Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05207
Gene name
Locationscaffold_05:2773347..2774169
Strand+
Gene length (bp)822
Transcript length (bp)822
Coding sequence length (bp)822
Protein length (aa) 274

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 67 0.45

Transmembrane Domains

Domain # Start End Length
1 228 250 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05207
MQKNKTMAETDAPISTPKRKRTHQPPPPQPPLTPVKFSFDPLKKMDSPDDGSRSPRSCVAHRFRGLALNGDTDDV
DGADPARKRRRFGDDAVCSGLGLFAPVPFRPDVAVASTEVSAQLQSRPPRRKRAGTPPLRLKRSPAAQQASGDPE
LPPVADPVRAALTWHEDEITVYDPHDADDDGTGVNGVGFKPTPAMAHARVMKRRQQMADYRRREESEARARRSQR
RRGDVLAAAAAAAAAAAAAVSSQAADKPSPRKVRFMDAENKNVAVTTV*
Coding >Ophcf2|05207
ATGCAGAAAAACAAGACCATGGCGGAAACAGACGCCCCCATCTCAACACCTAAGCGCAAGCGAACCCATCAGCCT
CCACCGCCGCAACCGCCCTTGACGCCCGTCAAGTTCTCCTTCGACCCTCTCAAGAAGATGGACTCACCCGACGAC
GGCAGCCGCAGTCCGCGCTCGTGCGTCGCCCATCGCTTCCGCGGCCTGGCTCTCAACGGCGACACGGATGACGTC
GATGGAGCGGACCCGGCGCGGAAGCGGAGGCGGTTCGGCGACGATGCTGTCTGCAGTGGGCTGGGCCTGTTCGCT
CCCGTGCCGTTCCGACCGGACGTGGCTGTTGCTTCTACTGAGGTGTCGGCGCAGTTGCAGTCGAGACCGCCGCGG
AGGAAACGGGCTGGGACGCCACCGCTACGTCTCAAGAGATCACCGGCCGCGCAGCAGGCCAGCGGCGACCCCGAG
CTACCACCCGTGGCTGACCCCGTACGCGCCGCCCTCACGTGGCACGAGGACGAAATCACCGTGTACGATCCGCAC
GACGCCGACGATGATGGCACGGGAGTCAATGGAGTAGGCTTCAAACCTACGCCCGCCATGGCGCACGCTCGCGTC
ATGAAGAGGAGGCAGCAAATGGCCGACTATCGCCGTCGCGAGGAGAGCGAGGCCAGAGCTCGCCGCAGCCAGCGC
CGACGTGGAGATGTCCTCGCTGCTGCCGCCGCCGCTGCCGCCGCCGCCGCCGCCGCAGTGTCCTCCCAGGCGGCG
GACAAGCCGTCACCGAGAAAAGTGCGGTTCATGGATGCTGAGAACAAGAATGTGGCCGTCACCACCGTTTAG
Transcript >Ophcf2|05207
ATGCAGAAAAACAAGACCATGGCGGAAACAGACGCCCCCATCTCAACACCTAAGCGCAAGCGAACCCATCAGCCT
CCACCGCCGCAACCGCCCTTGACGCCCGTCAAGTTCTCCTTCGACCCTCTCAAGAAGATGGACTCACCCGACGAC
GGCAGCCGCAGTCCGCGCTCGTGCGTCGCCCATCGCTTCCGCGGCCTGGCTCTCAACGGCGACACGGATGACGTC
GATGGAGCGGACCCGGCGCGGAAGCGGAGGCGGTTCGGCGACGATGCTGTCTGCAGTGGGCTGGGCCTGTTCGCT
CCCGTGCCGTTCCGACCGGACGTGGCTGTTGCTTCTACTGAGGTGTCGGCGCAGTTGCAGTCGAGACCGCCGCGG
AGGAAACGGGCTGGGACGCCACCGCTACGTCTCAAGAGATCACCGGCCGCGCAGCAGGCCAGCGGCGACCCCGAG
CTACCACCCGTGGCTGACCCCGTACGCGCCGCCCTCACGTGGCACGAGGACGAAATCACCGTGTACGATCCGCAC
GACGCCGACGATGATGGCACGGGAGTCAATGGAGTAGGCTTCAAACCTACGCCCGCCATGGCGCACGCTCGCGTC
ATGAAGAGGAGGCAGCAAATGGCCGACTATCGCCGTCGCGAGGAGAGCGAGGCCAGAGCTCGCCGCAGCCAGCGC
CGACGTGGAGATGTCCTCGCTGCTGCCGCCGCCGCTGCCGCCGCCGCCGCCGCCGCAGTGTCCTCCCAGGCGGCG
GACAAGCCGTCACCGAGAAAAGTGCGGTTCATGGATGCTGAGAACAAGAATGTGGCCGTCACCACCGTTTAG
Gene >Ophcf2|05207
ATGCAGAAAAACAAGACCATGGCGGAAACAGACGCCCCCATCTCAACACCTAAGCGCAAGCGAACCCATCAGCCT
CCACCGCCGCAACCGCCCTTGACGCCCGTCAAGTTCTCCTTCGACCCTCTCAAGAAGATGGACTCACCCGACGAC
GGCAGCCGCAGTCCGCGCTCGTGCGTCGCCCATCGCTTCCGCGGCCTGGCTCTCAACGGCGACACGGATGACGTC
GATGGAGCGGACCCGGCGCGGAAGCGGAGGCGGTTCGGCGACGATGCTGTCTGCAGTGGGCTGGGCCTGTTCGCT
CCCGTGCCGTTCCGACCGGACGTGGCTGTTGCTTCTACTGAGGTGTCGGCGCAGTTGCAGTCGAGACCGCCGCGG
AGGAAACGGGCTGGGACGCCACCGCTACGTCTCAAGAGATCACCGGCCGCGCAGCAGGCCAGCGGCGACCCCGAG
CTACCACCCGTGGCTGACCCCGTACGCGCCGCCCTCACGTGGCACGAGGACGAAATCACCGTGTACGATCCGCAC
GACGCCGACGATGATGGCACGGGAGTCAATGGAGTAGGCTTCAAACCTACGCCCGCCATGGCGCACGCTCGCGTC
ATGAAGAGGAGGCAGCAAATGGCCGACTATCGCCGTCGCGAGGAGAGCGAGGCCAGAGCTCGCCGCAGCCAGCGC
CGACGTGGAGATGTCCTCGCTGCTGCCGCCGCCGCTGCCGCCGCCGCCGCCGCCGCAGTGTCCTCCCAGGCGGCG
GACAAGCCGTCACCGAGAAAAGTGCGGTTCATGGATGCTGAGAACAAGAATGTGGCCGTCACCACCGTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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