Protein ID | Ophcf2|05216 |
Gene name | |
Location | scaffold_05:2795077..2798379 |
Strand | - |
Gene length (bp) | 3302 |
Transcript length (bp) | 2883 |
Coding sequence length (bp) | 2883 |
Protein length (aa) | 961 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10277 | Frag1 | Frag1/DRAM/Sfk1 family | 2.3E-36 | 20 | 227 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 31 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 21 | 43 | 22 |
2 | 79 | 101 | 22 |
3 | 108 | 130 | 22 |
4 | 140 | 159 | 19 |
5 | 172 | 189 | 17 |
6 | 204 | 226 | 22 |
7 | 278 | 300 | 22 |
8 | 310 | 332 | 22 |
9 | 358 | 375 | 17 |
10 | 390 | 407 | 17 |
11 | 420 | 440 | 20 |
12 | 455 | 477 | 22 |
13 | 497 | 519 | 22 |
14 | 544 | 566 | 22 |
15 | 579 | 601 | 22 |
16 | 611 | 629 | 18 |
17 | 650 | 667 | 17 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|05216 MATTRYKDKDAGVVVSFGGQWVSWAHTVAASTAFLSALLVGIALHYHKIVQNEFYGYPDEWFPSVSAAIGDRYPE RSCFMIFIAVTSGPRFALVGLWYLLTRKQGSRLPGFVASMGVVRTLTCGGWTYVTSTDDHDWHDIFMISYIVATL PWTTGCIALSPPNPQAIKYRKYIASTFFGTLVPLIYFFIRHKVHRVAGAYTIYAFLEWSLIILDVAFDAVTALDF STFEVLVKDVKGSTKGEAASSLHSAVLEKEKQQATAGVYSGSFTWSEALDIAASVYHGFIFWSMLTSLGLLVWFF PLWHMGISGYEAFVLVSASPALLVGPIRSLVVNNVRIVHLLSLVGVAAYLVPDQANRLLTVGVGVALSTLGWVAT LHSESAHERRFESRLLGLMIGLILSSTAKFAWQTNNPVWPILHDANGGWNGTGLILGVLAALRFTRHAPLTGHLS LGGKQGGSTVLAACGIGGLFFGLHSLLSDTSTMILWGWEGYPIRGPYFSTHGWCTVAAMSAGLGAGIWRPAVAGS WTQYAAGAVGAMVLTKFSHWLGYLGGLGLAVYLMAVSVPLLSSACKKKPAVTFGLGFFIYVFMVLFHVWVVAYAF VPGGPLVRERTDWIMMTMMMLIGAGVADYKASQPRRPQPRSPQTSQHRKFHGVATLLVNILFLCAAFKRFPRADH KPYHGEDRILTAGIWTVHFSLDNDMWSSEYRMRDLIKEMELDVVGLLESDLQRIIMGNRDTTQFLAEDLGMYVDY GPGPNKHTWGAALLSKFPIVESKHHLLPSPVGELAPAIHATLDVYGELVDVFVFHSGQEEDPEDRRLQSEYLSKL MGSSPRPSILLSYLVTKPLEGNYKTYVSEQSGMHDIDWTDWDRWCEYILYKGLRRVGYARVSRSTITDTELQVGK FVVPRSAAEMTQLEARPAEERDRRVKESEVPEGWRFPALFRGVGVRDHRYHVFDEPRYFN* |
Coding | >Ophcf2|05216 ATGGCGACGACACGATATAAGGACAAGGACGCTGGCGTCGTCGTCAGCTTTGGCGGCCAGTGGGTGAGCTGGGCG CATACCGTCGCAGCTTCGACTGCCTTCTTGAGTGCCCTGTTGGTGGGCATCGCTCTACACTACCACAAAATCGTC CAAAACGAATTCTACGGCTACCCAGACGAATGGTTTCCCTCCGTCTCGGCCGCCATTGGCGATCGATATCCCGAG CGGTCATGCTTCATGATCTTTATCGCCGTCACATCTGGTCCACGCTTCGCCCTCGTCGGCTTGTGGTATCTCTTG ACGCGCAAGCAAGGGTCCAGACTCCCCGGCTTCGTGGCCTCGATGGGTGTTGTTCGTACATTGACCTGCGGCGGT TGGACTTACGTTACGTCGACCGATGACCACGACTGGCACGATATCTTCATGATCTCCTACATTGTCGCCACGCTG CCTTGGACCACCGGTTGCATCGCCTTGAGCCCCCCGAACCCGCAAGCCATCAAGTATCGCAAATACATTGCCAGC ACCTTTTTCGGAACCCTCGTCCCGCTCATCTACTTCTTCATCCGGCACAAAGTCCATCGCGTGGCTGGGGCTTAC ACCATCTACGCCTTCCTCGAGTGGTCGCTCATCATCCTCGATGTGGCCTTTGACGCCGTCACAGCTCTCGACTTT AGCACGTTTGAGGTGCTGGTGAAAGATGTCAAGGGATCGACAAAGGGTGAAGCTGCTTCTTCATTGCACTCGGCA GTGTTGGAGAAGGAAAAGCAACAAGCGACGGCGGGCGTTTACTCGGGCAGTTTCACGTGGTCCGAGGCCTTGGAC ATTGCCGCGAGTGTCTATCATGGGTTCATCTTCTGGTCAATGCTGACCAGTCTGGGCCTTCTTGTCTGGTTCTTT CCCCTCTGGCACATGGGTATATCCGGCTACGAGGCCTTCGTACTGGTCTCCGCATCGCCGGCACTCCTGGTCGGT CCCATCCGATCATTGGTGGTCAATAACGTTCGGATTGTTCACCTGCTTTCGCTCGTCGGCGTCGCCGCATATCTC GTTCCCGACCAAGCCAACCGTCTGCTGACCGTGGGAGTTGGTGTCGCCCTATCGACCTTGGGCTGGGTTGCCACA CTACACTCAGAATCCGCACACGAGAGACGGTTTGAGTCGCGGCTGCTGGGGTTGATGATCGGCTTAATCCTTTCG TCGACTGCCAAGTTTGCCTGGCAGACAAATAACCCCGTGTGGCCCATCTTGCACGACGCCAACGGAGGCTGGAAC GGAACGGGCCTCATCCTCGGTGTCCTGGCAGCGTTGCGCTTCACTCGTCACGCGCCCCTGACCGGCCATCTCTCC CTCGGGGGCAAGCAGGGGGGTTCGACCGTGCTCGCCGCCTGCGGCATCGGCGGGCTCTTCTTTGGACTTCACTCG TTGCTGTCCGACACGAGCACCATGATCCTCTGGGGCTGGGAAGGATACCCCATCCGCGGCCCTTACTTCTCCACA CACGGATGGTGCACGGTGGCGGCCATGTCGGCCGGTCTCGGGGCTGGCATCTGGAGGCCCGCAGTGGCCGGCAGC TGGACGCAATACGCAGCGGGCGCGGTGGGAGCCATGGTTCTGACCAAGTTTAGCCACTGGCTCGGGTACTTGGGC GGCCTAGGTCTGGCCGTGTACCTGATGGCCGTCTCGGTTCCCTTGCTGTCGAGCGCGTGCAAGAAGAAGCCGGCG GTGACGTTTGGGCTGGGGTTCTTCATCTACGTCTTCATGGTGCTCTTCCATGTCTGGGTCGTGGCTTATGCCTTT GTGCCCGGCGGGCCGCTCGTGCGCGAGCGTACGGACTGGATCATGATGACGATGATGATGCTCATCGGCGCCGGC GTGGCCGACTATAAGGCCTCACAGCCGCGACGTCCCCAGCCACGGAGCCCCCAGACGTCACAGCATCGCAAGTTT CACGGGGTGGCGACGCTGTTGGTCAACATTCTCTTCCTCTGTGCCGCCTTTAAACGGTTCCCCAGGGCGGACCAC AAGCCGTACCACGGCGAGGACCGCATCTTGACGGCCGGCATCTGGACGGTGCACTTCTCGCTCGACAATGACATG TGGTCGTCGGAATATCGGATGCGCGACCTGATAAAGGAGATGGAGCTGGACGTGGTTGGCCTTCTCGAGTCGGAT CTGCAGCGCATCATCATGGGCAACCGTGACACGACGCAGTTCCTGGCCGAGGATCTCGGCATGTACGTCGACTAC GGGCCCGGGCCCAACAAGCACACTTGGGGCGCGGCGCTGCTGTCCAAGTTCCCGATCGTCGAGTCCAAGCACCAC CTGCTGCCGAGCCCGGTAGGGGAGCTGGCGCCGGCGATACACGCGACGCTGGACGTCTACGGCGAGCTGGTCGAC GTCTTCGTCTTCCACTCAGGCCAGGAGGAGGATCCGGAGGACCGGAGGCTGCAGAGCGAGTATCTGAGCAAGCTG ATGGGCTCGAGCCCGAGGCCGTCGATCCTACTGAGCTACCTGGTGACGAAGCCGCTCGAGGGCAATTACAAGACG TACGTCAGCGAACAGTCGGGCATGCACGATATCGACTGGACCGACTGGGATCGATGGTGCGAGTACATCCTGTAC AAGGGTCTCCGGCGTGTGGGCTATGCTCGTGTCAGCCGCAGTACCATAACCGACACGGAGCTGCAGGTGGGCAAG TTTGTCGTCCCCCGCTCGGCCGCGGAGATGACGCAGCTGGAGGCGCGGCCAGCCGAGGAACGGGACCGGCGAGTG AAGGAGTCGGAGGTACCGGAAGGGTGGAGGTTCCCGGCGCTGTTCCGGGGAGTCGGCGTGCGGGATCACCGGTAT CATGTCTTTGATGAGCCGAGGTATTTCAACTAG |
Transcript | >Ophcf2|05216 ATGGCGACGACACGATATAAGGACAAGGACGCTGGCGTCGTCGTCAGCTTTGGCGGCCAGTGGGTGAGCTGGGCG CATACCGTCGCAGCTTCGACTGCCTTCTTGAGTGCCCTGTTGGTGGGCATCGCTCTACACTACCACAAAATCGTC CAAAACGAATTCTACGGCTACCCAGACGAATGGTTTCCCTCCGTCTCGGCCGCCATTGGCGATCGATATCCCGAG CGGTCATGCTTCATGATCTTTATCGCCGTCACATCTGGTCCACGCTTCGCCCTCGTCGGCTTGTGGTATCTCTTG ACGCGCAAGCAAGGGTCCAGACTCCCCGGCTTCGTGGCCTCGATGGGTGTTGTTCGTACATTGACCTGCGGCGGT TGGACTTACGTTACGTCGACCGATGACCACGACTGGCACGATATCTTCATGATCTCCTACATTGTCGCCACGCTG CCTTGGACCACCGGTTGCATCGCCTTGAGCCCCCCGAACCCGCAAGCCATCAAGTATCGCAAATACATTGCCAGC ACCTTTTTCGGAACCCTCGTCCCGCTCATCTACTTCTTCATCCGGCACAAAGTCCATCGCGTGGCTGGGGCTTAC ACCATCTACGCCTTCCTCGAGTGGTCGCTCATCATCCTCGATGTGGCCTTTGACGCCGTCACAGCTCTCGACTTT AGCACGTTTGAGGTGCTGGTGAAAGATGTCAAGGGATCGACAAAGGGTGAAGCTGCTTCTTCATTGCACTCGGCA GTGTTGGAGAAGGAAAAGCAACAAGCGACGGCGGGCGTTTACTCGGGCAGTTTCACGTGGTCCGAGGCCTTGGAC ATTGCCGCGAGTGTCTATCATGGGTTCATCTTCTGGTCAATGCTGACCAGTCTGGGCCTTCTTGTCTGGTTCTTT CCCCTCTGGCACATGGGTATATCCGGCTACGAGGCCTTCGTACTGGTCTCCGCATCGCCGGCACTCCTGGTCGGT CCCATCCGATCATTGGTGGTCAATAACGTTCGGATTGTTCACCTGCTTTCGCTCGTCGGCGTCGCCGCATATCTC GTTCCCGACCAAGCCAACCGTCTGCTGACCGTGGGAGTTGGTGTCGCCCTATCGACCTTGGGCTGGGTTGCCACA CTACACTCAGAATCCGCACACGAGAGACGGTTTGAGTCGCGGCTGCTGGGGTTGATGATCGGCTTAATCCTTTCG TCGACTGCCAAGTTTGCCTGGCAGACAAATAACCCCGTGTGGCCCATCTTGCACGACGCCAACGGAGGCTGGAAC GGAACGGGCCTCATCCTCGGTGTCCTGGCAGCGTTGCGCTTCACTCGTCACGCGCCCCTGACCGGCCATCTCTCC CTCGGGGGCAAGCAGGGGGGTTCGACCGTGCTCGCCGCCTGCGGCATCGGCGGGCTCTTCTTTGGACTTCACTCG TTGCTGTCCGACACGAGCACCATGATCCTCTGGGGCTGGGAAGGATACCCCATCCGCGGCCCTTACTTCTCCACA CACGGATGGTGCACGGTGGCGGCCATGTCGGCCGGTCTCGGGGCTGGCATCTGGAGGCCCGCAGTGGCCGGCAGC TGGACGCAATACGCAGCGGGCGCGGTGGGAGCCATGGTTCTGACCAAGTTTAGCCACTGGCTCGGGTACTTGGGC GGCCTAGGTCTGGCCGTGTACCTGATGGCCGTCTCGGTTCCCTTGCTGTCGAGCGCGTGCAAGAAGAAGCCGGCG GTGACGTTTGGGCTGGGGTTCTTCATCTACGTCTTCATGGTGCTCTTCCATGTCTGGGTCGTGGCTTATGCCTTT GTGCCCGGCGGGCCGCTCGTGCGCGAGCGTACGGACTGGATCATGATGACGATGATGATGCTCATCGGCGCCGGC GTGGCCGACTATAAGGCCTCACAGCCGCGACGTCCCCAGCCACGGAGCCCCCAGACGTCACAGCATCGCAAGTTT CACGGGGTGGCGACGCTGTTGGTCAACATTCTCTTCCTCTGTGCCGCCTTTAAACGGTTCCCCAGGGCGGACCAC AAGCCGTACCACGGCGAGGACCGCATCTTGACGGCCGGCATCTGGACGGTGCACTTCTCGCTCGACAATGACATG TGGTCGTCGGAATATCGGATGCGCGACCTGATAAAGGAGATGGAGCTGGACGTGGTTGGCCTTCTCGAGTCGGAT CTGCAGCGCATCATCATGGGCAACCGTGACACGACGCAGTTCCTGGCCGAGGATCTCGGCATGTACGTCGACTAC GGGCCCGGGCCCAACAAGCACACTTGGGGCGCGGCGCTGCTGTCCAAGTTCCCGATCGTCGAGTCCAAGCACCAC CTGCTGCCGAGCCCGGTAGGGGAGCTGGCGCCGGCGATACACGCGACGCTGGACGTCTACGGCGAGCTGGTCGAC GTCTTCGTCTTCCACTCAGGCCAGGAGGAGGATCCGGAGGACCGGAGGCTGCAGAGCGAGTATCTGAGCAAGCTG ATGGGCTCGAGCCCGAGGCCGTCGATCCTACTGAGCTACCTGGTGACGAAGCCGCTCGAGGGCAATTACAAGACG TACGTCAGCGAACAGTCGGGCATGCACGATATCGACTGGACCGACTGGGATCGATGGTGCGAGTACATCCTGTAC AAGGGTCTCCGGCGTGTGGGCTATGCTCGTGTCAGCCGCAGTACCATAACCGACACGGAGCTGCAGGTGGGCAAG TTTGTCGTCCCCCGCTCGGCCGCGGAGATGACGCAGCTGGAGGCGCGGCCAGCCGAGGAACGGGACCGGCGAGTG AAGGAGTCGGAGGTACCGGAAGGGTGGAGGTTCCCGGCGCTGTTCCGGGGAGTCGGCGTGCGGGATCACCGGTAT CATGTCTTTGATGAGCCGAGGTATTTCAACTAG |
Gene | >Ophcf2|05216 ATGGCGACGACACGATATAAGGACAAGGACGCTGGCGTCGTCGTCAGCTTTGGCGGCCAGTGGGTGAGCTGGGCG CATACCGTCGCAGCTTCGAGTGAGTCCTGGTCGCCGTATGCGACGAGTTTGATCCTGATCGATTGTGTTCAGCTG CCTTCTTGAGTGCCCTGTTGGTGGGCATCGCTCTACACTACCACAAAATCGTCCAAAACGAATTCTACGGCTACC CAGACGAATGGTTTCCCTCCGTCTCGGCCGCCATTGGCGATCGATATCCCGAGCGGTCATGCTTCATGATCTTTA TCGCCGTCACATCTGGTACGCTCTCTCGTCTACCTACACACCCGCTGCCGGGTCTGACCCGTCCCAGGTCCACGC TTCGCCCTCGTCGGCTTGTGGTATCTCTTGACGCGCAAGCAAGGGTCCAGACTCCCCGGCTTCGTGGCCTCGATG GGTGTTGTTCGTACATTGACCTGCGGCGGTTGGACTTACGTTACGTCGACCGATGACCACGACTGGCACGATATC TTCATGATCTCCTACATTGTCGCCACGCTGCCTTGGACCACCGGTTGCATCGCCTTGAGCCCCCCGAACCCGCAA GCCATCAAGTATCGCAAATACATTGCCAGCACCTTTTTCGGAACCCTCGTCCCGCTCATCTACTTCTTCATCCGG CACAAAGTCCATCGCGTGGCTGGGGGTATGTCGCGTCTCTCAGACAGTGGTCAACGCAACACTGACAAGCATAGC TTACACCATCTACGCCTTCCTCGAGTGGTCGCTCATCATCCTCGATGTGGCCTTTGACGCCGTCACAGCTCTCGA CTTTAGCACGTTTGAGGTGCTGGTGAAAGATGTCAAGGGATCGACAAAGGGGTACGTCCAATGGCTACCGAGATA GCGCTCGCTTCTTGTACAGTCACCCCCAATACAATGTTTCCCCGCCCATCGTATCTAAAGCGCCCCTCTCTCTGC AGTGAAGCTGCTTCTTCATTGCACTCGGCAGTGTTGGAGAAGGAGTGAGTTCGACCGCGCGCCGAGGGATGACGC ACCACTGACGAGACCCTTAGAAAGCAACAAGCGACGGCGGGCGTTTACTCGGGCAGTTTCACGTGGTCCGAGGCC TTGGACATTGCCGCGAGTGTCTATCATGGGGTAAGGCAGAGCTCTCCGCTCTCACGGCAGGAGTCTGTCTGGTTA CTGACTCTAGACAGTTCATCTTCTGGTCAATGCTGACCAGTCTGGGCCTTCTTGTCTGGTGTGAGTTTTTCCGAC GTCTATACTTTCTCTGCCCAGGCTTATGAGTTTCCCAAGTCTTTCCCCTCTGGCACATGGGTATATCCGGCTACG AGGCCTTCGTACTGGTCTCCGCATCGCCGGCACTCCTGGTCGGTCCCATCCGATCATTGGTGGTCAATAACGTTC GGATTGTTCACCTGCTTTCGCTCGTCGGCGTCGCCGCATATCTCGTTCCCGACCAAGCCAACCGTCTGCTGACCG TGGGAGTTGGTGTCGCCCTATCGACCTTGGGCTGGGTTGCCACACTACACTCAGAATCCGCACACGAGAGACGGT TTGAGTCGCGGCTGCTGGGGTTGATGATCGGCTTAATCCTTTCGTCGACTGCCAAGTTTGCCTGGCAGACAAATA ACCCCGTGTGGCCCATCTTGCACGACGCCAACGGAGGCTGGAACGGAACGGGCCTCATCCTCGGTGTCCTGGCAG CGTTGCGCTTCACTCGTCACGCGCCCCTGACCGGCCATCTCTCCCTCGGGGGCAAGCAGGGGGGTTCGACCGTGC TCGCCGCCTGCGGCATCGGCGGGCTCTTCTTTGGACTTCACTCGTTGCTGTCCGACACGAGCACCATGATCCTCT GGGGCTGGGAAGGATACCCCATCCGCGGCCCTTACTTCTCCACACACGGATGGTGCACGGTGGCGGCCATGTCGG CCGGTCTCGGGGCTGGCATCTGGAGGCCCGCAGTGGCCGGCAGCTGGACGCAATACGCAGCGGGCGCGGTGGGAG CCATGGTTCTGACCAAGTTTAGCCACTGGCTCGGGTACTTGGGCGGCCTAGGTCTGGCCGTGTACCTGATGGCCG TCTCGGTTCCCTTGCTGTCGAGCGCGTGCAAGAAGAAGCCGGCGGTGACGTTTGGGCTGGGGTTCTTCATCTACG TCTTCATGGTGCTCTTCCATGTCTGGGTCGTGGCTTATGCCTTTGTGCCCGGCGGGCCGCTCGTGCGCGAGCGTA CGGACTGGATCATGATGACGATGATGATGCTCATCGGCGCCGGCGTGGCCGACTATAAGGCCTCACAGCCGCGAC GTCCCCAGCCACGGAGCCCCCAGACGTCACAGCATCGCAAGTTTCACGGGGTGGCGACGCTGTTGGTCAACATTC TCTTCCTCTGTGCCGCCTTTAAACGGTTCCCCAGGGCGGACCACAAGCCGTACCACGGCGAGGACCGCATCTTGA CGGCCGGCATCTGGACGGTGCACTTCTCGCTCGACAATGACATGTGGTCGTCGGAATATCGGATGCGCGACCTGA TAAAGGAGATGGAGCTGGACGTGGTTGGCCTTCTCGAGTCGGATCTGCAGCGCATCATCATGGGCAACCGTGACA CGACGCAGTTCCTGGCCGAGGATCTCGGCATGTACGTCGACTACGGGCCCGGGCCCAACAAGCACACTTGGGGCG CGGCGCTGCTGTCCAAGTTCCCGATCGTCGAGTCCAAGCACCACCTGCTGCCGAGCCCGGTAGGGGAGCTGGCGC CGGCGATACACGCGACGCTGGACGTCTACGGCGAGCTGGTCGACGTCTTCGTCTTCCACTCAGGCCAGGAGGAGG ATCCGGAGGACCGGAGGCTGCAGAGCGAGTATCTGAGCAAGCTGATGGGCTCGAGCCCGAGGCCGTCGATCCTAC TGAGCTACCTGGTGACGAAGCCGCTCGAGGGCAATTACAAGACGTACGTCAGCGAACAGTCGGGCATGCACGATA TCGACTGGACCGACTGGGATCGATGGTGCGAGTACATCCTGTACAAGGGTCTCCGGCGTGTGGGCTATGCTCGTG TCAGCCGCAGTACCATAACCGACACGGAGCTGCAGGTGGGCAAGTTTGTCGTCCCCCGCTCGGCCGCGGAGATGA CGCAGCTGGAGGCGCGGCCAGCCGAGGAACGGGACCGGCGAGTGAAGGAGTCGGAGGTACCGGAAGGGTGGAGGT TCCCGGCGCTGTTCCGGGGAGTCGGCGTGCGGGATCACCGGTATCATGTCTTTGATGAGCCGAGGTATTTCAACT AG |