Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05312
Gene name
Locationscaffold_05:3263602..3264512
Strand+
Gene length (bp)910
Transcript length (bp)783
Coding sequence length (bp)783
Protein length (aa) 261

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20238 DUF6595 Family of unknown function (DUF6595) 3.9E-32 19 164

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 15 0.45

Transmembrane Domains

Domain # Start End Length
1 196 218 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05312
MLLRRLGFVAAVAAQQHLGPAAFLWPPDRVWGSAAGHTAPCGSVTGVGNRTEFPLRNARVALVAQDDSWDAQIAI
AFRADPKSDADFSLLTNPSFLRNSDPGHSCLAVADAAPSARAGDKATLQIRYSSGYDDANQEFLYACTDIIFVRP
ERFRPPSLSCFNASVVETDYDDMPWPDGFAAPADDGDDGRLSGGAIAGIVVAAVSLTLLLLTAALLLYRRRQQRS
RSLRQQNSLRAVKWDEQAAARGPDSPVNVKLRDLS*
Coding >Ophcf2|05312
ATGCTTCTTCGGCGTCTCGGTTTCGTCGCTGCCGTCGCTGCTCAGCAGCATCTTGGCCCTGCCGCGTTTTTGTGG
CCTCCGGACCGGGTGTGGGGGTCGGCGGCCGGACATACGGCTCCGTGCGGGTCCGTAACGGGCGTGGGGAACCGG
ACCGAGTTTCCGCTACGGAACGCGAGAGTCGCTCTAGTCGCTCAGGACGACTCATGGGATGCCCAAATCGCCATC
GCCTTCCGAGCCGATCCCAAGTCCGACGCAGACTTCTCCCTCCTGACGAACCCATCCTTCCTCCGGAACAGCGAT
CCGGGCCACAGCTGCCTCGCCGTCGCCGATGCCGCTCCCTCGGCCCGCGCCGGAGATAAGGCCACGCTCCAGATC
CGGTACAGCTCCGGCTACGACGATGCGAACCAGGAGTTTCTCTACGCCTGCACCGACATCATCTTCGTTCGGCCG
GAGCGCTTCCGTCCGCCGTCGCTGTCGTGCTTCAACGCCTCCGTCGTCGAGACGGATTACGACGATATGCCTTGG
CCCGATGGCTTTGCTGCTCCGGCCGATGACGGAGACGACGGTCGGCTTTCGGGGGGTGCCATTGCGGGAATCGTC
GTTGCGGCCGTTTCCTTGACCTTGTTGCTACTCACCGCGGCGCTGTTGCTCTATCGTCGTAGACAGCAGCGGTCA
CGCAGCTTGCGGCAGCAGAACTCTCTTCGTGCTGTCAAGTGGGATGAGCAGGCTGCCGCTCGCGGGCCCGATTCC
CCGGTCAACGTGAAGCTGAGGGATTTGTCGTAG
Transcript >Ophcf2|05312
ATGCTTCTTCGGCGTCTCGGTTTCGTCGCTGCCGTCGCTGCTCAGCAGCATCTTGGCCCTGCCGCGTTTTTGTGG
CCTCCGGACCGGGTGTGGGGGTCGGCGGCCGGACATACGGCTCCGTGCGGGTCCGTAACGGGCGTGGGGAACCGG
ACCGAGTTTCCGCTACGGAACGCGAGAGTCGCTCTAGTCGCTCAGGACGACTCATGGGATGCCCAAATCGCCATC
GCCTTCCGAGCCGATCCCAAGTCCGACGCAGACTTCTCCCTCCTGACGAACCCATCCTTCCTCCGGAACAGCGAT
CCGGGCCACAGCTGCCTCGCCGTCGCCGATGCCGCTCCCTCGGCCCGCGCCGGAGATAAGGCCACGCTCCAGATC
CGGTACAGCTCCGGCTACGACGATGCGAACCAGGAGTTTCTCTACGCCTGCACCGACATCATCTTCGTTCGGCCG
GAGCGCTTCCGTCCGCCGTCGCTGTCGTGCTTCAACGCCTCCGTCGTCGAGACGGATTACGACGATATGCCTTGG
CCCGATGGCTTTGCTGCTCCGGCCGATGACGGAGACGACGGTCGGCTTTCGGGGGGTGCCATTGCGGGAATCGTC
GTTGCGGCCGTTTCCTTGACCTTGTTGCTACTCACCGCGGCGCTGTTGCTCTATCGTCGTAGACAGCAGCGGTCA
CGCAGCTTGCGGCAGCAGAACTCTCTTCGTGCTGTCAAGTGGGATGAGCAGGCTGCCGCTCGCGGGCCCGATTCC
CCGGTCAACGTGAAGCTGAGGGATTTGTCGTAG
Gene >Ophcf2|05312
ATGCTTCTTCGGCGTCTCGGTTTCGTCGCTGCCGTCGCTGCTCAGCAGCATCTTGGCCCTGCCGCGTTTTTGTGG
CCTCCGGACCGGGTGTGGGGGTCGGCGGCCGGACATACGGCTCCGTGCGGGTCCGTAACGGGCGTGGGGAACCGG
ACCGAGTTTCCGCTACGTGAGGACCTCATCCCTCCCGTCGACTCCGTCTCTGTTCTCTTGACTGATGATTAAGCA
CAAAACGACTCACAGGGAACGCGAGAGTCGCTCTAGTCGCTCAGGACGACTCATGGGATGCCCAAATCGCCATCG
CCTTCCGAGCCGGTCCGCCTCAACCCGGACGAAAAAGACGGAGCCGGAAGCTGACAAGGGAACAGATCCCAAGTC
CGACGCAGACTTCTCCCTCCTGACGAACCCATCCTTCCTCCGGAACAGCGATCCGGGCCACAGCTGCCTCGCCGT
CGCCGATGCCGCTCCCTCGGCCCGCGCCGGAGATAAGGCCACGCTCCAGATCCGGTACAGCTCCGGCTACGACGA
TGCGAACCAGGAGTTTCTCTACGCCTGCACCGACATCATCTTCGTTCGGCCGGAGCGCTTCCGTCCGCCGTCGCT
GTCGTGCTTCAACGCCTCCGTCGTCGAGACGGATTACGACGATATGCCTTGGCCCGATGGCTTTGCTGCTCCGGC
CGATGACGGAGACGACGGTCGGCTTTCGGGGGGTGCCATTGCGGGAATCGTCGTTGCGGCCGTTTCCTTGACCTT
GTTGCTACTCACCGCGGCGCTGTTGCTCTATCGTCGTAGACAGCAGCGGTCACGCAGCTTGCGGCAGCAGAACTC
TCTTCGTGCTGTCAAGTGGGATGAGCAGGCTGCCGCTCGCGGGCCCGATTCCCCGGTCAACGTGAAGCTGAGGGA
TTTGTCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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