Protein ID | Ophcf2|05149 |
Gene name | |
Location | scaffold_05:2630857..2633464 |
Strand | + |
Gene length (bp) | 2607 |
Transcript length (bp) | 2607 |
Coding sequence length (bp) | 2607 |
Protein length (aa) | 869 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07993 | NAD_binding_4 | Male sterility protein | 2.6E-41 | 499 | 716 |
PF00501 | AMP-binding | AMP-binding enzyme | 1.6E-36 | 1 | 239 |
PF01370 | Epimerase | NAD dependent epimerase/dehydratase family | 1.5E-08 | 497 | 669 |
PF00550 | PP-binding | Phosphopantetheine attachment site | 1.3E-06 | 383 | 436 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 58 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|05149 MITHQNLSSALHHQAPLLAYTPSTRILDFSSYSFDVSIANLFRALFCGGCLCVPSDADRLDDLASTINRLRANVA HLTPSVARLLRPERVPGLSRLHLGGEPVCLADVEPWFETGSVRVLGGYGPSECTAASTICRPPASPADLVACIGS GAGLVTWVVDPDDHHRLLPPGCVGELLLEGPLVGRGYLADPVRTEAVFIRNPVWLSRPARLYKTGDLVRQTPDGS LLFVGRNDTQVKIRGQRVELTEVELRVRQLMMADAGRGPVVAEVVVHGCLPSLAVFLLLNSDESSSSSNSSNSSN SSNSSSKNPHCALLSVATDVRDALAARLPAYMVPTLFFSVSELPMTAAGKTDRRRLREMGAAVAAAQRQAVAERQ PTSSPELKLQRILARVLALEPACVGLHDCFFRLGGDSLGAIKVVAAAREHGIRLVVADLYRQSPASIQNLALVAS VPRSKMARIHLMAEIDRHDAMLIASPQTLPNDMVNGHDPSSRHPLTVLVTGANGFIGTQILRQLLDHRLVNRVIG LVRGSTASVAWERTVDAAVRAGWWSDVYADKLDVWAGDLTLPRLGLDVSRWETLLMTVDVVIHNGARVHFVAGYR VLEAANVGSTMELLRFTNKTRIVYVSTARRRDPAEESDEEVALELAGNDDVTAYSQTKFVAEALVRRVAVRRPPD RRHAVVSPGFVIGTPTEGVANADDFLWRLAAACIRTGVYDEEEASAWIPLSDAATAAGAIVDAAVSEETSSLVTQ VKGGMTLSDFWAVLIGMGYQLRPSPSQDWLASVNSDMEARGDNHPLRPLAHLLHVSRADVEWADSWREDSVAAVR LRAAVRKSAEFLARAGFLPRPASTETDGDSRTTAGVAFSRTGR* |
Coding | >Ophcf2|05149 ATGATAACCCACCAGAACCTCTCCTCGGCCCTCCACCACCAAGCCCCCCTCCTCGCCTACACGCCCTCGACCCGC ATCCTCGACTTCTCCTCCTACAGCTTCGACGTCTCCATCGCCAACCTCTTCCGCGCCCTCTTCTGCGGCGGCTGC CTCTGCGTCCCCAGCGACGCAGATCGTCTCGACGACCTGGCCTCCACCATCAACCGTCTTCGCGCAAACGTCGCC CATCTGACGCCCTCGGTTGCCCGTCTTCTGCGCCCGGAGCGTGTGCCGGGGCTCAGCCGTCTGCATCTCGGAGGC GAGCCCGTCTGTCTCGCCGATGTAGAGCCCTGGTTCGAGACCGGCTCGGTCCGCGTCCTCGGTGGTTACGGACCC AGCGAGTGTACAGCCGCCAGCACCATCTGCCGTCCGCCCGCCAGTCCGGCCGATCTCGTGGCCTGCATCGGCTCC GGCGCCGGCCTCGTCACTTGGGTCGTCGATCCGGACGATCATCACCGTCTTCTGCCGCCGGGTTGCGTCGGCGAG CTTCTGCTGGAAGGGCCCCTCGTCGGAAGGGGATATCTAGCCGATCCGGTCAGGACCGAAGCCGTCTTCATCCGA AACCCGGTCTGGCTCTCCCGGCCGGCCCGCCTGTATAAGACGGGCGACCTCGTGCGTCAGACTCCAGACGGGTCC CTCCTGTTCGTCGGCCGAAACGACACCCAGGTCAAGATCCGCGGACAGAGAGTCGAGCTGACCGAGGTCGAGCTC CGCGTGCGGCAGCTGATGATGGCCGACGCTGGGAGGGGGCCCGTTGTCGCCGAGGTCGTCGTCCACGGCTGTCTG CCATCACTGGCCGTCTTCCTCCTTCTGAACAGCGACGAAAGCAGCAGTAGCAGCAATAGCAGCAATAGCAGCAAT AGCAGCAATAGCAGCAGCAAAAACCCCCACTGTGCCCTCCTCTCCGTCGCCACCGACGTCCGCGATGCCCTCGCC GCCCGTCTCCCAGCCTACATGGTCCCGACCCTCTTCTTCTCCGTGTCGGAGCTTCCCATGACAGCAGCGGGAAAG ACGGATAGGAGGCGTCTCCGCGAGATGGGCGCCGCCGTCGCCGCCGCTCAGAGACAAGCCGTGGCGGAGCGGCAG CCGACTTCTTCGCCCGAGCTCAAACTTCAGCGTATCCTGGCTCGCGTCCTGGCCCTCGAACCCGCCTGCGTCGGG CTGCATGATTGCTTCTTTCGCCTCGGTGGTGACTCGCTCGGGGCCATAAAGGTCGTTGCCGCCGCTCGAGAGCAT GGTATCCGGCTGGTCGTCGCAGACTTGTATCGTCAGTCGCCGGCCAGCATCCAGAACCTGGCCCTTGTAGCATCC GTTCCGCGATCAAAGATGGCTAGAATCCATCTCATGGCCGAGATTGATCGTCACGACGCCATGCTCATCGCCTCT CCCCAGACTCTCCCCAACGACATGGTGAACGGTCACGATCCCTCCTCTCGCCATCCACTTACCGTCCTCGTCACC GGCGCCAACGGCTTCATCGGCACGCAGATCCTACGCCAGCTCCTCGACCACCGTCTCGTCAACCGCGTCATCGGC CTCGTCCGCGGCAGCACCGCCTCCGTAGCCTGGGAACGCACCGTCGACGCCGCCGTCCGGGCCGGCTGGTGGTCC GACGTCTACGCCGATAAGCTCGACGTTTGGGCCGGTGACCTGACGCTGCCCCGGCTGGGTCTCGACGTCAGCCGC TGGGAGACGTTGCTAATGACCGTCGACGTCGTCATCCACAACGGCGCGCGTGTCCACTTCGTCGCCGGCTATCGC GTTCTCGAGGCCGCCAACGTCGGCTCTACAATGGAGCTCCTGCGGTTCACGAACAAGACGAGGATCGTGTACGTG TCGACGGCTCGTCGTCGTGACCCGGCCGAGGAGAGCGACGAGGAGGTGGCCCTCGAGCTGGCCGGCAACGACGAC GTCACTGCCTACAGCCAAACCAAGTTCGTCGCCGAGGCCCTCGTCCGTCGAGTCGCAGTCCGCCGCCCTCCAGAC CGTCGACACGCCGTCGTCAGCCCGGGCTTCGTCATTGGAACCCCGACCGAGGGCGTGGCCAACGCCGATGACTTC CTTTGGCGGCTAGCAGCGGCTTGCATCAGAACGGGCGTATACGACGAGGAAGAAGCCTCAGCCTGGATTCCTCTA TCAGACGCGGCCACGGCAGCCGGAGCCATCGTCGACGCGGCCGTCAGCGAGGAGACGAGCTCGCTGGTGACGCAG GTCAAGGGCGGCATGACCCTATCCGACTTCTGGGCCGTCCTCATCGGCATGGGTTACCAGCTCAGACCGTCTCCG TCGCAGGACTGGCTGGCGTCCGTCAACAGCGACATGGAAGCTCGAGGCGACAATCATCCACTAAGACCATTGGCG CACCTCCTTCACGTCTCGAGGGCCGACGTCGAGTGGGCCGACAGCTGGAGGGAAGACAGCGTTGCGGCCGTGAGA TTGAGAGCGGCCGTGAGGAAGAGCGCCGAGTTTCTGGCCCGGGCTGGCTTCCTGCCTCGACCTGCGTCGACGGAG ACGGATGGGGATTCACGCACAACGGCTGGCGTGGCCTTTTCGAGGACTGGACGTTGA |
Transcript | >Ophcf2|05149 ATGATAACCCACCAGAACCTCTCCTCGGCCCTCCACCACCAAGCCCCCCTCCTCGCCTACACGCCCTCGACCCGC ATCCTCGACTTCTCCTCCTACAGCTTCGACGTCTCCATCGCCAACCTCTTCCGCGCCCTCTTCTGCGGCGGCTGC CTCTGCGTCCCCAGCGACGCAGATCGTCTCGACGACCTGGCCTCCACCATCAACCGTCTTCGCGCAAACGTCGCC CATCTGACGCCCTCGGTTGCCCGTCTTCTGCGCCCGGAGCGTGTGCCGGGGCTCAGCCGTCTGCATCTCGGAGGC GAGCCCGTCTGTCTCGCCGATGTAGAGCCCTGGTTCGAGACCGGCTCGGTCCGCGTCCTCGGTGGTTACGGACCC AGCGAGTGTACAGCCGCCAGCACCATCTGCCGTCCGCCCGCCAGTCCGGCCGATCTCGTGGCCTGCATCGGCTCC GGCGCCGGCCTCGTCACTTGGGTCGTCGATCCGGACGATCATCACCGTCTTCTGCCGCCGGGTTGCGTCGGCGAG CTTCTGCTGGAAGGGCCCCTCGTCGGAAGGGGATATCTAGCCGATCCGGTCAGGACCGAAGCCGTCTTCATCCGA AACCCGGTCTGGCTCTCCCGGCCGGCCCGCCTGTATAAGACGGGCGACCTCGTGCGTCAGACTCCAGACGGGTCC CTCCTGTTCGTCGGCCGAAACGACACCCAGGTCAAGATCCGCGGACAGAGAGTCGAGCTGACCGAGGTCGAGCTC CGCGTGCGGCAGCTGATGATGGCCGACGCTGGGAGGGGGCCCGTTGTCGCCGAGGTCGTCGTCCACGGCTGTCTG CCATCACTGGCCGTCTTCCTCCTTCTGAACAGCGACGAAAGCAGCAGTAGCAGCAATAGCAGCAATAGCAGCAAT AGCAGCAATAGCAGCAGCAAAAACCCCCACTGTGCCCTCCTCTCCGTCGCCACCGACGTCCGCGATGCCCTCGCC GCCCGTCTCCCAGCCTACATGGTCCCGACCCTCTTCTTCTCCGTGTCGGAGCTTCCCATGACAGCAGCGGGAAAG ACGGATAGGAGGCGTCTCCGCGAGATGGGCGCCGCCGTCGCCGCCGCTCAGAGACAAGCCGTGGCGGAGCGGCAG CCGACTTCTTCGCCCGAGCTCAAACTTCAGCGTATCCTGGCTCGCGTCCTGGCCCTCGAACCCGCCTGCGTCGGG CTGCATGATTGCTTCTTTCGCCTCGGTGGTGACTCGCTCGGGGCCATAAAGGTCGTTGCCGCCGCTCGAGAGCAT GGTATCCGGCTGGTCGTCGCAGACTTGTATCGTCAGTCGCCGGCCAGCATCCAGAACCTGGCCCTTGTAGCATCC GTTCCGCGATCAAAGATGGCTAGAATCCATCTCATGGCCGAGATTGATCGTCACGACGCCATGCTCATCGCCTCT CCCCAGACTCTCCCCAACGACATGGTGAACGGTCACGATCCCTCCTCTCGCCATCCACTTACCGTCCTCGTCACC GGCGCCAACGGCTTCATCGGCACGCAGATCCTACGCCAGCTCCTCGACCACCGTCTCGTCAACCGCGTCATCGGC CTCGTCCGCGGCAGCACCGCCTCCGTAGCCTGGGAACGCACCGTCGACGCCGCCGTCCGGGCCGGCTGGTGGTCC GACGTCTACGCCGATAAGCTCGACGTTTGGGCCGGTGACCTGACGCTGCCCCGGCTGGGTCTCGACGTCAGCCGC TGGGAGACGTTGCTAATGACCGTCGACGTCGTCATCCACAACGGCGCGCGTGTCCACTTCGTCGCCGGCTATCGC GTTCTCGAGGCCGCCAACGTCGGCTCTACAATGGAGCTCCTGCGGTTCACGAACAAGACGAGGATCGTGTACGTG TCGACGGCTCGTCGTCGTGACCCGGCCGAGGAGAGCGACGAGGAGGTGGCCCTCGAGCTGGCCGGCAACGACGAC GTCACTGCCTACAGCCAAACCAAGTTCGTCGCCGAGGCCCTCGTCCGTCGAGTCGCAGTCCGCCGCCCTCCAGAC CGTCGACACGCCGTCGTCAGCCCGGGCTTCGTCATTGGAACCCCGACCGAGGGCGTGGCCAACGCCGATGACTTC CTTTGGCGGCTAGCAGCGGCTTGCATCAGAACGGGCGTATACGACGAGGAAGAAGCCTCAGCCTGGATTCCTCTA TCAGACGCGGCCACGGCAGCCGGAGCCATCGTCGACGCGGCCGTCAGCGAGGAGACGAGCTCGCTGGTGACGCAG GTCAAGGGCGGCATGACCCTATCCGACTTCTGGGCCGTCCTCATCGGCATGGGTTACCAGCTCAGACCGTCTCCG TCGCAGGACTGGCTGGCGTCCGTCAACAGCGACATGGAAGCTCGAGGCGACAATCATCCACTAAGACCATTGGCG CACCTCCTTCACGTCTCGAGGGCCGACGTCGAGTGGGCCGACAGCTGGAGGGAAGACAGCGTTGCGGCCGTGAGA TTGAGAGCGGCCGTGAGGAAGAGCGCCGAGTTTCTGGCCCGGGCTGGCTTCCTGCCTCGACCTGCGTCGACGGAG ACGGATGGGGATTCACGCACAACGGCTGGCGTGGCCTTTTCGAGGACTGGACGTTGA |
Gene | >Ophcf2|05149 ATGATAACCCACCAGAACCTCTCCTCGGCCCTCCACCACCAAGCCCCCCTCCTCGCCTACACGCCCTCGACCCGC ATCCTCGACTTCTCCTCCTACAGCTTCGACGTCTCCATCGCCAACCTCTTCCGCGCCCTCTTCTGCGGCGGCTGC CTCTGCGTCCCCAGCGACGCAGATCGTCTCGACGACCTGGCCTCCACCATCAACCGTCTTCGCGCAAACGTCGCC CATCTGACGCCCTCGGTTGCCCGTCTTCTGCGCCCGGAGCGTGTGCCGGGGCTCAGCCGTCTGCATCTCGGAGGC GAGCCCGTCTGTCTCGCCGATGTAGAGCCCTGGTTCGAGACCGGCTCGGTCCGCGTCCTCGGTGGTTACGGACCC AGCGAGTGTACAGCCGCCAGCACCATCTGCCGTCCGCCCGCCAGTCCGGCCGATCTCGTGGCCTGCATCGGCTCC GGCGCCGGCCTCGTCACTTGGGTCGTCGATCCGGACGATCATCACCGTCTTCTGCCGCCGGGTTGCGTCGGCGAG CTTCTGCTGGAAGGGCCCCTCGTCGGAAGGGGATATCTAGCCGATCCGGTCAGGACCGAAGCCGTCTTCATCCGA AACCCGGTCTGGCTCTCCCGGCCGGCCCGCCTGTATAAGACGGGCGACCTCGTGCGTCAGACTCCAGACGGGTCC CTCCTGTTCGTCGGCCGAAACGACACCCAGGTCAAGATCCGCGGACAGAGAGTCGAGCTGACCGAGGTCGAGCTC CGCGTGCGGCAGCTGATGATGGCCGACGCTGGGAGGGGGCCCGTTGTCGCCGAGGTCGTCGTCCACGGCTGTCTG CCATCACTGGCCGTCTTCCTCCTTCTGAACAGCGACGAAAGCAGCAGTAGCAGCAATAGCAGCAATAGCAGCAAT AGCAGCAATAGCAGCAGCAAAAACCCCCACTGTGCCCTCCTCTCCGTCGCCACCGACGTCCGCGATGCCCTCGCC GCCCGTCTCCCAGCCTACATGGTCCCGACCCTCTTCTTCTCCGTGTCGGAGCTTCCCATGACAGCAGCGGGAAAG ACGGATAGGAGGCGTCTCCGCGAGATGGGCGCCGCCGTCGCCGCCGCTCAGAGACAAGCCGTGGCGGAGCGGCAG CCGACTTCTTCGCCCGAGCTCAAACTTCAGCGTATCCTGGCTCGCGTCCTGGCCCTCGAACCCGCCTGCGTCGGG CTGCATGATTGCTTCTTTCGCCTCGGTGGTGACTCGCTCGGGGCCATAAAGGTCGTTGCCGCCGCTCGAGAGCAT GGTATCCGGCTGGTCGTCGCAGACTTGTATCGTCAGTCGCCGGCCAGCATCCAGAACCTGGCCCTTGTAGCATCC GTTCCGCGATCAAAGATGGCTAGAATCCATCTCATGGCCGAGATTGATCGTCACGACGCCATGCTCATCGCCTCT CCCCAGACTCTCCCCAACGACATGGTGAACGGTCACGATCCCTCCTCTCGCCATCCACTTACCGTCCTCGTCACC GGCGCCAACGGCTTCATCGGCACGCAGATCCTACGCCAGCTCCTCGACCACCGTCTCGTCAACCGCGTCATCGGC CTCGTCCGCGGCAGCACCGCCTCCGTAGCCTGGGAACGCACCGTCGACGCCGCCGTCCGGGCCGGCTGGTGGTCC GACGTCTACGCCGATAAGCTCGACGTTTGGGCCGGTGACCTGACGCTGCCCCGGCTGGGTCTCGACGTCAGCCGC TGGGAGACGTTGCTAATGACCGTCGACGTCGTCATCCACAACGGCGCGCGTGTCCACTTCGTCGCCGGCTATCGC GTTCTCGAGGCCGCCAACGTCGGCTCTACAATGGAGCTCCTGCGGTTCACGAACAAGACGAGGATCGTGTACGTG TCGACGGCTCGTCGTCGTGACCCGGCCGAGGAGAGCGACGAGGAGGTGGCCCTCGAGCTGGCCGGCAACGACGAC GTCACTGCCTACAGCCAAACCAAGTTCGTCGCCGAGGCCCTCGTCCGTCGAGTCGCAGTCCGCCGCCCTCCAGAC CGTCGACACGCCGTCGTCAGCCCGGGCTTCGTCATTGGAACCCCGACCGAGGGCGTGGCCAACGCCGATGACTTC CTTTGGCGGCTAGCAGCGGCTTGCATCAGAACGGGCGTATACGACGAGGAAGAAGCCTCAGCCTGGATTCCTCTA TCAGACGCGGCCACGGCAGCCGGAGCCATCGTCGACGCGGCCGTCAGCGAGGAGACGAGCTCGCTGGTGACGCAG GTCAAGGGCGGCATGACCCTATCCGACTTCTGGGCCGTCCTCATCGGCATGGGTTACCAGCTCAGACCGTCTCCG TCGCAGGACTGGCTGGCGTCCGTCAACAGCGACATGGAAGCTCGAGGCGACAATCATCCACTAAGACCATTGGCG CACCTCCTTCACGTCTCGAGGGCCGACGTCGAGTGGGCCGACAGCTGGAGGGAAGACAGCGTTGCGGCCGTGAGA TTGAGAGCGGCCGTGAGGAAGAGCGCCGAGTTTCTGGCCCGGGCTGGCTTCCTGCCTCGACCTGCGTCGACGGAG ACGGATGGGGATTCACGCACAACGGCTGGCGTGGCCTTTTCGAGGACTGGACGTTGA |