Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05237
Gene name
Locationscaffold_05:2856606..2857823
Strand-
Gene length (bp)1217
Transcript length (bp)1029
Coding sequence length (bp)1029
Protein length (aa) 343

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.5

Transmembrane Domains

Domain # Start End Length
1 74 96 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05237
MGSTTRVYRSDDDDDDDNYAYTDMPLRLIMADMALLLANSWALPHILLPLRGRSGAFAELYPTAANLWSLLTQVV
LGFGQVGFFVALPWTVLLPVWAAGLVVGGEHWTKSNLNRLALTFGRPIMGIHNRTSGILFDIVECLVQRNLTYAT
GDVRLTYRLLRSVLYDPTKTRVVFILHSQGGIEGGLVIDWLLQDTPQDLLSKLEVYTFGNAANHFNNPRRRASWR
AAQDRAIGHMEHYAHSTDFVARCGVLSRRRGRFHGRLFNRSTGRGGHLLNQHYLDGMFPLRRDEETGEFVGAEEG
NGFMDEMVDGGDGRMVRIGELSRLWAYRNGQCPAERKNGVCD*
Coding >Ophcf2|05237
ATGGGCTCGACCACGCGCGTCTACCGCTCCGACGACGACGACGACGACGACAACTACGCCTACACGGACATGCCG
CTGCGGCTCATCATGGCCGACATGGCCCTCCTGCTCGCCAACTCCTGGGCGTTACCGCACATCCTCCTCCCGCTA
CGGGGCCGGTCGGGCGCCTTCGCGGAGCTGTACCCCACAGCGGCGAACCTGTGGTCTCTGCTGACGCAGGTGGTG
CTCGGGTTCGGGCAGGTCGGCTTCTTCGTGGCTCTGCCGTGGACGGTGCTGCTGCCTGTATGGGCGGCCGGGTTG
GTGGTTGGAGGTGAGCATTGGACGAAGAGCAACCTCAATAGGTTGGCCCTCACCTTTGGACGACCTATTATGGGG
ATTCATAACCGGACGTCGGGCATCCTGTTTGACATCGTCGAGTGTCTGGTTCAACGCAACTTGACGTATGCCACG
GGTGACGTCCGGCTCACCTACCGGCTTCTACGCTCCGTGCTCTACGACCCGACCAAGACGCGCGTCGTCTTCATC
CTCCACTCGCAGGGCGGCATCGAAGGCGGCCTCGTCATCGACTGGCTCCTACAAGACACGCCGCAAGACCTCCTC
TCCAAGCTAGAGGTCTACACCTTTGGCAACGCGGCCAACCACTTCAACAACCCCCGCCGAAGGGCATCCTGGCGC
GCCGCACAAGATCGCGCAATCGGCCACATGGAGCACTACGCTCACAGCACAGACTTCGTCGCCAGATGCGGCGTC
CTGAGCCGACGACGGGGCCGCTTCCACGGGAGGTTGTTCAACCGCTCGACCGGACGGGGCGGACACCTCCTCAAT
CAGCATTACCTGGATGGCATGTTCCCGCTGCGGCGCGACGAGGAGACGGGCGAGTTTGTGGGGGCTGAGGAGGGG
AATGGGTTCATGGATGAGATGGTTGATGGGGGGGATGGGCGGATGGTGAGGATTGGCGAGTTGAGTCGCTTGTGG
GCGTATAGGAATGGGCAGTGTCCGGCGGAGAGGAAGAATGGGGTTTGCGATTGA
Transcript >Ophcf2|05237
ATGGGCTCGACCACGCGCGTCTACCGCTCCGACGACGACGACGACGACGACAACTACGCCTACACGGACATGCCG
CTGCGGCTCATCATGGCCGACATGGCCCTCCTGCTCGCCAACTCCTGGGCGTTACCGCACATCCTCCTCCCGCTA
CGGGGCCGGTCGGGCGCCTTCGCGGAGCTGTACCCCACAGCGGCGAACCTGTGGTCTCTGCTGACGCAGGTGGTG
CTCGGGTTCGGGCAGGTCGGCTTCTTCGTGGCTCTGCCGTGGACGGTGCTGCTGCCTGTATGGGCGGCCGGGTTG
GTGGTTGGAGGTGAGCATTGGACGAAGAGCAACCTCAATAGGTTGGCCCTCACCTTTGGACGACCTATTATGGGG
ATTCATAACCGGACGTCGGGCATCCTGTTTGACATCGTCGAGTGTCTGGTTCAACGCAACTTGACGTATGCCACG
GGTGACGTCCGGCTCACCTACCGGCTTCTACGCTCCGTGCTCTACGACCCGACCAAGACGCGCGTCGTCTTCATC
CTCCACTCGCAGGGCGGCATCGAAGGCGGCCTCGTCATCGACTGGCTCCTACAAGACACGCCGCAAGACCTCCTC
TCCAAGCTAGAGGTCTACACCTTTGGCAACGCGGCCAACCACTTCAACAACCCCCGCCGAAGGGCATCCTGGCGC
GCCGCACAAGATCGCGCAATCGGCCACATGGAGCACTACGCTCACAGCACAGACTTCGTCGCCAGATGCGGCGTC
CTGAGCCGACGACGGGGCCGCTTCCACGGGAGGTTGTTCAACCGCTCGACCGGACGGGGCGGACACCTCCTCAAT
CAGCATTACCTGGATGGCATGTTCCCGCTGCGGCGCGACGAGGAGACGGGCGAGTTTGTGGGGGCTGAGGAGGGG
AATGGGTTCATGGATGAGATGGTTGATGGGGGGGATGGGCGGATGGTGAGGATTGGCGAGTTGAGTCGCTTGTGG
GCGTATAGGAATGGGCAGTGTCCGGCGGAGAGGAAGAATGGGGTTTGCGATTGA
Gene >Ophcf2|05237
ATGGGCTCGACCACGCGCGTCTACCGCTCCGACGACGACGACGACGACGACAACTACGCCTACACGGACATGCCG
CTGCGGCTCATCATGGCCGACATGGCCCTCCTGCTCGCCAACTCCTGGGCGTTACCGCACATCCTCCTCCCGCTA
CGGGGCCGGTCGGGCGCCTTCGCGGAGCTGTACCCCACAGCGGCGAACCTGTGGTCTCTGCTGACGCAGGTGGTG
CTCGGGTTCGGGCAGGTCGGCTTCTTCGTGGCTCTGCCGTGGACGGTGCTGCTGCCTGTATGGGCGGCCGGGTTG
GTGGTTGGAGGGTTTGTTGGCTTCAACTGGGTGCTTTGTCGGACGGTTAATGGGAAGGGGGTGAGGTTTGATTCT
GAGGAGAGGTTTGTGAGGGGGAGGCCGGTTAGGGAGGGGGAGCAGTGGATCTTTCTGAATGGGGTTGCGGCTGGG
TGGGTTTGATGCTTGGGTGAACGCTTGGGATTGCGGCTGATGAGTGCAGTGAGCATTGGACGAAGAGCAACCTCA
ATAGGTTGGCCCTCACCTTTGGACGACCTATTATGGGGATTCATAACCGGACGTCGGGCATCCTGTTTGACATCG
TCGAGTGTCTGGTTCAACGCAACTTGACGTATGCCACGGGTGACGTCCGGCTCACCTACCGGCTTCTACGCTCCG
TGCTCTACGACCCGACCAAGACGCGCGTCGTCTTCATCCTCCACTCGCAGGGCGGCATCGAAGGCGGCCTCGTCA
TCGACTGGCTCCTACAAGACACGCCGCAAGACCTCCTCTCCAAGCTAGAGGTCTACACCTTTGGCAACGCGGCCA
ACCACTTCAACAACCCCCGCCGAAGGGCATCCTGGCGCGCCGCACAAGATCGCGCAATCGGCCACATGGAGCACT
ACGCTCACAGCACAGACTTCGTCGCCAGATGCGGCGTCCTGAGCCGACGACGGGGCCGCTTCCACGGGAGGTTGT
TCAACCGCTCGACCGGACGGGGCGGACACCTCCTCAATCAGCATTACCTGGATGGCATGTTCCCGCTGCGGCGCG
ACGAGGAGACGGGCGAGTTTGTGGGGGCTGAGGAGGGGAATGGGTTCATGGATGAGATGGTTGATGGGGGGGATG
GGCGGATGGTGAGGATTGGCGAGTTGAGTCGCTTGTGGGCGTATAGGAATGGGCAGTGTCCGGCGGAGAGGAAGA
ATGGGGTTTGCGATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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