Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05318
Gene name
Locationscaffold_05:3276397..3278249
Strand-
Gene length (bp)1852
Transcript length (bp)711
Coding sequence length (bp)711
Protein length (aa) 237

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05318
MTSRLTARGLELGASLSLGWLLVIILGGGVIVFTGLGLGLAWRLKRIRRRRQRQRDSDMRMGVYCGGETSRTRLT
KMSGGGLGSSIPACFRFSSSALFGTRLSSSVSVRLSFRTPQRDQLHEKRLSPAQLPQVSPVRSLAQGQPLSPQRG
KIHEQQLSPQRDKVHEQQLPPAQLPQLSPVRSPAQEQQLSPPQLPPLSPQRDQLHDKRLTPAQLPKLNPVPSPAH
EQQLKPPSSHH*
Coding >Ophcf2|05318
ATGACATCCCGCCTCACCGCCCGAGGTCTCGAGCTCGGCGCCAGCCTCAGCCTCGGCTGGCTCCTGGTAATCATC
CTCGGCGGAGGCGTAATCGTCTTCACGGGTCTAGGTCTAGGCCTAGCCTGGCGATTGAAGCGGATCCGACGACGA
CGACAGCGGCAGCGAGATTCGGATATGCGGATGGGTGTTTACTGCGGCGGCGAGACTTCGCGGACGAGACTTACA
AAGATGTCTGGCGGGGGGTTGGGCAGCAGCATCCCGGCCTGCTTCAGATTCAGCAGTTCGGCCCTGTTCGGAACT
CGGCTGTCGAGCAGCGTCTCAGTGCGCCTCAGCTTCCGCACCCCTCAGAGAGACCAGCTACATGAGAAGCGGCTC
AGTCCGGCTCAGCTCCCGCAAGTCAGTCCGGTTCGGAGTTTAGCTCAGGGGCAGCCCCTCAGCCCTCAACGAGGC
AAAATACACGAGCAGCAACTCAGCCCTCAACGAGACAAAGTGCACGAGCAGCAACTCCCTCCGGCTCAGCTCCCG
CAACTCAGTCCCGTTCGGAGTCCAGCTCAGGAGCAACAGCTGAGCCCTCCCCAGCTCCCACCACTAAGCCCCCAG
CGAGACCAACTACACGACAAGCGGCTCACTCCAGCTCAGCTCCCGAAACTCAATCCCGTTCCGAGTCCAGCTCAC
GAGCAGCAACTGAAACCCCCCAGCTCCCACCACTAA
Transcript >Ophcf2|05318
ATGACATCCCGCCTCACCGCCCGAGGTCTCGAGCTCGGCGCCAGCCTCAGCCTCGGCTGGCTCCTGGTAATCATC
CTCGGCGGAGGCGTAATCGTCTTCACGGGTCTAGGTCTAGGCCTAGCCTGGCGATTGAAGCGGATCCGACGACGA
CGACAGCGGCAGCGAGATTCGGATATGCGGATGGGTGTTTACTGCGGCGGCGAGACTTCGCGGACGAGACTTACA
AAGATGTCTGGCGGGGGGTTGGGCAGCAGCATCCCGGCCTGCTTCAGATTCAGCAGTTCGGCCCTGTTCGGAACT
CGGCTGTCGAGCAGCGTCTCAGTGCGCCTCAGCTTCCGCACCCCTCAGAGAGACCAGCTACATGAGAAGCGGCTC
AGTCCGGCTCAGCTCCCGCAAGTCAGTCCGGTTCGGAGTTTAGCTCAGGGGCAGCCCCTCAGCCCTCAACGAGGC
AAAATACACGAGCAGCAACTCAGCCCTCAACGAGACAAAGTGCACGAGCAGCAACTCCCTCCGGCTCAGCTCCCG
CAACTCAGTCCCGTTCGGAGTCCAGCTCAGGAGCAACAGCTGAGCCCTCCCCAGCTCCCACCACTAAGCCCCCAG
CGAGACCAACTACACGACAAGCGGCTCACTCCAGCTCAGCTCCCGAAACTCAATCCCGTTCCGAGTCCAGCTCAC
GAGCAGCAACTGAAACCCCCCAGCTCCCACCACTAA
Gene >Ophcf2|05318
ATGACATCCCGCCTCACCGCCCGAGGTCTCGAGCTCGGCGCCAGCCTCAGCCTCGGCTGGCTCCTGGTAATCATC
CTCGGCGGAGGCGTAATCGTCTTCACGGGTCTAGGTCTAGGCCTAGCCTGGCGATTGAAGCGGATCCGACGACGA
CGACAGCGGCAGCGAGATTCGGATATGCGGATGGGTGTTTACTGCGGCGGCGAGACTTCGCGGACGAGACTTACA
AAGATGTCTGGCGGGTATCTGCCCGCTTTGTCGAGTGGGGGGTCTTTGGGGTTTGCGTCTGATGAAGGGGGGGTT
AAAGAGGTGGTTGAAGGGAAGATTGGGATTCCGGCTGCGGCGAAGATGGTTCGTAAGTCTGTTACTGATTCGGAT
TTACGGCTTATTCTTCGGTCTACGGATGAGAGGTTACGGACTCGCAGCCAAAGTCCCAGCAAGACTCACCCGAAC
AGCGCGCCAACTTCACCAACAAAGACAGCCTCCTCACCCCGCAAGCAACCCGCACCAACCAAGGCGACAGACGCG
CTTCTCTCGACGGCGACGAACCAGCTTGATGATGCGGAGAGGGTGGAGTGGCAGAGTAGGTTGAGTCCCTTGCGG
GGGGGGTCGCCGCGGAGGAGATCGAGGGGGAGTTCGCTTTCGAGTACGCTTTCTACGCTTTATAGTGTTGAGGAG
GAGGGGAAGGGAGGGGGAGGGGAGGGGGTTGAGGAGAGGGATCACGTTTATTTCCATGCGGTTGGGAGTCCCGTT
CGGGGGGGGAGGGGCGGTTGGGTCAAGTTGAGTCAACAGCAAAAGCAGGGCGGTCCGGTCCAACTCCCTGCTCAA
CAAAGACTCAGCCAGCTACAGCCTCAACAGAGGCTCAGCCCGGCTCAGCAACAACAGCCTTCACAAGGACTCAAT
CCCAACCAACAACCTCCCAGAGCCCCCCCTTTCCCACCCCCCCCGAAACAACCCCGTCCATCAAGCCAGTCCGGA
AGCCCAACTCAGCCCCACGCAGCAGGCCGTCGTGAAGCAACGGCAAAGCCCGACGCGGAAGTCTCTCGGCAGTCC
TGCGAGCTTGCAGCAGCGGGGTGCGCCCGTGCAGGGAGAGGGGGTTCAGCAGGGGAAGCTTGGTTCGCTTCCGCT
TTTTTCGCGGTTTGGAGCCGATGGGAATCGCGGGCTTGAGATGCAGCTTGATCCGAGTTTGTTTCCGCGGGGGAG
TCCTCGACGGGAACAGGGGGTTGGGCAGCAGCATCCCGGCCTGCTTCAGATTCAGCAGTTCGGCCCTGTTCGGAA
CTCGGCTGTCGAGCAGCGTCTCAGTGCGCCTCAGCTTCCGCACGTCAGTCCTCGGCGAAGCAAGCAGCAACTTCG
CTCCCCGCAGCTCCCGCTACTCAGCCCTCAGAGAGACCAGCTACATGAGAAGCGGCTCAGTCCGGCTCAGCTCCC
GCAAGTCAGTCCGGTTCGGAGTTTAGCTCAGGGGCAGCCCCTCAGCCCTCAACGAGGCAAAGTACACGAGCAGCA
ACTCAGCCCTCAACGAGACAAGATACACGAGCAGCAACTCAGCCCTCAACGAGACAAAGTGCACGAGCAGCAACT
CAGCCCTCAACGAGACAAGATACACGAGCAGCAACTCAGCCCTCAACGAGACAAAGTGCACGAGCAGCAACTCCC
TCCGGCTCAGCTCCCGCAACTCAGTCCCGTTCGGAGTCCAGCTCAGGAGCAACAGCTGAGCCCTCCCCAGCTCCC
ACCACTAAGCCCCCAGCGAGACCAACTACACGACAAGCGGCTCACTCCAGCTCAGCTCCCGAAACTCAATCCCGT
TCCGAGTCCAGCTCACGAGCAGCAACTGAAACCCCCCAGCTCCCACCACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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