Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05197
Gene name
Locationscaffold_05:2759704..2761117
Strand-
Gene length (bp)1413
Transcript length (bp)1242
Coding sequence length (bp)1242
Protein length (aa) 414

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 25 0.45

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05197
MGAIRAFGTIFFLASSILVTAVVGNPGAGKQIGGLQASMLAEKSPLGIFMRERLQEELGDQLFPPPYADVALDES
ILPCAYERRVLSANRKDIRVNITSMIDFEFAPASEAAIIDIMSSTARVDTSHSTWTTESFHRLNESHVYEASLSA
GPWSGSVSAEEDGLTRGRSLARMSERDVTMNVATTYLCPPRTLCRVETWTYSASIRGNSTLVPMVDAQCYEAWAR
KTYVGFPPDYETDHVDFEAGGGWLYVYYAFRRLFRLDSRIMLTNLSIPSVHKQVPQWSDFGAPYYSISKLSSPSV
PVRKHGERGDSTADFFQVLPSNFENDVWWADENKYDVRFSKHVHDVIRIPTLHYDGSPKRTQVMLEIPIPSLKRN
GERLHNKGRRGAKAKRELSRDGGLGRGVRVKLLWTDVL*
Coding >Ophcf2|05197
ATGGGCGCCATAAGAGCATTCGGCACCATCTTCTTCCTCGCCAGCTCCATCCTCGTAACGGCCGTCGTGGGGAAC
CCTGGAGCCGGCAAGCAGATTGGCGGTCTGCAGGCGTCAATGCTCGCCGAGAAGTCGCCTCTGGGTATCTTCATG
AGGGAGAGGCTGCAGGAAGAGCTGGGAGACCAGCTGTTTCCTCCGCCGTACGCCGACGTCGCTCTGGATGAGAGC
ATCTTGCCCTGCGCGTATGAGCGTCGGGTCCTCAGTGCGAACCGCAAAGACATTCGGGTTAATATCACGTCGATG
ATAGACTTTGAATTTGCCCCGGCTTCGGAGGCGGCCATCATCGACATCATGAGCTCGACTGCTCGCGTTGATACT
AGTCACTCGACTTGGACGACCGAGTCATTTCACCGTCTGAACGAGAGCCATGTATACGAGGCTAGCTTGAGCGCA
GGACCTTGGTCAGGGTCTGTCAGTGCCGAAGAGGACGGCCTCACGCGCGGACGGAGCCTGGCCCGGATGTCGGAG
AGAGACGTCACCATGAACGTGGCTACGACTTACCTCTGTCCGCCCAGGACGCTGTGCAGAGTCGAGACGTGGACG
TACAGCGCGTCCATCAGGGGTAACTCGACGCTTGTTCCCATGGTTGACGCTCAGTGTTACGAGGCTTGGGCAAGG
AAGACGTACGTTGGCTTTCCGCCCGACTATGAGACGGATCATGTCGACTTCGAGGCCGGCGGAGGCTGGCTCTAC
GTCTACTATGCCTTCCGGAGGCTCTTTCGGCTGGACTCGAGAATCATGCTCACCAACCTTTCGATCCCCTCGGTT
CACAAACAGGTTCCGCAGTGGTCCGACTTCGGGGCCCCTTACTACAGCATTTCCAAGCTCAGCAGCCCCAGTGTT
CCGGTCCGAAAACACGGCGAGAGAGGCGATTCAACAGCCGATTTCTTCCAGGTGCTACCCTCCAACTTCGAGAAC
GACGTCTGGTGGGCCGACGAGAACAAGTACGACGTCAGATTCAGCAAGCATGTTCACGACGTGATTCGCATCCCG
ACGCTGCACTACGACGGTAGCCCGAAGCGGACGCAGGTTATGCTCGAGATTCCGATCCCGAGTCTGAAGCGGAAT
GGCGAGAGGCTTCATAACAAGGGGCGTAGAGGTGCCAAGGCTAAGAGGGAGCTTTCGAGGGATGGGGGTCTGGGT
AGGGGCGTTAGGGTCAAGTTGCTCTGGACTGATGTCTTGTAG
Transcript >Ophcf2|05197
ATGGGCGCCATAAGAGCATTCGGCACCATCTTCTTCCTCGCCAGCTCCATCCTCGTAACGGCCGTCGTGGGGAAC
CCTGGAGCCGGCAAGCAGATTGGCGGTCTGCAGGCGTCAATGCTCGCCGAGAAGTCGCCTCTGGGTATCTTCATG
AGGGAGAGGCTGCAGGAAGAGCTGGGAGACCAGCTGTTTCCTCCGCCGTACGCCGACGTCGCTCTGGATGAGAGC
ATCTTGCCCTGCGCGTATGAGCGTCGGGTCCTCAGTGCGAACCGCAAAGACATTCGGGTTAATATCACGTCGATG
ATAGACTTTGAATTTGCCCCGGCTTCGGAGGCGGCCATCATCGACATCATGAGCTCGACTGCTCGCGTTGATACT
AGTCACTCGACTTGGACGACCGAGTCATTTCACCGTCTGAACGAGAGCCATGTATACGAGGCTAGCTTGAGCGCA
GGACCTTGGTCAGGGTCTGTCAGTGCCGAAGAGGACGGCCTCACGCGCGGACGGAGCCTGGCCCGGATGTCGGAG
AGAGACGTCACCATGAACGTGGCTACGACTTACCTCTGTCCGCCCAGGACGCTGTGCAGAGTCGAGACGTGGACG
TACAGCGCGTCCATCAGGGGTAACTCGACGCTTGTTCCCATGGTTGACGCTCAGTGTTACGAGGCTTGGGCAAGG
AAGACGTACGTTGGCTTTCCGCCCGACTATGAGACGGATCATGTCGACTTCGAGGCCGGCGGAGGCTGGCTCTAC
GTCTACTATGCCTTCCGGAGGCTCTTTCGGCTGGACTCGAGAATCATGCTCACCAACCTTTCGATCCCCTCGGTT
CACAAACAGGTTCCGCAGTGGTCCGACTTCGGGGCCCCTTACTACAGCATTTCCAAGCTCAGCAGCCCCAGTGTT
CCGGTCCGAAAACACGGCGAGAGAGGCGATTCAACAGCCGATTTCTTCCAGGTGCTACCCTCCAACTTCGAGAAC
GACGTCTGGTGGGCCGACGAGAACAAGTACGACGTCAGATTCAGCAAGCATGTTCACGACGTGATTCGCATCCCG
ACGCTGCACTACGACGGTAGCCCGAAGCGGACGCAGGTTATGCTCGAGATTCCGATCCCGAGTCTGAAGCGGAAT
GGCGAGAGGCTTCATAACAAGGGGCGTAGAGGTGCCAAGGCTAAGAGGGAGCTTTCGAGGGATGGGGGTCTGGGT
AGGGGCGTTAGGGTCAAGTTGCTCTGGACTGATGTCTTGTAG
Gene >Ophcf2|05197
ATGGGCGCCATAAGAGCATTCGGCACCATCTTCTTCCTCGCCAGCTCCATCCTCGTAACGGCCGTCGTGGGGAAC
CCTGGAGCCGGCAAGCAGATTGGCGGTCTGCAGGCGTCAATGCTCGCCGAGAAGTCGCCTCTGGGTATCTTCATG
AGGGAGAGGCTGCAGGAAGAGCTGGGAGACCAGCTGTTTCCTCCGCCGTACGCCGACGTCGCTCTGGATGAGAGC
ATCTTGCCCTGCGCGTATGAGCGTCGGGTCCTCAGTGCGAACCGCAAAGACATTCGGGTTAATATCACGTCGATG
ATAGACTTTGAATTTGCCCCGGCTTCGGAGGCGGCCATCATCGACATCATGAGCTCGACTGCTCGCGTTGATACT
AGTCACTCGACTTGGACGACCGAGTCATTTCACCGTCTGAACGAGAGCCATGTATACGAGGCTAGCTTGAGCGCA
GGACCTTGGTCAGGGTCTGTCAGTGCCGAAGAGGACGGCCTCACGCGCGGACGGAGCCTGGCCCGGATGTCGGAG
AGAGACGTCACCATGAACGTGGCTACGACTTACCTCTGTCCGCCCAGGACGCTGTGCAGAGTCGAGACGTGGACG
TACAGCGCGTCCATCAGGGGTAACTCGACGCTTGTTCCCATGGTTGACGCTCAGTGTTACGAGGCTTGGGCAAGG
AAGACGTACGTTGGCTTTCCGCCCGACTATGAGACGGATCATGTCGACTTCGAGGCCGGCGGAGGCTGGCTCTAC
GTCTACTATGCCTTCCGGAGGCTCTTTCGGCTGGACTCGAGAATCATGCTCACCAACCTTTCGATCCCCTCGGTT
CACAAACAGGTTCCGCAGTGGTCCGACTTCGGGGCCCCTTACTACAGCATTTCCAAGCTCAGCAGCCCCAGTGTT
CCGGTCCGAAAACACGGCGAGAGAGGCGATTCAACAGCCGATTTCTTCCAGGTGCTACCCTCCAACTTCGAGAAC
GACGTCTGGTGGGCCGACGAGAACAAGTACGACGTCAGATTCAGCAAGCATGTTCACGACGTGATTCGCATCCCG
ACGCTGCACTACGACGGTAGCCCGAAGCGGACGCAGGTTATGCTCGAGATTCCGATCCCGAGTCTGAAGCGGAAT
GGCGAGAGGCTTCATAACAAGGGGCGTAGAGGTGCCAAGGCTAAGAGGGAGCTTTCGAGGGATGGGGGTCTGGGT
AGGGGCGTTAGGGTCAAGTTGCTCTGGACTGATGTCTGTAAGCAAGGGAGTCGGAAGGAGGATCGGCGGGATTGC
GGATGGGGGAGGGGAGGGTTTAGGGGTTGGTTGTTGACGTCGTGTTGACTGAGCAAGTCTTTGGCTGTGAAGGAA
GGGGAGCTTTGGGGTTGTTAGAGGCTGTTGGCTTGATGACACTGTTGCCGTCTTTAAGTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail