Protein ID | Ophcf2|05169 |
Gene name | |
Location | scaffold_05:2682350..2683976 |
Strand | + |
Gene length (bp) | 1626 |
Transcript length (bp) | 1473 |
Coding sequence length (bp) | 1473 |
Protein length (aa) | 491 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04678 | MCU | Mitochondrial calcium uniporter | 9.4E-25 | 294 | 417 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 19 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 331 | 353 | 22 |
2 | 363 | 382 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|05169 MHVTATAQLSTLLPPIVGRRNNDIPTTQCEKEAVARHRAMSSLLRRPAARLTAVTTLKRQPITRRGLASRPQEDQ ANSNQEWQRLTTSKSQQRKVNDRPWQREGSNSLPKATSPDPSGGDLTKGRLLTTPTRLLKLILPMPFHPEQEHIN ASDEEKKKWSGRAVEPLALLVHPQQPLSYLERLIQAEIPPMRTDGREKLPELVFRAEAETESSKSSSGDKDEKGG DDDGVNVAAYSGLGREGPGKSSDKARWVRWSSSTEVGDFIRDAARGREFAIGIEGLDRELRVAVPSFKDRTYYLR TRLRKMSRQIDQMSRVKKGCDLAAHQGANRLAKGGFAALAGWWGIVYYVTFHTEMGWDMVEPVTYLAGLTTIMAG YLWFLFISRDLSYKAAMNLTVSRRQTALYQERGFDPHKWEQLVHEANLLRREVKMAATEYDVEWDEMRDLGGEEV LEVLEEERGDRKRRGGKGAEEEGEEEEEEEDGERGGKTKE* |
Coding | >Ophcf2|05169 ATGCACGTGACTGCAACGGCACAGCTCAGCACGCTTCTACCACCCATCGTAGGAAGACGCAACAACGACATCCCG ACCACGCAGTGCGAGAAAGAGGCCGTGGCGAGGCACCGCGCCATGAGCAGTCTCCTGAGACGGCCAGCAGCTCGT CTCACCGCAGTAACGACGCTCAAACGACAACCCATCACCAGACGAGGCCTGGCATCGCGCCCGCAAGAAGATCAA GCAAACAGCAACCAAGAATGGCAGCGCCTAACGACCAGCAAAAGCCAGCAAAGAAAAGTCAATGACCGTCCATGG CAGCGCGAGGGAAGCAACTCCCTTCCCAAGGCCACATCGCCTGACCCGTCCGGCGGTGACTTGACAAAAGGGAGA CTGTTGACGACGCCCACGCGGCTTCTCAAGCTCATCCTCCCTATGCCCTTTCACCCGGAACAGGAGCACATCAAC GCCAGCGACGAGGAGAAGAAGAAATGGAGCGGGCGTGCGGTCGAACCCCTGGCTCTACTGGTTCACCCTCAGCAG CCTTTATCGTACCTCGAAAGACTGATCCAAGCCGAGATCCCACCGATGCGAACCGACGGCCGCGAGAAGCTCCCA GAGCTAGTCTTCCGAGCCGAAGCCGAAACAGAATCCTCCAAGTCATCATCCGGCGACAAAGACGAGAAAGGTGGC GACGACGACGGCGTCAACGTAGCCGCCTACTCGGGCCTCGGCCGCGAAGGTCCAGGGAAGAGCAGCGATAAGGCG CGTTGGGTACGATGGAGCAGCAGCACCGAGGTCGGCGACTTCATCCGCGACGCCGCTCGTGGCCGCGAATTCGCC ATAGGAATCGAAGGGTTAGATCGCGAGCTGCGGGTAGCGGTCCCGAGCTTCAAGGACAGAACGTACTACCTCCGC ACACGACTGCGCAAGATGTCGCGGCAAATCGACCAAATGTCCCGCGTCAAGAAAGGGTGCGATCTCGCCGCCCAT CAGGGAGCAAACAGACTGGCAAAGGGTGGTTTCGCTGCGCTGGCGGGCTGGTGGGGGATCGTCTACTACGTCACC TTCCACACGGAAATGGGCTGGGATATGGTCGAGCCCGTGACGTATCTGGCAGGACTGACGACCATCATGGCCGGA TACCTCTGGTTTCTCTTCATCAGCCGCGATCTCAGCTACAAGGCTGCCATGAACCTCACCGTCTCCCGCCGGCAG ACGGCTCTGTATCAGGAGCGGGGGTTCGACCCGCACAAGTGGGAGCAGTTGGTGCACGAGGCCAATCTGCTGAGG CGGGAGGTGAAGATGGCGGCTACCGAGTACGATGTCGAGTGGGATGAGATGAGGGACTTGGGCGGTGAGGAGGTG TTGGAGGTGCTGGAGGAGGAGCGTGGTGATAGGAAGCGTCGGGGTGGGAAGGGGGCCGAGGAGGAGGGGGAGGAG GAGGAGGAGGAGGAGGATGGCGAGAGGGGAGGGAAGACGAAGGAGTGA |
Transcript | >Ophcf2|05169 ATGCACGTGACTGCAACGGCACAGCTCAGCACGCTTCTACCACCCATCGTAGGAAGACGCAACAACGACATCCCG ACCACGCAGTGCGAGAAAGAGGCCGTGGCGAGGCACCGCGCCATGAGCAGTCTCCTGAGACGGCCAGCAGCTCGT CTCACCGCAGTAACGACGCTCAAACGACAACCCATCACCAGACGAGGCCTGGCATCGCGCCCGCAAGAAGATCAA GCAAACAGCAACCAAGAATGGCAGCGCCTAACGACCAGCAAAAGCCAGCAAAGAAAAGTCAATGACCGTCCATGG CAGCGCGAGGGAAGCAACTCCCTTCCCAAGGCCACATCGCCTGACCCGTCCGGCGGTGACTTGACAAAAGGGAGA CTGTTGACGACGCCCACGCGGCTTCTCAAGCTCATCCTCCCTATGCCCTTTCACCCGGAACAGGAGCACATCAAC GCCAGCGACGAGGAGAAGAAGAAATGGAGCGGGCGTGCGGTCGAACCCCTGGCTCTACTGGTTCACCCTCAGCAG CCTTTATCGTACCTCGAAAGACTGATCCAAGCCGAGATCCCACCGATGCGAACCGACGGCCGCGAGAAGCTCCCA GAGCTAGTCTTCCGAGCCGAAGCCGAAACAGAATCCTCCAAGTCATCATCCGGCGACAAAGACGAGAAAGGTGGC GACGACGACGGCGTCAACGTAGCCGCCTACTCGGGCCTCGGCCGCGAAGGTCCAGGGAAGAGCAGCGATAAGGCG CGTTGGGTACGATGGAGCAGCAGCACCGAGGTCGGCGACTTCATCCGCGACGCCGCTCGTGGCCGCGAATTCGCC ATAGGAATCGAAGGGTTAGATCGCGAGCTGCGGGTAGCGGTCCCGAGCTTCAAGGACAGAACGTACTACCTCCGC ACACGACTGCGCAAGATGTCGCGGCAAATCGACCAAATGTCCCGCGTCAAGAAAGGGTGCGATCTCGCCGCCCAT CAGGGAGCAAACAGACTGGCAAAGGGTGGTTTCGCTGCGCTGGCGGGCTGGTGGGGGATCGTCTACTACGTCACC TTCCACACGGAAATGGGCTGGGATATGGTCGAGCCCGTGACGTATCTGGCAGGACTGACGACCATCATGGCCGGA TACCTCTGGTTTCTCTTCATCAGCCGCGATCTCAGCTACAAGGCTGCCATGAACCTCACCGTCTCCCGCCGGCAG ACGGCTCTGTATCAGGAGCGGGGGTTCGACCCGCACAAGTGGGAGCAGTTGGTGCACGAGGCCAATCTGCTGAGG CGGGAGGTGAAGATGGCGGCTACCGAGTACGATGTCGAGTGGGATGAGATGAGGGACTTGGGCGGTGAGGAGGTG TTGGAGGTGCTGGAGGAGGAGCGTGGTGATAGGAAGCGTCGGGGTGGGAAGGGGGCCGAGGAGGAGGGGGAGGAG GAGGAGGAGGAGGAGGATGGCGAGAGGGGAGGGAAGACGAAGGAGTGA |
Gene | >Ophcf2|05169 ATGCACGTGACTGCAACGGCACAGCTCAGCACGTGAGACACCGTCATCCTGCAGGAATGCTGGCGCGTCGCAGTG AACACCCATGACATCATCAGGCTTCTACCACCCATCGTAGGAAGACGCAACAACGACATCCCGACCACGCAGTGC GAGAAAGAGGCCGTGGCGAGGCACCGCGCCATGAGCAGTCTCCTGAGACGGCCAGCAGCTCGTCTCACCGCAGTA ACGACGCTCAAACGACAACCCATCACCAGACGAGGCCTGGCATCGCGCCCGCAAGAAGATCAAGCAAACAGCAAC CAAGAATGGCAGCGCCTAACGACCAGCAAAAGCCAGCAAAGAAAAGTCAATGACCGTCCATGGCAGCGCGAGGGA AGCAACTCCCTTCCCAAGGCCACATCGCCTGACCCGTCCGGCGGTGACTTGACAAAAGGTACGACGCGCAAAAGG GGGAACTAAACTGTTCAGCTGCGCCGGATAAACAAGAAGGAGTGGGGAAACAAGAGCTGACGCGGGTCGGTAGGG AGACTGTTGACGACGCCCACGCGGCTTCTCAAGCTCATCCTCCCTATGCCCTTTCACCCGGAACAGGAGCACATC AACGCCAGCGACGAGGAGAAGAAGAAATGGAGCGGGCGTGCGGTCGAACCCCTGGCTCTACTGGTTCACCCTCAG CAGCCTTTATCGTACCTCGAAAGACTGATCCAAGCCGAGATCCCACCGATGCGAACCGACGGCCGCGAGAAGCTC CCAGAGCTAGTCTTCCGAGCCGAAGCCGAAACAGAATCCTCCAAGTCATCATCCGGCGACAAAGACGAGAAAGGT GGCGACGACGACGGCGTCAACGTAGCCGCCTACTCGGGCCTCGGCCGCGAAGGTCCAGGGAAGAGCAGCGATAAG GCGCGTTGGGTACGATGGAGCAGCAGCACCGAGGTCGGCGACTTCATCCGCGACGCCGCTCGTGGCCGCGAATTC GCCATAGGAATCGAAGGGTTAGATCGCGAGCTGCGGGTAGCGGTCCCGAGCTTCAAGGACAGAACGTACTACCTC CGCACACGACTGCGCAAGATGTCGCGGCAAATCGACCAAATGTCCCGCGTCAAGAAAGGGTGCGATCTCGCCGCC CATCAGGGAGCAAACAGACTGGCAAAGGGTGGTTTCGCTGCGCTGGCGGGCTGGTGGGGGATCGTCTACTACGTC ACCTTCCACACGGAAATGGGCTGGGATATGGTCGAGCCCGTGACGTATCTGGCAGGACTGACGACCATCATGGCC GGATACCTCTGGTTTCTCTTCATCAGCCGCGATCTCAGCTACAAGGCTGCCATGAACCTCACCGTCTCCCGCCGG CAGACGGCTCTGTATCAGGAGCGGGGGTTCGACCCGCACAAGTGGGAGCAGTTGGTGCACGAGGCCAATCTGCTG AGGCGGGAGGTGAAGATGGCGGCTACCGAGTACGATGTCGAGTGGGATGAGATGAGGGACTTGGGCGGTGAGGAG GTGTTGGAGGTGCTGGAGGAGGAGCGTGGTGATAGGAAGCGTCGGGGTGGGAAGGGGGCCGAGGAGGAGGGGGAG GAGGAGGAGGAGGAGGAGGATGGCGAGAGGGGAGGGAAGACGAAGGAGTGA |