Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05307
Gene name
Locationscaffold_05:3204725..3206596
Strand+
Gene length (bp)1871
Transcript length (bp)1701
Coding sequence length (bp)1701
Protein length (aa) 567

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00324 AA_permease Amino acid permease 5.3E-133 63 524
PF13520 AA_permease_2 Amino acid permease 9.2E-30 62 496

GO

GO Term Description Terminal node
GO:0022857 transmembrane transporter activity Yes
GO:0016020 membrane Yes
GO:0055085 transmembrane transport Yes
GO:0005575 cellular_component No
GO:0051179 localization No
GO:0008150 biological_process No
GO:0006810 transport No
GO:0009987 cellular process No
GO:0003674 molecular_function No
GO:0005215 transporter activity No
GO:0110165 cellular anatomical entity No
GO:0051234 establishment of localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 44 0.45

Transmembrane Domains

Domain # Start End Length
1 64 86 22
2 93 115 22
3 144 166 22
4 173 195 22
5 199 221 22
6 290 309 19
7 344 366 22
8 387 409 22
9 419 441 22
10 461 483 22
11 503 520 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Fungus Fungus in pure culture 302.28 143.93 460.64
Alive In ants, during behavior modification 431.29 16.70 845.87
Dead In ants, recently dead 196.17 89.74 302.59

Differential expression

Label1 Label2 Q-value Significant difference
Alive Fungus 0.290922 no
Alive Dead 0.012565 yes
Dead Fungus 0.063325 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05307
MTDPEKSGVGVEESKVLEASPAFAATFQDEDKWTRCGLSLKSFQKRHYGRGVVELDRSIKTRHLHMIAIGGSIGA
GFFVGSGSALSKGGPASLLLCFAIVGFMVFNIVFALGELAIMYPISGGFYTYATRFVDPSFGFAVGWNYLFLWLS
VLPLELTVCSLVIQYWDEKTSVAVWITIFLVAVIVINIFGGLGFAEEEFVASMIKLTAITSFLIIALVLVLGGGP
RDGRYNEYWGARYWFEPGAFRNGLRGFCSVFVTAAFSLTGTELVGLAAAETRNPVKSLPGAVKRVFWRIVVFYIL
GLFFVGLLISSEDSRLLANKAITDVKASPWVLIGLYARLKGLDHFMNAIILVSVLSIGVSSVYGGSRTLTALAQQ
GYAPKLFTYIDRSGRPLPAVILIILTGPLAYVNLNASGPVVFEWLQALSGLAVMFSWAAICLAHIRFRKAWAYNG
HSLDEIPFQALLGVWGSWISLTLCFLVLAAQFYTAIKPVGKPGFNTVEGFFKNWLAFPVVIAFWICGSVWKRSGW
LRIDQIDVDTGRRELDWEEVRAYRDHVQRLPAWRRVLHKLF*
Coding >Ophcf2|05307
ATGACGGATCCGGAGAAGAGCGGCGTGGGCGTGGAAGAGTCCAAGGTGCTCGAAGCCAGCCCTGCGTTCGCGGCC
ACGTTCCAGGATGAGGACAAGTGGACGAGATGCGGCCTCAGCCTCAAGTCGTTCCAGAAGCGACATTATGGCCGC
GGCGTGGTCGAGCTGGATCGGTCCATCAAGACGCGTCATCTGCATATGATTGCCATCGGAGGTTCCATAGGCGCT
GGTTTCTTCGTCGGCTCCGGCAGTGCTCTCAGCAAAGGCGGTCCTGCTTCTCTGTTGCTGTGCTTCGCCATTGTC
GGCTTCATGGTCTTCAATATCGTATTCGCTCTCGGTGAACTCGCCATCATGTATCCCATCTCGGGCGGCTTCTAC
ACCTACGCGACCCGTTTCGTCGACCCTTCATTCGGCTTCGCCGTCGGTTGGAACTACCTCTTCCTATGGCTCAGC
GTGCTGCCGCTTGAACTGACCGTCTGCTCGCTCGTGATACAATACTGGGACGAAAAGACGAGCGTGGCGGTCTGG
ATAACCATCTTCCTCGTTGCCGTCATCGTCATCAACATATTTGGCGGCCTAGGCTTCGCCGAGGAGGAGTTTGTC
GCCTCTATGATCAAGTTGACGGCCATTACCTCGTTCCTCATCATCGCTCTCGTCCTGGTACTCGGAGGAGGGCCT
CGAGATGGCCGCTATAACGAGTACTGGGGCGCGCGCTATTGGTTCGAGCCCGGCGCGTTTCGCAACGGCCTTCGA
GGCTTCTGCTCCGTCTTCGTCACCGCTGCCTTTTCGCTGACCGGCACGGAGCTCGTTGGCCTCGCGGCGGCTGAG
ACGCGGAATCCGGTCAAATCGTTGCCTGGCGCCGTGAAGCGCGTCTTCTGGCGCATCGTCGTCTTCTACATCCTC
GGTCTGTTCTTCGTCGGATTGCTTATTTCCTCAGAAGACTCTCGGCTCCTGGCCAACAAGGCTATTACCGATGTC
AAGGCCTCACCTTGGGTCCTGATCGGACTCTATGCCCGTCTTAAGGGTCTCGACCACTTTATGAACGCCATCATT
CTCGTCTCCGTCCTGTCCATCGGCGTCTCCAGCGTGTACGGCGGGTCCCGGACACTCACGGCGCTCGCTCAGCAA
GGTTACGCTCCGAAGCTGTTCACCTACATTGATCGATCAGGACGACCGCTGCCCGCCGTCATACTCATCATCTTG
ACAGGGCCTCTCGCCTATGTCAACCTCAACGCCTCGGGCCCCGTCGTCTTTGAATGGTTACAGGCTCTCTCCGGG
CTGGCCGTCATGTTCTCTTGGGCCGCTATCTGCCTGGCTCATATCCGCTTCCGCAAAGCCTGGGCCTATAATGGG
CACTCGCTCGACGAGATTCCCTTCCAGGCGCTTCTCGGCGTCTGGGGTTCCTGGATTTCTCTCACCCTGTGCTTC
TTGGTCCTCGCCGCTCAATTCTACACGGCCATCAAGCCCGTCGGGAAGCCGGGCTTCAACACGGTCGAGGGCTTC
TTCAAGAACTGGCTCGCCTTTCCCGTCGTCATCGCTTTCTGGATTTGCGGCTCCGTTTGGAAACGATCCGGCTGG
CTCCGCATCGATCAGATCGACGTCGACACCGGCCGCCGCGAGCTGGACTGGGAGGAGGTCAGGGCGTACCGCGAT
CATGTCCAACGGCTACCGGCATGGCGTCGGGTTTTGCACAAGCTCTTTTGA
Transcript >Ophcf2|05307
ATGACGGATCCGGAGAAGAGCGGCGTGGGCGTGGAAGAGTCCAAGGTGCTCGAAGCCAGCCCTGCGTTCGCGGCC
ACGTTCCAGGATGAGGACAAGTGGACGAGATGCGGCCTCAGCCTCAAGTCGTTCCAGAAGCGACATTATGGCCGC
GGCGTGGTCGAGCTGGATCGGTCCATCAAGACGCGTCATCTGCATATGATTGCCATCGGAGGTTCCATAGGCGCT
GGTTTCTTCGTCGGCTCCGGCAGTGCTCTCAGCAAAGGCGGTCCTGCTTCTCTGTTGCTGTGCTTCGCCATTGTC
GGCTTCATGGTCTTCAATATCGTATTCGCTCTCGGTGAACTCGCCATCATGTATCCCATCTCGGGCGGCTTCTAC
ACCTACGCGACCCGTTTCGTCGACCCTTCATTCGGCTTCGCCGTCGGTTGGAACTACCTCTTCCTATGGCTCAGC
GTGCTGCCGCTTGAACTGACCGTCTGCTCGCTCGTGATACAATACTGGGACGAAAAGACGAGCGTGGCGGTCTGG
ATAACCATCTTCCTCGTTGCCGTCATCGTCATCAACATATTTGGCGGCCTAGGCTTCGCCGAGGAGGAGTTTGTC
GCCTCTATGATCAAGTTGACGGCCATTACCTCGTTCCTCATCATCGCTCTCGTCCTGGTACTCGGAGGAGGGCCT
CGAGATGGCCGCTATAACGAGTACTGGGGCGCGCGCTATTGGTTCGAGCCCGGCGCGTTTCGCAACGGCCTTCGA
GGCTTCTGCTCCGTCTTCGTCACCGCTGCCTTTTCGCTGACCGGCACGGAGCTCGTTGGCCTCGCGGCGGCTGAG
ACGCGGAATCCGGTCAAATCGTTGCCTGGCGCCGTGAAGCGCGTCTTCTGGCGCATCGTCGTCTTCTACATCCTC
GGTCTGTTCTTCGTCGGATTGCTTATTTCCTCAGAAGACTCTCGGCTCCTGGCCAACAAGGCTATTACCGATGTC
AAGGCCTCACCTTGGGTCCTGATCGGACTCTATGCCCGTCTTAAGGGTCTCGACCACTTTATGAACGCCATCATT
CTCGTCTCCGTCCTGTCCATCGGCGTCTCCAGCGTGTACGGCGGGTCCCGGACACTCACGGCGCTCGCTCAGCAA
GGTTACGCTCCGAAGCTGTTCACCTACATTGATCGATCAGGACGACCGCTGCCCGCCGTCATACTCATCATCTTG
ACAGGGCCTCTCGCCTATGTCAACCTCAACGCCTCGGGCCCCGTCGTCTTTGAATGGTTACAGGCTCTCTCCGGG
CTGGCCGTCATGTTCTCTTGGGCCGCTATCTGCCTGGCTCATATCCGCTTCCGCAAAGCCTGGGCCTATAATGGG
CACTCGCTCGACGAGATTCCCTTCCAGGCGCTTCTCGGCGTCTGGGGTTCCTGGATTTCTCTCACCCTGTGCTTC
TTGGTCCTCGCCGCTCAATTCTACACGGCCATCAAGCCCGTCGGGAAGCCGGGCTTCAACACGGTCGAGGGCTTC
TTCAAGAACTGGCTCGCCTTTCCCGTCGTCATCGCTTTCTGGATTTGCGGCTCCGTTTGGAAACGATCCGGCTGG
CTCCGCATCGATCAGATCGACGTCGACACCGGCCGCCGCGAGCTGGACTGGGAGGAGGTCAGGGCGTACCGCGAT
CATGTCCAACGGCTACCGGCATGGCGTCGGGTTTTGCACAAGCTCTTTTGA
Gene >Ophcf2|05307
ATGACGGATCCGGAGAAGAGCGGCGTGGGCGTGGAAGAGTCCAAGGTGCTCGAAGCCAGCCCTGCGTTCGCGGCC
ACGTTCCAGGATGAGGACAAGTGGACGAGATGCGGCCTCAGCCTCAAGTCGTTCCAGAAGCGACATTATGGCCGC
GGCGTGGTCGAGCTGGATCGGTCCATCAAGACGCGTCATCTGCATATGATTGCCATCGGAGGTTCCATAGGCGCT
GGTTTCTTCGTCGGCTCCGGCAGTGCTCTCAGCAAAGGCGTGAGTTAGGACTGTATGTTGTATTGGTGAAAAGAA
GGCTGGCTGACGGCGTTGTCAAAGGGTCCTGCTTCTCTGTTGCTGTGCTTCGCCATTGTCGGCTTCATGGTCTTC
AATATCGGTATGAAAGAAGCCAGTCGATCGTTTGGACGCCCTTGACTCACGCTTTCCAGTATTCGCTCTCGGTGA
ACTCGCCATCATGTATCCCATCTCGGGCGGCTTCTACACCTACGCGACCCGTTTCGTCGACCCTTCATTCGGCTT
CGCCGTCGGTTGGAACTACCTCTTCCTATGGCTCAGCGTGCTGCCGCTTGAACTGACCGTCTGCTCGCTCGTGAT
ACAATACTGGGACGAAAAGACGAGCGTGGCGGTCTGGATAACCATCTTCCTCGTTGCCGTCATCGTCATCAACAT
ATTTGGCGGCCTAGGCTTCGCCGAGGAGGAGTTTGTCGCCTCTATGATCAAGTTGACGGCCATTACCTCGTTCCT
CATCATCGCTCTCGTCCTGGTACTCGGAGGAGGGCCTCGAGATGGCCGCTATAACGAGTACTGGGGCGCGCGCTA
TTGGTTCGAGCCCGGCGCGTTTCGCAACGGCCTTCGAGGCTTCTGCTCCGTCTTCGTCACCGCTGCCTTTTCGCT
GACCGGCACGGAGCTCGTTGGCCTCGCGGCGGCTGAGACGCGGAATCCGGTCAAATCGTTGCCTGGCGCCGTGAA
GCGCGTCTTCTGGCGCATCGTCGTCTTCTACATCCTCGGTCTGTTCTTCGTCGGATTGCTTATTTCCTCAGAAGA
CTCTCGGCTCCTGGCCAACAAGGCTATTACCGATGTCAAGGCCTCACCTTGGGTCCTGATCGGACTCTATGCCCG
TCTTAAGGGTCTCGACCACTTTATGAACGCCATCATTCTCGTCTCCGTCCTGTCCATCGGCGTCTCCAGCGTGTA
CGGCGGGTCCCGGACACTCACGGCGCTCGCTCAGCAAGGTTACGCTCCGAAGCTGTTCACCTACATTGATCGATC
AGGACGACCGCTGCCCGCCGTCATACTCATCATCTTGACAGGGCCTCTCGCCTATGTCAACCTCAACGCCTCGGG
CCCCGTCGTCTTTGAATGGTTACAGGCTCTCTCCGGGCTGGCCGTCATGTTCTCTTGGGCCGCTATCTGCCTGGC
TCATATCCGCTTCCGCAAAGCCTGGGCCTATAATGGGCACTCGCTCGACGAGATTCCCTTCCAGGCGCTTCTCGG
CGTCTGGGGTTCCTGGATTTCTCTCACCCTGTGCTTCTTGGTCCTCGCCGCTCAAGTAGGTCGTTAAAAATGTCT
TTTAGAGAGAGGAACAGTCATTGATGAAACGTCTGCAGTTCTACACGGCCATCAAGCCCGTCGGGAAGCCGGGCT
TCAACACGGTCGAGGGCTTCTTCAAGAACTGGCTCGCCTTTCCCGTCGTCATCGCTTTCTGGATTTGCGGCTCCG
TTTGGAAACGATCCGGCTGGCTCCGCATCGATCAGATCGACGTCGACACCGGCCGCCGCGAGCTGGACTGGGAGG
AGGTCAGGGCGTACCGCGATCATGTCCAACGGCTACCGGCATGGCGTCGGGTTTTGCACAAGCTCTTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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