcript | >Ophcf2|05318 ATGACATCCCGCCTCACCGCCCGAGGTCTCGAGCTCGGCGCCAGCCTCAGCCTCGGCTGGCTCCTGGTAATCATC CTCGGCGGAGGCGTAATCGTCTTCACGGGTCTAGGTCTAGGCCTAGCCTGGCGATTGAAGCGGATCCGACGACGA CGACAGCGGCAGCGAGATTCGGATATGCGGATGGGTGTTTACTGCGGCGGCGAGACTTCGCGGACGAGACTTACA AAGATGTCTGGCGGGGGGTTGGGCAGCAGCATCCCGGCCTGCTTCAGATTCAGCAGTTCGGCCCTGTTCGGAACT CGGCTGTCGAGCAGCGTCTCAGTGCGCCTCAGCTTCCGCACCCCTCAGAGAGACCAGCTACATGAGAAGCGGCTC AGTCCGGCTCAGCTCCCGCAAGTCAGTCCGGTTCGGAGTTTAGCTCAGGGGCAGCCCCTCAGCCCTCAACGAGGC AAAATACACGAGCAGCAACTCAGCCCTCAACGAGACAAAGTGCACGAGCAGCAACTCCCTCCGGCTCAGCTCCCG CAACTCAGTCCCGTTCGGAGTCCAGCTCAGGAGCAACAGCTGAGCCCTCCCCAGCTCCCACCACTAAGCCCCCAG CGAGACCAACTACACGACAAGCGGCTCACTCCAGCTCAGCTCCCGAAACTCAATCCCGTTCCGAGTCCAGCTCAC GAGCAGCAACTGAAACCCCCCAGCTCCCACCACTAA |
Gene | >Ophcf2|05318 ATGACATCCCGCCTCACCGCCCGAGGTCTCGAGCTCGGCGCCAGCCTCAGCCTCGGCTGGCTCCTGGTAATCATC CTCGGCGGAGGCGTAATCGTCTTCACGGGTCTAGGTCTAGGCCTAGCCTGGCGATTGAAGCGGATCCGACGACGA CGACAGCGGCAGCGAGATTCGGATATGCGGATGGGTGTTTACTGCGGCGGCGAGACTTCGCGGACGAGACTTACA AAGATGTCTGGCGGGTATCTGCCCGCTTTGTCGAGTGGGGGGTCTTTGGGGTTTGCGTCTGATGAAGGGGGGGTT AAAGAGGTGGTTGAAGGGAAGATTGGGATTCCGGCTGCGGCGAAGATGGTTCGTAAGTCTGTTACTGATTCGGAT TTACGGCTTATTCTTCGGTCTACGGATGAGAGGTTACGGACTCGCAGCCAAAGTCCCAGCAAGACTCACCCGAAC AGCGCGCCAACTTCACCAACAAAGACAGCCTCCTCACCCCGCAAGCAACCCGCACCAACCAAGGCGACAGACGCG CTTCTCTCGACGGCGACGAACCAGCTTGATGATGCGGAGAGGGTGGAGTGGCAGAGTAGGTTGAGTCCCTTGCGG GGGGGGTCGCCGCGGAGGAGATCGAGGGGGAGTTCGCTTTCGAGTACGCTTTCTACGCTTTATAGTGTTGAGGAG GAGGGGAAGGGAGGGGGAGGGGAGGGGGTTGAGGAGAGGGATCACGTTTATTTCCATGCGGTTGGGAGTCCCGTT CGGGGGGGGAGGGGCGGTTGGGTCAAGTTGAGTCAACAGCAAAAGCAGGGCGGTCCGGTCCAACTCCCTGCTCAA CAAAGACTCAGCCAGCTACAGCCTCAACAGAGGCTCAGCCCGGCTCAGCAACAACAGCCTTCACAAGGACTCAAT CCCAACCAACAACCTCCCAGAGCCCCCCCTTTCCCACCCCCCCCGAAACAACCCCGTCCATCAAGCCAGTCCGGA AGCCCAACTCAGCCCCACGCAGCAGGCCGTCGTGAAGCAACGGCAAAGCCCGACGCGGAAGTCTCTCGGCAGTCC TGCGAGCTTGCAGCAGCGGGGTGCGCCCGTGCAGGGAGAGGGGGTTCAGCAGGGGAAGCTTGGTTCGCTTCCGCT TTTTTCGCGGTTTGGAGCCGATGGGAATCGCGGGCTTGAGATGCAGCTTGATCCGAGTTTGTTTCCGCGGGGGAG TCCTCGACGGGAACAGGGGGTTGGGCAGCAGCATCCCGGCCTGCTTCAGATTCAGCAGTTCGGCCCTGTTCGGAA CTCGGCTGTCGAGCAGCGTCTCAGTGCGCCTCAGCTTCCGCACGTCAGTCCTCGGCGAAGCAAGCAGCAACTTCG CTCCCCGCAGCTCCCGCTACTCAGCCCTCAGAGAGACCAGCTACATGAGAAGCGGCTCAGTCCGGCTCAGCTCCC GCAAGTCAGTCCGGTTCGGAGTTTAGCTCAGGGGCAGCCCCTCAGCCCTCAACGAGGCAAAGTACACGAGCAGCA ACTCAGCCCTCAACGAGACAAGATACACGAGCAGCAACTCAGCCCTCAACGAGACAAAGTGCACGAGCAGCAACT CAGCCCTCAACGAGACAAGATACACGAGCAGCAACTCAGCCCTCAACGAGACAAAGTGCACGAGCAGCAACTCCC TCCGGCTCAGCTCCCGCAACTCAGTCCCGTTCGGAGTCCAGCTCAGGAGCAACAGCTGAGCCCTCCCCAGCTCCC ACCACTAAGCCCCCAGCGAGACCAACTACACGACAAGCGGCTCACTCCAGCTCAGCTCCCGAAACTCAATCCCGT TCCGAGTCCAGCTCACGAGCAGCAACTGAAACCCCCCAGCTCCCACCACTAA |