Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05307
Gene name
Locationscaffold_05:3204725..3206596
Strand+
Gene length (bp)1871
Transcript length (bp)1701
Coding sequence length (bp)1701
Protein length (aa) 567

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00324 AA_permease Amino acid permease 5.3E-133 63 524
PF13520 AA_permease_2 Amino acid permease 9.2E-30 62 496

GO

GO Term Description Terminal node
GO:0022857 transmembrane transporter activity Yes
GO:0016020 membrane Yes
GO:0055085 transmembrane transport Yes
GO:0005575 cellular_component No
GO:0051179 localization No
GO:0008150 biological_process No
GO:0006810 transport No
GO:0009987 cellular process No
GO:0003674 molecular_function No
GO:0005215 transporter activity No
GO:0110165 cellular anatomical entity No
GO:0051234 establishment of localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 44 0.45

Transmembrane Domains

Domain # Start End Length
1 64 86 22
2 93 115 22
3 144 166 22
4 173 195 22
5 199 221 22
6 290 309 19
7 344 366 22
8 387 409 22
9 419 441 22
10 461 483 22
11 503 520 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05307
MTDPEKSGVGVEESKVLEASPAFAATFQDEDKWTRCGLSLKSFQKRHYGRGVVELDRSIKTRHLHMIAIGGSIGA
GFFVGSGSALSKGGPASLLLCFAIVGFMVFNIVFALGELAIMYPISGGFYTYATRFVDPSFGFAVGWNYLFLWLS
VLPLELTVCSLVIQYWDEKTSVAVWITIFLVAVIVINIFGGLGFAEEEFVASMIKLTAITSFLIIALVLVLGGGP
RDGRYNEYWGARYWFEPGAFRNGLRGFCSVFVTAAFSLTGTELVGLAAAETRNPVKSLPGAVKRVFWRIVVFYIL
GLFFVGLLISSEDSRLLANKAITDVKASPWVLIGLYARLKGLDHFMNAIILVSVLSIGVSSVYGGSRTLTALAQQ
GYAPKLFTYIDRSGRPLPAVILIILTGPLAYVNLNASGPVVFEWLQALSGLAVMFSWAAICLAHIRFRKAWAYNG
HSLDEIPFQALLGVWGSWISLTLCFLVLAAQFYTAIKPVGKPGFNTVEGFFKNWLAFPVVIAFWICGSVWKRSGW
LRIDQIDVDTGRRELDWEEVRAYRDHVQRLPAWRRVLHKLF*
Coding >Ophcf2|05307
ATGACGGATCCGGAGAAGAGCGGCGTGGGCGTGGAAGAGTCCAAGGTGCTCGAAGCCAGCCCTGCGTTCGCGGCC
ACGTTCCAGGATGAGGACAAGTGGACGAGATGCGGCCTCAGCCTCAAGTCGTTCCAGAAGCGACATTATGGCCGC
GGCGTGGTCGAGCTGGATCGGTCCATCAAGACGCGTCATCTGCATATGATTGCCATCGGAGGTTCCATAGGCGCT
GGTTTCTTCGTCGGCTCCGGCAGTGCTCTCAGCAAAGGCGGTCCTGCTTCTCTGTTGCTGTGCTTCGCCATTGTC
GGCTTCATGGTCTTCAATATCGTATTCGCTCTCGGTGAACTCGCCATCATGTATCCCATCTCGGGCGGCTTCTAC
ACCTACGCGACCCGTTTCGTCGACCCTTCATTCGGCTTCGCCGTCGGTTGGAACTACCTCTTCCTATGGCTCAGC
GTGCTGCCGCTTGAACTGACCGTCTGCTCGCTCGTGATACAATACTGGGACGAAAAGACGAGCGTGGCGGTCTGG
ATAACCATCTTCCTCGTTGCCGTCATCGTCATCAACATATTTGGCGGCCTAGGCTTCGCCGAGGAGGAGTTTGTC
GCCTCTATGATCAAGTTGACGGCCATTACCTCGTTCCTCATCATCGCTCTCGTCCTGGTACTCGGAGGAGGGCCT
CGAGATGGCCGCTATAACGAGTACTGGGGCGCGCGCTATTGGTTCGAGCCCGGCGCGTTTCGCAACGGCCTTCGA
GGCTTCTGCTCCGTCTTCGTCACCGCTGCCTTTTCGCTGACCGGCACGGAGCTCGTTGGCCTCGCGGCGGCTGAG
ACGCGGAATCCGGTCAAATCGTTGCCTGGCGCCGTGAAGCGCGTCTTCTGGCGCATCGTCGTCTTCTACATCCTC
GGTCTGTTCTTCGTCGGATTGCTTATTTCCTCAGAAGACTCTCGGCTCCTGGCCAACAAGGCTATTACCGATGTC
AAGGCCTCACCTTGGGTCCTGATCGGACTCTATGCCCGTCTTAAGGGTCTCGACCACTTTATGAACGCCATCATT
CTCGTCTCCGTCCTGTCCATCGGCGTCTCCAGCGTGTACGGCGGGTCCCGGACACTCACGGCGCTCGCTCAGCAA
GGTTACGCTCCGAAGCTGTTCACCTACATTGATCGATCAGGACGACCGCTGCCCGCCGTCATACTCATCATCTTG
ACAGGGCCTCTCGCCTATGTCAACCTCAACGCCTCGGGCCCCGTCGTCTTTGAATGGTTACAGGCTCTCTCCGGG
CTGGCCGTCATGTTCTCTTGGGCCGCTATCTGCCTGGCTCATATCCGCTTCCGCAAAGCCTGGGCCTATAATGGG
CACTCGCTCGACGAGATTCCCTTCCAGGCGCTTCTCGGCGTCTGGGGTTCCTGGATTTCTCTCACCCTGTGCTTC
TTGGTCCTCGCCGCTCAATTCTACACGGCCATCAAGCCCGTCGGGAAGCCGGGCTTCAACACGGTCGAGGGCTTC
TTCAAGAACTGGCTCGCCTTTCCCGTCGTCATCGCTTTCTGGATTTGCGGCTCCGTTTGGAAACGATCCGGCTGG
CTCCGCATCGATCAGATCGACGTCGACACCGGCCGCCGCGAGCTGGACTGGGAGGAGGTCAGGGCGTACCGCGAT
CATGTCCAACGGCTACCGGCATGGCGTCGGGTTTTGCACAAGCTCTTTTGA
Transcript >Ophcf2|05307
ATGACGGATCCGGAGAAGAGCGGCGTGGGCGTGGAAGAGTCCAAGGTGCTCGAAGCCAGCCCTGCGTTCGCGGCC
ACGTTCCAGGATGAGGACAAGTGGACGAGATGCGGCCTCAGCCTCAAGTCGTTCCAGAAGCGACATTATGGCCGC
GGCGTGGTCGAGCTGGATCGGTCCATCAAGACGCGTCATCTGCATATGATTGCCATCGGAGGTTCCATAGGCGCT
GGTTTCTTCGTCGGCTCCGGCAGTGCTCTCAGCAAAGGCGGTCCTGCTTCTCTGTTGCTGTGCTTCGCCATTGTC
GGCTTCATGGTCTTCAATATCGTATTCGCTCTCGGTGAACTCGCCATCATGTATCCCATCTCGGGCGGCTTCTAC
ACCTACGCGACCCGTTTCGTCGACCCTTCATTCGGCTTCGCCGTCGGTTGGAACTACCTCTTCCTATGGCTCAGC
GTGCTGCCGCTTGAACTGACCGTCTGCTCGCTCGTGATACAATACTGGGACGAAAAGACGAGCGTGGCGGTCTGG
ATAACCATCTTCCTCGTTGCCGTCATCGTCATCAACATATTTGGCGGCCTAGGCTTCGCCGAGGAGGAGTTTGTC
GCCTCTATGATCAAGTTGACGGCCATTACCTCGTTCCTCATCATCGCTCTCGTCCTGGTACTCGGAGGAGGGCCT
CGAGATGGCCGCTATAACGAGTACTGGGGCGCGCGCTATTGGTTCGAGCCCGGCGCGTTTCGCAACGGCCTTCGA
GGCTTCTGCTCCGTCTTCGTCACCGCTGCCTTTTCGCTGACCGGCACGGAGCTCGTTGGCCTCGCGGCGGCTGAG
ACGCGGAATCCGGTCAAATCGTTGCCTGGCGCCGTGAAGCGCGTCTTCTGGCGCATCGTCGTCTTCTACATCCTC
GGTCTGTTCTTCGTCGGATTGCTTATTTCCTCAGAAGACTCTCGGCTCCTGGCCAACAAGGCTATTACCGATGTC
AAGGCCTCACCTTGGGTCCTGATCGGACTCTATGCCCGTCTTAAGGGTCTCGACCACTTTATGAACGCCATCATT
CTCGTCTCCGTCCTGTCCATCGGCGTCTCCAGCGTGTACGGCGGGTCCCGGACACTCACGGCGCTCGCTCAGCAA
GGTTACGCTCCGAAGCTGTTCACCTACATTGATCGATCAGGACGACCGCTGCCCGCCGTCATACTCATCATCTTG
ACAGGGCCTCTCGCCTATGTCAACCTCAACGCCTCGGGCCCCGTCGTCTTTGAATGGTTACAGGCTCTCTCCGGG
CTGGCCGTCATGTTCTCTTGGGCCGCTATCTGCCTGGCTCATATCCGCTTCCGCAAAGCCTGGGCCTATAATGGG
CACTCGCTCGACGAGATTCCCTTCCAGGCGCTTCTCGGCGTCTGGGGTTCCTGGATTTCTCTCACCCTGTGCTTC
TTGGTCCTCGCCGCTCAATTCTACACGGCCATCAAGCCCGTCGGGAAGCCGGGCTTCAACACGGTCGAGGGCTTC
TTCAAGAACTGGCTCGCCTTTCCCGTCGTCATCGCTTTCTGGATTTGCGGCTCCGTTTGGAAACGATCCGGCTGG
CTCCGCATCGATCAGATCGACGTCGACACCGGCCGCCGCGAGCTGGACTGGGAGGAGGTCAGGGCGTACCGCGAT
CATGTCCAACGGCTACCGGCATGGCGTCGGGTTTTGCACAAGCTCTTTTGA
Gene >Ophcf2|05307
ATGACGGATCCGGAGAAGAGCGGCGTGGGCGTGGAAGAGTCCAAGGTGCTCGAAGCCAGCCCTGCGTTCGCGGCC
ACGTTCCAGGATGAGGACAAGTGGACGAGATGCGGCCTCAGCCTCAAGTCGTTCCAGAAGCGACATTATGGCCGC
GGCGTGGTCGAGCTGGATCGGTCCATCAAGACGCGTCATCTGCATATGATTGCCATCGGAGGTTCCATAGGCGCT
GGTTTCTTCGTCGGCTCCGGCAGTGCTCTCAGCAAAGGCGTGAGTTAGGACTGTATGTTGTATTGGTGAAAAGAA
GGCTGGCTGACGGCGTTGTCAAAGGGTCCTGCTTCTCTGTTGCTGTGCTTCGCCATTGTCGGCTTCATGGTCTTC
AATATCGGTATGAAAGAAGCCAGTCGATCGTTTGGACGCCCTTGACTCACGCTTTCCAGTATTCGCTCTCGGTGA
ACTCGCCATCATGTATCCCATCTCGGGCGGCTTCTACACCTACGCGACCCGTTTCGTCGACCCTTCATTCGGCTT
CGCCGTCGGTTGGAACTACCTCTTCCTATGGCTCAGCGTGCTGCCGCTTGAACTGACCGTCTGCTCGCTCGTGAT
ACAATACTGGGACGAAAAGACGAGCGTGGCGGTCTGGATAACCATCTTCCTCGTTGCCGTCATCGTCATCAACAT
ATTTGGCGGCCTAGGCTTCGCCGAGGAGGAGTTTGTCGCCTCTATGATCAAGTTGACGGCCATTACCTCGTTCCT
CATCATCGCTCTCGTCCTGGTACTCGGAGGAGGGCCTCGAGATGGCCGCTATAACGAGTACTGGGGCGCGCGCTA
TTGGTTCGAGCCCGGCGCGTTTCGCAACGGCCTTCGAGGCTTCTGCTCCGTCTTCGTCACCGCTGCCTTTTCGCT
GACCGGCACGGAGCTCGTTGGCCTCGCGGCGGCTGAGACGCGGAATCCGGTCAAATCGTTGCCTGGCGCCGTGAA
GCGCGTCTTCTGGCGCATCGTCGTCTTCTACATCCTCGGTCTGTTCTTCGTCGGATTGCTTATTTCCTCAGAAGA
CTCTCGGCTCCTGGCCAACAAGGCTATTACCGATGTCAAGGCCTCACCTTGGGTCCTGATCGGACTCTATGCCCG
TCTTAAGGGTCTCGACCACTTTATGAACGCCATCATTCTCGTCTCCGTCCTGTCCATCGGCGTCTCCAGCGTGTA
CGGCGGGTCCCGGACACTCACGGCGCTCGCTCAGCAAGGTTACGCTCCGAAGCTGTTCACCTACATTGATCGATC
AGGACGACCGCTGCCCGCCGTCATACTCATCATCTTGACAGGGCCTCTCGCCTATGTCAACCTCAACGCCTCGGG
CCCCGTCGTCTTTGAATGGTTACAGGCTCTCTCCGGGCTGGCCGTCATGTTCTCTTGGGCCGCTATCTGCCTGGC
TCATATCCGCTTCCGCAAAGCCTGGGCCTATAATGGGCACTCGCTCGACGAGATTCCCTTCCAGGCGCTTCTCGG
CGTCTGGGGTTCCTGGATTTCTCTCACCCTGTGCTTCTTGGTCCTCGCCGCTCAAGTAGGTCGTTAAAAATGTCT
TTTAGAGAGAGGAACAGTCATTGATGAAACGTCTGCAGTTCTACACGGCCATCAAGCCCGTCGGGAAGCCGGGCT
TCAACACGGTCGAGGGCTTCTTCAAGAACTGGCTCGCCTTTCCCGTCGTCATCGCTTTCTGGATTTGCGGCTCCG
TTTGGAAACGATCCGGCTGGCTCCGCATCGATCAGATCGACGTCGACACCGGCCGCCGCGAGCTGGACTGGGAGG
AGGTCAGGGCGTACCGCGATCATGTCCAACGGCTACCGGCATGGCGTCGGGTTTTGCACAAGCTCTTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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