Protein ID | Ophcf2|05149 |
Gene name | |
Location | scaffold_05:2630857..2633464 |
Strand | + |
Gene length (bp) | 2607 |
Transcript length (bp) | 2607 |
Coding sequence length (bp) | 2607 |
Protein length (aa) | 869 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07993 | NAD_binding_4 | Male sterility protein | 2.6E-41 | 499 | 716 |
PF00501 | AMP-binding | AMP-binding enzyme | 1.6E-36 | 1 | 239 |
PF01370 | Epimerase | NAD dependent epimerase/dehydratase family | 1.5E-08 | 497 | 669 |
PF00550 | PP-binding | Phosphopantetheine attachment site | 1.3E-06 | 383 | 436 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | Peroxisomal targeting signal | 0.6477 | 0.3213 | 0.1705 | 0.0987 | 0.3742 | 0.1668 | 0.1229 | 0.08 | 0.1543 | 0.4304 |
Gene cluster ID | Type of secondary metabolism gene |
---|---|
Cluster 20 | NRPS-like |
Orthofinder run ID | 4 |
Orthogroup | 5 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|05149 MITHQNLSSALHHQAPLLAYTPSTRILDFSSYSFDVSIANLFRALFCGGCLCVPSDADRLDDLASTINRLRANVA HLTPSVARLLRPERVPGLSRLHLGGEPVCLADVEPWFETGSVRVLGGYGPSECTAASTICRPPASPADLVACIGS GAGLVTWVVDPDDHHRLLPPGCVGELLLEGPLVGRGYLADPVRTEAVFIRNPVWLSRPARLYKTGDLVRQTPDGS LLFVGRNDTQVKIRGQRVELTEVELRVRQLMMADAGRGPVVAEVVVHGCLPSLAVFLLLNSDESSSSSNSSNSSN SSNSSSKNPHCALLSVATDVRDALAARLPAYMVPTLFFSVSELPMTAAGKTDRRRLREMGAAVAAAQRQAVAERQ PTSSPELKLQRILARVLALEPACVGLHDCFFRLGGDSLGAIKVVAAAREHGIRLVVADLYRQSPASIQNLALVAS VPRSKMARIHLMAEIDRHDAMLIASPQTLPNDMVNGHDPSSRHPLTVLVTGANGFIGTQILRQLLDHRLVNRVIG LVRGSTASVAWERTVDAAVRAGWWSDVYADKLDVWAGDLTLPRLGLDVSRWETLLMTVDVVIHNGARVHFVAGYR VLEAANVGSTMELLRFTNKTRIVYVSTARRRDPAEESDEEVALELAGNDDVTAYSQTKFVAEALVRRVAVRRPPD RRHAVVSPGFVIGTPTEGVANADDFLWRLAAACIRTGVYDEEEASAWIPLSDAATAAGAIVDAAVSEETSSLVTQ VKGGMTLSDFWAVLIGMGYQLRPSPSQDWLASVNSDMEARGDNHPLRPLAHLLHVSRADVEWADSWREDSVAAVR LRAAVRKSAEFLARAGFLPRPASTETDGDSRTTAGVAFSRTGR* |
Coding | >Ophcf2|05149 ATGATAACCCACCAGAACCTCTCCTCGGCCCTCCACCACCAAGCCCCCCTCCTCGCCTACACGCCCTCGACCCGC ATCCTCGACTTCTCCTCCTACAGCTTCGACGTCTCCATCGCCAACCTCTTCCGCGCCCTCTTCTGCGGCGGCTGC CTCTGCGTCCCCAGCGACGCAGATCGTCTCGACGACCTGGCCTCCACCATCAACCGTCTTCGCGCAAACGTCGCC CATCTGACGCCCTCGGTTGCCCGTCTTCTGCGCCCGGAGCGTGTGCCGGGGCTCAGCCGTCTGCATCTCGGAGGC GAGCCCGTCTGTCTCGCCGATGTAGAGCCCTGGTTCGAGACCGGCTCGGTCCGCGTCCTCGGTGGTTACGGACCC AGCGAGTGTACAGCCGCCAGCACCATCTGCCGTCCGCCCGCCAGTCCGGCCGATCTCGTGGCCTGCATCGGCTCC GGCGCCGGCCTCGTCACTTGGGTCGTCGATCCGGACGATCATCACCGTCTTCTGCCGCCGGGTTGCGTCGGCGAG CTTCTGCTGGAAGGGCCCCTCGTCGGAAGGGGATATCTAGCCGATCCGGTCAGGACCGAAGCCGTCTTCATCCGA AACCCGGTCTGGCTCTCCCGGCCGGCCCGCCTGTATAAGACGGGCGACCTCGTGCGTCAGACTCCAGACGGGTCC CTCCTGTTCGTCGGCCGAAACGACACCCAGGTCAAGATCCGCGGACAGAGAGTCGAGCTGACCGAGGTCGAGCTC CGCGTGCGGCAGCTGATGATGGCCGACGCTGGGAGGGGGCCCGTTGTCGCCGAGGTCGTCGTCCACGGCTGTCTG CCATCACTGGCCGTCTTCCTCCTTCTGAACAGCGACGAAAGCAGCAGTAGCAGCAATAGCAGCAATAGCAGCAAT AGCAGCAATAGCAGCAGCAAAAACCCCCACTGTGCCCTCCTCTCCGTCGCCACCGACGTCCGCGATGCCCTCGCC GCCCGTCTCCCAGCCTACATGGTCCCGACCCTCTTCTTCTCCGTGTCGGAGCTTCCCATGACAGCAGCGGGAAAG ACGGATAGGAGGCGTCTCCGCGAGATGGGCGCCGCCGTCGCCGCCGCTCAGAGACAAGCCGTGGCGGAGCGGCAG CCGACTTCTTCGCCCGAGCTCAAACTTCAGCGTATCCTGGCTCGCGTCCTGGCCCTCGAACCCGCCTGCGTCGGG CTGCATGATTGCTTCTTTCGCCTCGGTGGTGACTCGCTCGGGGCCATAAAGGTCGTTGCCGCCGCTCGAGAGCAT GGTATCCGGCTGGTCGTCGCAGACTTGTATCGTCAGTCGCCGGCCAGCATCCAGAACCTGGCCCTTGTAGCATCC GTTCCGCGATCAAAGATGGCTAGAATCCATCTCATGGCCGAGATTGATCGTCACGACGCCATGCTCATCGCCTCT CCCCAGACTCTCCCCAACGACATGGTGAACGGTCACGATCCCTCCTCTCGCCATCCACTTACCGTCCTCGTCACC GGCGCCAACGGCTTCATCGGCACGCAGATCCTACGCCAGCTCCTCGACCACCGTCTCGTCAACCGCGTCATCGGC CTCGTCCGCGGCAGCACCGCCTCCGTAGCCTGGGAACGCACCGTCGACGCCGCCGTCCGGGCCGGCTGGTGGTCC GACGTCTACGCCGATAAGCTCGACGTTTGGGCCGGTGACCTGACGCTGCCCCGGCTGGGTCTCGACGTCAGCCGC TGGGAGACGTTGCTAATGACCGTCGACGTCGTCATCCACAACGGCGCGCGTGTCCACTTCGTCGCCGGCTATCGC GTTCTCGAGGCCGCCAACGTCGGCTCTACAATGGAGCTCCTGCGGTTCACGAACAAGACGAGGATCGTGTACGTG TCGACGGCTCGTCGTCGTGACCCGGCCGAGGAGAGCGACGAGGAGGTGGCCCTCGAGCTGGCCGGCAACGACGAC GTCACTGCCTACAGCCAAACCAAGTTCGTCGCCGAGGCCCTCGTCCGTCGAGTCGCAGTCCGCCGCCCTCCAGAC CGTCGACACGCCGTCGTCAGCCCGGGCTTCGTCATTGGAACCCCGACCGAGGGCGTGGCCAACGCCGATGACTTC CTTTGGCGGCTAGCAGCGGCTTGCATCAGAACGGGCGTATACGACGAGGAAGAAGCCTCAGCCTGGATTCCTCTA TCAGACGCGGCCACGGCAGCCGGAGCCATCGTCGACGCGGCCGTCAGCGAGGAGACGAGCTCGCTGGTGACGCAG GTCAAGGGCGGCATGACCCTATCCGACTTCTGGGCCGTCCTCATCGGCATGGGTTACCAGCTCAGACCGTCTCCG TCGCAGGACTGGCTGGCGTCCGTCAACAGCGACATGGAAGCTCGAGGCGACAATCATCCACTAAGACCATTGGCG CACCTCCTTCACGTCTCGAGGGCCGACGTCGAGTGGGCCGACAGCTGGAGGGAAGACAGCGTTGCGGCCGTGAGA TTGAGAGCGGCCGTGAGGAAGAGCGCCGAGTTTCTGGCCCGGGCTGGCTTCCTGCCTCGACCTGCGTCGACGGAG ACGGATGGGGATTCACGCACAACGGCTGGCGTGGCCTTTTCGAGGACTGGACGTTGA |
Transcript | >Ophcf2|05149 ATGATAACCCACCAGAACCTCTCCTCGGCCCTCCACCACCAAGCCCCCCTCCTCGCCTACACGCCCTCGACCCGC ATCCTCGACTTCTCCTCCTACAGCTTCGACGTCTCCATCGCCAACCTCTTCCGCGCCCTCTTCTGCGGCGGCTGC CTCTGCGTCCCCAGCGACGCAGATCGTCTCGACGACCTGGCCTCCACCATCAACCGTCTTCGCGCAAACGTCGCC CATCTGACGCCCTCGGTTGCCCGTCTTCTGCGCCCGGAGCGTGTGCCGGGGCTCAGCCGTCTGCATCTCGGAGGC GAGCCCGTCTGTCTCGCCGATGTAGAGCCCTGGTTCGAGACCGGCTCGGTCCGCGTCCTCGGTGGTTACGGACCC AGCGAGTGTACAGCCGCCAGCACCATCTGCCGTCCGCCCGCCAGTCCGGCCGATCTCGTGGCCTGCATCGGCTCC GGCGCCGGCCTCGTCACTTGGGTCGTCGATCCGGACGATCATCACCGTCTTCTGCCGCCGGGTTGCGTCGGCGAG CTTCTGCTGGAAGGGCCCCTCGTCGGAAGGGGATATCTAGCCGATCCGGTCAGGACCGAAGCCGTCTTCATCCGA AACCCGGTCTGGCTCTCCCGGCCGGCCCGCCTGTATAAGACGGGCGACCTCGTGCGTCAGACTCCAGACGGGTCC CTCCTGTTCGTCGGCCGAAACGACACCCAGGTCAAGATCCGCGGACAGAGAGTCGAGCTGACCGAGGTCGAGCTC CGCGTGCGGCAGCTGATGATGGCCGACGCTGGGAGGGGGCCCGTTGTCGCCGAGGTCGTCGTCCACGGCTGTCTG CCATCACTGGCCGTCTTCCTCCTTCTGAACAGCGACGAAAGCAGCAGTAGCAGCAATAGCAGCAATAGCAGCAAT AGCAGCAATAGCAGCAGCAAAAACCCCCACTGTGCCCTCCTCTCCGTCGCCACCGACGTCCGCGATGCCCTCGCC GCCCGTCTCCCAGCCTACATGGTCCCGACCCTCTTCTTCTCCGTGTCGGAGCTTCCCATGACAGCAGCGGGAAAG ACGGATAGGAGGCGTCTCCGCGAGATGGGCGCCGCCGTCGCCGCCGCTCAGAGACAAGCCGTGGCGGAGCGGCAG CCGACTTCTTCGCCCGAGCTCAAACTTCAGCGTATCCTGGCTCGCGTCCTGGCCCTCGAACCCGCCTGCGTCGGG CTGCATGATTGCTTCTTTCGCCTCGGTGGTGACTCGCTCGGGGCCATAAAGGTCGTTGCCGCCGCTCGAGAGCAT GGTATCCGGCTGGTCGTCGCAGACTTGTATCGTCAGTCGCCGGCCAGCATCCAGAACCTGGCCCTTGTAGCATCC GTTCCGCGATCAAAGATGGCTAGAATCCATCTCATGGCCGAGATTGATCGTCACGACGCCATGCTCATCGCCTCT CCCCAGACTCTCCCCAACGACATGGTGAACGGTCACGATCCCTCCTCTCGCCATCCACTTACCGTCCTCGTCACC GGCGCCAACGGCTTCATCGGCACGCAGATCCTACGCCAGCTCCTCGACCACCGTCTCGTCAACCGCGTCATCGGC CTCGTCCGCGGCAGCACCGCCTCCGTAGCCTGGGAACGCACCGTCGACGCCGCCGTCCGGGCCGGCTGGTGGTCC GACGTCTACGCCGATAAGCTCGACGTTTGGGCCGGTGACCTGACGCTGCCCCGGCTGGGTCTCGACGTCAGCCGC TGGGAGACGTTGCTAATGACCGTCGACGTCGTCATCCACAACGGCGCGCGTGTCCACTTCGTCGCCGGCTATCGC GTTCTCGAGGCCGCCAACGTCGGCTCTACAATGGAGCTCCTGCGGTTCACGAACAAGACGAGGATCGTGTACGTG TCGACGGCTCGTCGTCGTGACCCGGCCGAGGAGAGCGACGAGGAGGTGGCCCTCGAGCTGGCCGGCAACGACGAC GTCACTGCCTACAGCCAAACCAAGTTCGTCGCCGAGGCCCTCGTCCGTCGAGTCGCAGTCCGCCGCCCTCCAGAC CGTCGACACGCCGTCGTCAGCCCGGGCTTCGTCATTGGAACCCCGACCGAGGGCGTGGCCAACGCCGATGACTTC CTTTGGCGGCTAGCAGCGGCTTGCATCAGAACGGGCGTATACGACGAGGAAGAAGCCTCAGCCTGGATTCCTCTA TCAGACGCGGCCACGGCAGCCGGAGCCATCGTCGACGCGGCCGTCAGCGAGGAGACGAGCTCGCTGGTGACGCAG GTCAAGGGCGGCATGACCCTATCCGACTTCTGGGCCGTCCTCATCGGCATGGGTTACCAGCTCAGACCGTCTCCG TCGCAGGACTGGCTGGCGTCCGTCAACAGCGACATGGAAGCTCGAGGCGACAATCATCCACTAAGACCATTGGCG CACCTCCTTCACGTCTCGAGGGCCGACGTCGAGTGGGCCGACAGCTGGAGGGAAGACAGCGTTGCGGCCGTGAGA TTGAGAGCGGCCGTGAGGAAGAGCGCCGAGTTTCTGGCCCGGGCTGGCTTCCTGCCTCGACCTGCGTCGACGGAG ACGGATGGGGATTCACGCACAACGGCTGGCGTGGCCTTTTCGAGGACTGGACGTTGA |
Gene | >Ophcf2|05149 ATGATAACCCACCAGAACCTCTCCTCGGCCCTCCACCACCAAGCCCCCCTCCTCGCCTACACGCCCTCGACCCGC ATCCTCGACTTCTCCTCCTACAGCTTCGACGTCTCCATCGCCAACCTCTTCCGCGCCCTCTTCTGCGGCGGCTGC CTCTGCGTCCCCAGCGACGCAGATCGTCTCGACGACCTGGCCTCCACCATCAACCGTCTTCGCGCAAACGTCGCC CATCTGACGCCCTCGGTTGCCCGTCTTCTGCGCCCGGAGCGTGTGCCGGGGCTCAGCCGTCTGCATCTCGGAGGC GAGCCCGTCTGTCTCGCCGATGTAGAGCCCTGGTTCGAGACCGGCTCGGTCCGCGTCCTCGGTGGTTACGGACCC AGCGAGTGTACAGCCGCCAGCACCATCTGCCGTCCGCCCGCCAGTCCGGCCGATCTCGTGGCCTGCATCGGCTCC GGCGCCGGCCTCGTCACTTGGGTCGTCGATCCGGACGATCATCACCGTCTTCTGCCGCCGGGTTGCGTCGGCGAG CTTCTGCTGGAAGGGCCCCTCGTCGGAAGGGGATATCTAGCCGATCCGGTCAGGACCGAAGCCGTCTTCATCCGA AACCCGGTCTGGCTCTCCCGGCCGGCCCGCCTGTATAAGACGGGCGACCTCGTGCGTCAGACTCCAGACGGGTCC CTCCTGTTCGTCGGCCGAAACGACACCCAGGTCAAGATCCGCGGACAGAGAGTCGAGCTGACCGAGGTCGAGCTC CGCGTGCGGCAGCTGATGATGGCCGACGCTGGGAGGGGGCCCGTTGTCGCCGAGGTCGTCGTCCACGGCTGTCTG CCATCACTGGCCGTCTTCCTCCTTCTGAACAGCGACGAAAGCAGCAGTAGCAGCAATAGCAGCAATAGCAGCAAT AGCAGCAATAGCAGCAGCAAAAACCCCCACTGTGCCCTCCTCTCCGTCGCCACCGACGTCCGCGATGCCCTCGCC GCCCGTCTCCCAGCCTACATGGTCCCGACCCTCTTCTTCTCCGTGTCGGAGCTTCCCATGACAGCAGCGGGAAAG ACGGATAGGAGGCGTCTCCGCGAGATGGGCGCCGCCGTCGCCGCCGCTCAGAGACAAGCCGTGGCGGAGCGGCAG CCGACTTCTTCGCCCGAGCTCAAACTTCAGCGTATCCTGGCTCGCGTCCTGGCCCTCGAACCCGCCTGCGTCGGG CTGCATGATTGCTTCTTTCGCCTCGGTGGTGACTCGCTCGGGGCCATAAAGGTCGTTGCCGCCGCTCGAGAGCAT GGTATCCGGCTGGTCGTCGCAGACTTGTATCGTCAGTCGCCGGCCAGCATCCAGAACCTGGCCCTTGTAGCATCC GTTCCGCGATCAAAGATGGCTAGAATCCATCTCATGGCCGAGATTGATCGTCACGACGCCATGCTCATCGCCTCT CCCCAGACTCTCCCCAACGACATGGTGAACGGTCACGATCCCTCCTCTCGCCATCCACTTACCGTCCTCGTCACC GGCGCCAACGGCTTCATCGGCACGCAGATCCTACGCCAGCTCCTCGACCACCGTCTCGTCAACCGCGTCATCGGC CTCGTCCGCGGCAGCACCGCCTCCGTAGCCTGGGAACGCACCGTCGACGCCGCCGTCCGGGCCGGCTGGTGGTCC GACGTCTACGCCGATAAGCTCGACGTTTGGGCCGGTGACCTGACGCTGCCCCGGCTGGGTCTCGACGTCAGCCGC TGGGAGACGTTGCTAATGACCGTCGACGTCGTCATCCACAACGGCGCGCGTGTCCACTTCGTCGCCGGCTATCGC GTTCTCGAGGCCGCCAACGTCGGCTCTACAATGGAGCTCCTGCGGTTCACGAACAAGACGAGGATCGTGTACGTG TCGACGGCTCGTCGTCGTGACCCGGCCGAGGAGAGCGACGAGGAGGTGGCCCTCGAGCTGGCCGGCAACGACGAC GTCACTGCCTACAGCCAAACCAAGTTCGTCGCCGAGGCCCTCGTCCGTCGAGTCGCAGTCCGCCGCCCTCCAGAC CGTCGACACGCCGTCGTCAGCCCGGGCTTCGTCATTGGAACCCCGACCGAGGGCGTGGCCAACGCCGATGACTTC CTTTGGCGGCTAGCAGCGGCTTGCATCAGAACGGGCGTATACGACGAGGAAGAAGCCTCAGCCTGGATTCCTCTA TCAGACGCGGCCACGGCAGCCGGAGCCATCGTCGACGCGGCCGTCAGCGAGGAGACGAGCTCGCTGGTGACGCAG GTCAAGGGCGGCATGACCCTATCCGACTTCTGGGCCGTCCTCATCGGCATGGGTTACCAGCTCAGACCGTCTCCG TCGCAGGACTGGCTGGCGTCCGTCAACAGCGACATGGAAGCTCGAGGCGACAATCATCCACTAAGACCATTGGCG CACCTCCTTCACGTCTCGAGGGCCGACGTCGAGTGGGCCGACAGCTGGAGGGAAGACAGCGTTGCGGCCGTGAGA TTGAGAGCGGCCGTGAGGAAGAGCGCCGAGTTTCTGGCCCGGGCTGGCTTCCTGCCTCGACCTGCGTCGACGGAG ACGGATGGGGATTCACGCACAACGGCTGGCGTGGCCTTTTCGAGGACTGGACGTTGA |