Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05281
Gene name
Locationscaffold_05:3089696..3091458
Strand-
Gene length (bp)1762
Transcript length (bp)1236
Coding sequence length (bp)1236
Protein length (aa) 412

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00682 HMGL-like HMGL-like 9.7E-77 36 295

GO

GO Term Description Terminal node
GO:0003824 catalytic activity Yes
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05281
MCSEPASNGSVQPPRTAPRSNPYQSVGDFLSNTNRFQIIESTLREGEQFANAFFNTETKIKIATALSDFGVEYIE
LTSPAASEQSRLDCEAIAKLGLKAKILTHTRCTLEDAKLACDCGVHGVDVVIGTSSFLREHSHGKDMVAITKQAL
EVIEYIKSRGCEVRFSSEDSFRSDLVDLLQLYRAVDKAGVNRVGVADTVGCATPRQVYDLVRTLRGVVSTDIETH
FHNDTGCAIANAHAALEAGATHIDTSVLGIGERNGITPLGGLMARMIVGSRDYVTSRYKLHKLKEIEDLVAESVQ
VNIPFNSPITGTCAFTHKAGIHAKAILNEPSTYEIIDPADFGMSRYIHVTSRLTGWNAIRSRVEQLGLRMTDEQV
KLLTSKIKAMADIRPLAIDDTDSIIRSFHLELQEDK*
Coding >Ophcf2|05281
ATGTGCTCCGAACCAGCGTCAAACGGCTCCGTCCAGCCGCCTCGAACCGCTCCCCGGTCTAACCCGTATCAGTCT
GTTGGCGACTTTCTCTCCAACACCAACAGATTCCAGATCATCGAGAGCACGCTGCGAGAAGGCGAGCAGTTTGCC
AATGCCTTTTTCAACACTGAAACCAAGATCAAAATAGCCACGGCCCTATCCGACTTTGGCGTCGAATACATCGAA
CTCACGTCCCCTGCTGCGTCGGAGCAATCCCGTCTCGACTGCGAGGCCATCGCCAAGCTCGGTCTCAAGGCCAAG
ATCCTCACCCATACCCGATGCACGCTCGAAGACGCCAAGCTGGCCTGCGACTGTGGCGTCCACGGAGTCGATGTT
GTCATTGGGACCTCGAGCTTCCTCAGAGAACATTCTCACGGCAAGGACATGGTGGCCATTACCAAGCAGGCCCTC
GAGGTCATTGAGTACATCAAGAGCCGGGGCTGCGAAGTCCGCTTCTCGTCCGAAGACTCGTTCCGCTCCGATCTC
GTCGACCTGCTGCAACTGTACCGCGCCGTCGACAAGGCTGGCGTCAATCGCGTCGGTGTTGCGGACACGGTCGGA
TGTGCCACGCCTCGTCAGGTCTACGATCTCGTCAGGACACTTCGAGGCGTCGTCTCGACCGATATCGAGACTCAT
TTCCACAACGACACCGGATGTGCCATCGCCAACGCCCACGCTGCGCTGGAAGCCGGCGCGACTCATATTGACACG
TCGGTACTTGGCATAGGCGAGAGGAACGGCATCACGCCCTTGGGTGGTCTCATGGCCCGCATGATTGTCGGCAGT
CGTGACTACGTCACCTCGAGATATAAGCTTCACAAGCTCAAGGAGATTGAAGACCTAGTGGCCGAGTCGGTGCAG
GTCAACATTCCCTTCAACTCGCCCATTACCGGAACCTGTGCCTTTACCCACAAGGCCGGCATACACGCCAAGGCG
ATTCTTAACGAGCCGTCGACGTACGAAATCATCGATCCGGCGGATTTCGGCATGTCACGATACATCCACGTCACG
TCGAGGCTCACGGGCTGGAACGCCATCCGGAGCCGTGTGGAGCAGCTCGGTCTCCGCATGACGGATGAGCAGGTG
AAGCTGCTGACATCCAAGATCAAGGCCATGGCCGACATCCGGCCTTTGGCGATTGACGATACGGATTCCATCATT
CGGTCGTTCCATCTCGAGCTGCAGGAGGACAAGTAG
Transcript >Ophcf2|05281
ATGTGCTCCGAACCAGCGTCAAACGGCTCCGTCCAGCCGCCTCGAACCGCTCCCCGGTCTAACCCGTATCAGTCT
GTTGGCGACTTTCTCTCCAACACCAACAGATTCCAGATCATCGAGAGCACGCTGCGAGAAGGCGAGCAGTTTGCC
AATGCCTTTTTCAACACTGAAACCAAGATCAAAATAGCCACGGCCCTATCCGACTTTGGCGTCGAATACATCGAA
CTCACGTCCCCTGCTGCGTCGGAGCAATCCCGTCTCGACTGCGAGGCCATCGCCAAGCTCGGTCTCAAGGCCAAG
ATCCTCACCCATACCCGATGCACGCTCGAAGACGCCAAGCTGGCCTGCGACTGTGGCGTCCACGGAGTCGATGTT
GTCATTGGGACCTCGAGCTTCCTCAGAGAACATTCTCACGGCAAGGACATGGTGGCCATTACCAAGCAGGCCCTC
GAGGTCATTGAGTACATCAAGAGCCGGGGCTGCGAAGTCCGCTTCTCGTCCGAAGACTCGTTCCGCTCCGATCTC
GTCGACCTGCTGCAACTGTACCGCGCCGTCGACAAGGCTGGCGTCAATCGCGTCGGTGTTGCGGACACGGTCGGA
TGTGCCACGCCTCGTCAGGTCTACGATCTCGTCAGGACACTTCGAGGCGTCGTCTCGACCGATATCGAGACTCAT
TTCCACAACGACACCGGATGTGCCATCGCCAACGCCCACGCTGCGCTGGAAGCCGGCGCGACTCATATTGACACG
TCGGTACTTGGCATAGGCGAGAGGAACGGCATCACGCCCTTGGGTGGTCTCATGGCCCGCATGATTGTCGGCAGT
CGTGACTACGTCACCTCGAGATATAAGCTTCACAAGCTCAAGGAGATTGAAGACCTAGTGGCCGAGTCGGTGCAG
GTCAACATTCCCTTCAACTCGCCCATTACCGGAACCTGTGCCTTTACCCACAAGGCCGGCATACACGCCAAGGCG
ATTCTTAACGAGCCGTCGACGTACGAAATCATCGATCCGGCGGATTTCGGCATGTCACGATACATCCACGTCACG
TCGAGGCTCACGGGCTGGAACGCCATCCGGAGCCGTGTGGAGCAGCTCGGTCTCCGCATGACGGATGAGCAGGTG
AAGCTGCTGACATCCAAGATCAAGGCCATGGCCGACATCCGGCCTTTGGCGATTGACGATACGGATTCCATCATT
CGGTCGTTCCATCTCGAGCTGCAGGAGGACAAGTAG
Gene >Ophcf2|05281
ATGTGCTCCGAACCAGCGTCAAACGGCTCCGTCCAGCCGCCTCGAACCGCTCCCCGGTCTAACCCGTATCAGTCT
GTTGGCGACTTTCTCTCCAACACCAACAGATTCCAGATCATCGAGAGCACGCTGCGAGAAGGCGAGCAGTTTGCC
AATGCCTTTTTCAACACTGGTAAGAAAGCCTGAGATTTGGTTCCCTAATTGGTCTTTTTTTTTTTTTTCTAACGT
CTCGCTCGTCTTCTAGAAACCAAGATCAAAATGTGCCACATTCCCACATTTCCTTTCCCTTTCTTCGACGGCCTC
GACTAATCCGCCGCCCGCAGAGCCACGGCCCTATCCGACTTTGGCGTCGAATACATCGAACTCACGTCCCCTGCT
GCGTCGGAGCAATCCCGTCTCGACTGCGAGGCCATCGCCAAGCTCGGTCTCAAGGCCAAGATCCTCACCCATACC
CGATGCACGCTCGAAGACGCCAAGCTGGCCTGCGACTGTGGCGTCCACGGAGTCGATGTTGTCATTGGGACCTCG
AGGTGGGCTGCTTCCGCTGCATGGATGATGTAAAAGGCTGACTTGGCCCCAGCTTCCTCAGAGAACATTCTCACG
GCAAGGACATGGTGGCCATTACCAAGCAGGCCCTCGAGGTCATTGAGTACATCAAGAGGTAGGGCTTTCTCGCTT
CTCGTGCCGCTGGATCCTGACACATCGTCTAGCCGGGGCTGCGAAGTCCGCTTCTCGTCCGAAGACTCGTTCCGC
TCCGATCTCGTCGACCTGCTGCAACTGTACCGCGCCGTCGACAAGGCTGGCGTCAATCGCGTCGGTGTTGCGGAC
ACGGTCGGATGTGCCACGCCTCGTCAGGTCTACGATCTCGTCAGGACACTTCGAGGCGTCGTCTCGACCGATATC
GAGACTCATTTGTGAGAGCGAATTCCGTCTTCGTCTTGACGCCTCTAACGGGAGGCAGCCACAACGACACCGGAT
GTGCCATCGCCAACGCCCACGCTGCGCTGGAAGCCGGCGCGACTCATATTGACACGTCGGTACTTGGCATAGGTG
AGACGGTCTCTGTCCCCTTCTTCGCTCCAAGCTAATACTGTTCTAGGCGAGAGGAACGGCATCACGGTGAGCATG
ACGGGTATCGCGTACTGGCGCTTGTTCTGACTCATTCAGCCCTTGGGTGGTCTCATGGCCCGCATGATTGTCGGC
AGTCGTGACTACGTCACCTCGAGATATAAGCTTCACAAGCTCAAGGAGATTGAAGACCTAGTGGCCGAGTCGGTG
CAGGTCAACATTCCCTTCAACTCGCCCATTACCGGTGAGTCGGAAGCGGGCCGGTGGATTGAGTCTGTTGCCAAC
GCACGATAGGAACCTGTGCCTTTACCCACAAGGCCGGCATACACGCCAAGGCGATTCTTAACGAGGTAGGTATTC
GAGATGGGCTGATGCGACGGCTACTGACGACAAGCAGCCGTCGACGTACGAAATCATCGATCCGGCGGATTTCGG
CATGTCACGATACATCCACGTCACGTCGAGGCTCACGGGCTGGAACGCCATCCGGAGCCGTGTGGAGCAGCTCGG
TCTCCGCATGACGGATGAGCAGGTGAAGCTGCTGTGAGTAGTCTGTCGCTTACGGCCTGACGCGGACTGACGAAA
GTTGGGTAGGACATCCAAGATCAAGGCCATGGCCGACATCCGGCCTTTGGCGATTGACGATACGGATTCCATCAT
TCGGTCGTTCCATCTCGAGCTGCAGGAGGACAAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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