Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05204
Gene name
Locationscaffold_05:2769467..2769785
Strand-
Gene length (bp)318
Transcript length (bp)318
Coding sequence length (bp)318
Protein length (aa) 106

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00085 Thioredoxin Thioredoxin 6.3E-31 5 100
PF13098 Thioredoxin_2 Thioredoxin-like domain 3.0E-07 18 91
PF13905 Thioredoxin_8 Thioredoxin-like 2.7E-06 22 85
PF14595 Thioredoxin_9 Thioredoxin 8.0E-06 21 82

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.753 0.3426 0.034 0.0813 0.1527 0.0011 0.3221 0.2194 0.2614 0.0103

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup279
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4592
Ophiocordyceps australis map64 (Brazil) OphauB2|8117
Ophiocordyceps camponoti-floridani Ophcf2|01675
Ophiocordyceps camponoti-floridani Ophcf2|05204 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|5093
Ophiocordyceps camponoti-rufipedis Ophun1|5409
Ophiocordyceps kimflemingae Ophio5|4500
Ophiocordyceps kimflemingae Ophio5|4716
Ophiocordyceps subramaniannii Hirsu2|4530
Ophiocordyceps subramaniannii Hirsu2|5995
Ophiocordyceps subramaniannii Hirsu2|6830

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05204
MSVIEVKTPQEFDDHLSKNSRVAVDFYAEWCGPCKVISPVFKKLSEQYKDIVFLSVDVDNLEAVAQKYGIRAMPT
FIMFKDGQKSDDLTGANLKGLEEKVQALAA*
Coding >Ophcf2|05204
ATGTCGGTCATTGAGGTCAAAACGCCACAGGAGTTCGATGATCATCTCAGCAAGAATTCCAGGGTCGCCGTCGAT
TTCTACGCTGAGTGGTGCGGGCCTTGCAAGGTCATCAGTCCTGTTTTCAAGAAGCTGTCGGAGCAATACAAAGAC
ATTGTCTTCCTCTCGGTCGACGTCGACAATCTCGAAGCCGTGGCTCAAAAATACGGCATTCGCGCCATGCCTACT
TTTATCATGTTCAAGGACGGTCAAAAGTCGGATGACCTGACGGGCGCCAACTTGAAGGGTCTCGAGGAGAAGGTC
CAGGCGTTGGCTGCCTAG
Transcript >Ophcf2|05204
ATGTCGGTCATTGAGGTCAAAACGCCACAGGAGTTCGATGATCATCTCAGCAAGAATTCCAGGGTCGCCGTCGAT
TTCTACGCTGAGTGGTGCGGGCCTTGCAAGGTCATCAGTCCTGTTTTCAAGAAGCTGTCGGAGCAATACAAAGAC
ATTGTCTTCCTCTCGGTCGACGTCGACAATCTCGAAGCCGTGGCTCAAAAATACGGCATTCGCGCCATGCCTACT
TTTATCATGTTCAAGGACGGTCAAAAGTCGGATGACCTGACGGGCGCCAACTTGAAGGGTCTCGAGGAGAAGGTC
CAGGCGTTGGCTGCCTAG
Gene >Ophcf2|05204
ATGTCGGTCATTGAGGTCAAAACGCCACAGGAGTTCGATGATCATCTCAGCAAGAATTCCAGGGTCGCCGTCGAT
TTCTACGCTGAGTGGTGCGGGCCTTGCAAGGTCATCAGTCCTGTTTTCAAGAAGCTGTCGGAGCAATACAAAGAC
ATTGTCTTCCTCTCGGTCGACGTCGACAATCTCGAAGCCGTGGCTCAAAAATACGGCATTCGCGCCATGCCTACT
TTTATCATGTTCAAGGACGGTCAAAAGTCGGATGACCTGACGGGCGCCAACTTGAAGGGTCTCGAGGAGAAGGTC
CAGGCGTTGGCTGCCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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