Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05312
Gene name
Locationscaffold_05:3263602..3264512
Strand+
Gene length (bp)910
Transcript length (bp)783
Coding sequence length (bp)783
Protein length (aa) 261

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20238 DUF6595 Family of unknown function (DUF6595) 3.9E-32 19 164

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane Signal peptide|Transmembrane domain 0.1231 0.0934 0.2975 0.6224 0.1623 0.0075 0.1322 0.4857 0.275 0.0321

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 196 218 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup337
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|1921
Ophiocordyceps camponoti-floridani Ophcf2|03744
Ophiocordyceps camponoti-floridani Ophcf2|05312 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|4115
Ophiocordyceps camponoti-rufipedis Ophun1|5809
Ophiocordyceps kimflemingae Ophio5|388
Ophiocordyceps kimflemingae Ophio5|8115
Ophiocordyceps subramaniannii Hirsu2|409
Ophiocordyceps subramaniannii Hirsu2|6076

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05312
MLLRRLGFVAAVAAQQHLGPAAFLWPPDRVWGSAAGHTAPCGSVTGVGNRTEFPLRNARVALVAQDDSWDAQIAI
AFRADPKSDADFSLLTNPSFLRNSDPGHSCLAVADAAPSARAGDKATLQIRYSSGYDDANQEFLYACTDIIFVRP
ERFRPPSLSCFNASVVETDYDDMPWPDGFAAPADDGDDGRLSGGAIAGIVVAAVSLTLLLLTAALLLYRRRQQRS
RSLRQQNSLRAVKWDEQAAARGPDSPVNVKLRDLS*
Coding >Ophcf2|05312
ATGCTTCTTCGGCGTCTCGGTTTCGTCGCTGCCGTCGCTGCTCAGCAGCATCTTGGCCCTGCCGCGTTTTTGTGG
CCTCCGGACCGGGTGTGGGGGTCGGCGGCCGGACATACGGCTCCGTGCGGGTCCGTAACGGGCGTGGGGAACCGG
ACCGAGTTTCCGCTACGGAACGCGAGAGTCGCTCTAGTCGCTCAGGACGACTCATGGGATGCCCAAATCGCCATC
GCCTTCCGAGCCGATCCCAAGTCCGACGCAGACTTCTCCCTCCTGACGAACCCATCCTTCCTCCGGAACAGCGAT
CCGGGCCACAGCTGCCTCGCCGTCGCCGATGCCGCTCCCTCGGCCCGCGCCGGAGATAAGGCCACGCTCCAGATC
CGGTACAGCTCCGGCTACGACGATGCGAACCAGGAGTTTCTCTACGCCTGCACCGACATCATCTTCGTTCGGCCG
GAGCGCTTCCGTCCGCCGTCGCTGTCGTGCTTCAACGCCTCCGTCGTCGAGACGGATTACGACGATATGCCTTGG
CCCGATGGCTTTGCTGCTCCGGCCGATGACGGAGACGACGGTCGGCTTTCGGGGGGTGCCATTGCGGGAATCGTC
GTTGCGGCCGTTTCCTTGACCTTGTTGCTACTCACCGCGGCGCTGTTGCTCTATCGTCGTAGACAGCAGCGGTCA
CGCAGCTTGCGGCAGCAGAACTCTCTTCGTGCTGTCAAGTGGGATGAGCAGGCTGCCGCTCGCGGGCCCGATTCC
CCGGTCAACGTGAAGCTGAGGGATTTGTCGTAG
Transcript >Ophcf2|05312
ATGCTTCTTCGGCGTCTCGGTTTCGTCGCTGCCGTCGCTGCTCAGCAGCATCTTGGCCCTGCCGCGTTTTTGTGG
CCTCCGGACCGGGTGTGGGGGTCGGCGGCCGGACATACGGCTCCGTGCGGGTCCGTAACGGGCGTGGGGAACCGG
ACCGAGTTTCCGCTACGGAACGCGAGAGTCGCTCTAGTCGCTCAGGACGACTCATGGGATGCCCAAATCGCCATC
GCCTTCCGAGCCGATCCCAAGTCCGACGCAGACTTCTCCCTCCTGACGAACCCATCCTTCCTCCGGAACAGCGAT
CCGGGCCACAGCTGCCTCGCCGTCGCCGATGCCGCTCCCTCGGCCCGCGCCGGAGATAAGGCCACGCTCCAGATC
CGGTACAGCTCCGGCTACGACGATGCGAACCAGGAGTTTCTCTACGCCTGCACCGACATCATCTTCGTTCGGCCG
GAGCGCTTCCGTCCGCCGTCGCTGTCGTGCTTCAACGCCTCCGTCGTCGAGACGGATTACGACGATATGCCTTGG
CCCGATGGCTTTGCTGCTCCGGCCGATGACGGAGACGACGGTCGGCTTTCGGGGGGTGCCATTGCGGGAATCGTC
GTTGCGGCCGTTTCCTTGACCTTGTTGCTACTCACCGCGGCGCTGTTGCTCTATCGTCGTAGACAGCAGCGGTCA
CGCAGCTTGCGGCAGCAGAACTCTCTTCGTGCTGTCAAGTGGGATGAGCAGGCTGCCGCTCGCGGGCCCGATTCC
CCGGTCAACGTGAAGCTGAGGGATTTGTCGTAG
Gene >Ophcf2|05312
ATGCTTCTTCGGCGTCTCGGTTTCGTCGCTGCCGTCGCTGCTCAGCAGCATCTTGGCCCTGCCGCGTTTTTGTGG
CCTCCGGACCGGGTGTGGGGGTCGGCGGCCGGACATACGGCTCCGTGCGGGTCCGTAACGGGCGTGGGGAACCGG
ACCGAGTTTCCGCTACGTGAGGACCTCATCCCTCCCGTCGACTCCGTCTCTGTTCTCTTGACTGATGATTAAGCA
CAAAACGACTCACAGGGAACGCGAGAGTCGCTCTAGTCGCTCAGGACGACTCATGGGATGCCCAAATCGCCATCG
CCTTCCGAGCCGGTCCGCCTCAACCCGGACGAAAAAGACGGAGCCGGAAGCTGACAAGGGAACAGATCCCAAGTC
CGACGCAGACTTCTCCCTCCTGACGAACCCATCCTTCCTCCGGAACAGCGATCCGGGCCACAGCTGCCTCGCCGT
CGCCGATGCCGCTCCCTCGGCCCGCGCCGGAGATAAGGCCACGCTCCAGATCCGGTACAGCTCCGGCTACGACGA
TGCGAACCAGGAGTTTCTCTACGCCTGCACCGACATCATCTTCGTTCGGCCGGAGCGCTTCCGTCCGCCGTCGCT
GTCGTGCTTCAACGCCTCCGTCGTCGAGACGGATTACGACGATATGCCTTGGCCCGATGGCTTTGCTGCTCCGGC
CGATGACGGAGACGACGGTCGGCTTTCGGGGGGTGCCATTGCGGGAATCGTCGTTGCGGCCGTTTCCTTGACCTT
GTTGCTACTCACCGCGGCGCTGTTGCTCTATCGTCGTAGACAGCAGCGGTCACGCAGCTTGCGGCAGCAGAACTC
TCTTCGTGCTGTCAAGTGGGATGAGCAGGCTGCCGCTCGCGGGCCCGATTCCCCGGTCAACGTGAAGCTGAGGGA
TTTGTCGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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