Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05145
Gene name
Locationscaffold_05:2621408..2622434
Strand-
Gene length (bp)1026
Transcript length (bp)1026
Coding sequence length (bp)1026
Protein length (aa) 342

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 68 0.45

Transmembrane Domains

Domain # Start End Length
1 89 111 22
2 126 148 22
3 206 228 22
4 243 265 22
5 277 299 22
6 309 331 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05145
MNATATYRMSTIITERPSVPRRRTFQPVDWPASKQIWQVERNSLSLSSTYLASDFVADDDSDSEPVPPYGPREGI
KRMLTVFPVRDAAWITAVAFTVGSLSFTVASLVIILPIFFPPLAFDGQREVVFPAALTVGSASFFIGGNLATLGA
FNVDRGPISSDEEKSSSRPTANAYNPALLGSNEWVWFPGWTEFRSRYLKNPAFCGGLVAMFGGYVLSTSTITGFP
GVLDPEAADFPDQFNRLVMTPLIIGASLLGLGALILTLVIQQKWYMPAVTDIAWHSTFWNVAGAGWLAFSGVLTI
LGPEQELFAAIASTASSVLFVVASSLQWYLLMQHYPRRPSS*
Coding >Ophcf2|05145
ATGAATGCCACCGCAACTTACCGCATGTCCACCATTATCACCGAGCGGCCAAGCGTCCCCCGCCGAAGAACCTTC
CAGCCGGTAGACTGGCCGGCGTCGAAGCAGATCTGGCAGGTTGAGCGCAACTCTCTCTCGCTATCGAGCACCTAC
CTCGCATCAGACTTCGTCGCCGACGATGACTCGGATTCGGAGCCGGTGCCGCCGTACGGTCCGAGAGAGGGCATC
AAGCGTATGCTTACCGTCTTTCCTGTGAGGGACGCCGCGTGGATCACGGCCGTTGCCTTTACGGTTGGAAGTCTG
AGCTTCACCGTTGCTTCTCTCGTCATCATCTTGCCCATCTTCTTCCCGCCTCTGGCTTTCGACGGCCAGAGGGAG
GTCGTCTTCCCCGCTGCCTTGACCGTCGGTTCAGCCTCCTTTTTCATCGGTGGGAACCTGGCGACGCTGGGAGCC
TTCAACGTCGATCGCGGCCCGATATCCTCAGACGAAGAGAAGTCTTCATCGCGACCGACGGCCAACGCCTACAAC
CCGGCTCTCCTCGGCAGCAACGAATGGGTCTGGTTCCCCGGCTGGACCGAGTTCCGATCAAGATATCTCAAGAAC
CCGGCCTTCTGCGGCGGCCTGGTCGCCATGTTCGGCGGCTACGTCCTCTCCACCTCGACCATCACCGGCTTCCCC
GGCGTCCTCGACCCGGAAGCAGCCGACTTCCCCGACCAATTCAACCGCCTAGTGATGACGCCCCTCATCATCGGC
GCCTCACTCCTCGGCCTCGGCGCCCTGATACTCACCCTCGTCATCCAGCAGAAGTGGTACATGCCCGCCGTCACC
GACATCGCCTGGCACTCTACCTTTTGGAACGTGGCCGGCGCCGGCTGGTTGGCCTTTTCCGGCGTCCTCACCATT
CTCGGCCCTGAGCAGGAACTCTTCGCGGCCATCGCCAGTACGGCGAGCTCTGTGCTGTTTGTCGTTGCCTCGTCG
CTTCAGTGGTATCTGCTGATGCAGCATTATCCGCGTCGGCCATCGTCTTGA
Transcript >Ophcf2|05145
ATGAATGCCACCGCAACTTACCGCATGTCCACCATTATCACCGAGCGGCCAAGCGTCCCCCGCCGAAGAACCTTC
CAGCCGGTAGACTGGCCGGCGTCGAAGCAGATCTGGCAGGTTGAGCGCAACTCTCTCTCGCTATCGAGCACCTAC
CTCGCATCAGACTTCGTCGCCGACGATGACTCGGATTCGGAGCCGGTGCCGCCGTACGGTCCGAGAGAGGGCATC
AAGCGTATGCTTACCGTCTTTCCTGTGAGGGACGCCGCGTGGATCACGGCCGTTGCCTTTACGGTTGGAAGTCTG
AGCTTCACCGTTGCTTCTCTCGTCATCATCTTGCCCATCTTCTTCCCGCCTCTGGCTTTCGACGGCCAGAGGGAG
GTCGTCTTCCCCGCTGCCTTGACCGTCGGTTCAGCCTCCTTTTTCATCGGTGGGAACCTGGCGACGCTGGGAGCC
TTCAACGTCGATCGCGGCCCGATATCCTCAGACGAAGAGAAGTCTTCATCGCGACCGACGGCCAACGCCTACAAC
CCGGCTCTCCTCGGCAGCAACGAATGGGTCTGGTTCCCCGGCTGGACCGAGTTCCGATCAAGATATCTCAAGAAC
CCGGCCTTCTGCGGCGGCCTGGTCGCCATGTTCGGCGGCTACGTCCTCTCCACCTCGACCATCACCGGCTTCCCC
GGCGTCCTCGACCCGGAAGCAGCCGACTTCCCCGACCAATTCAACCGCCTAGTGATGACGCCCCTCATCATCGGC
GCCTCACTCCTCGGCCTCGGCGCCCTGATACTCACCCTCGTCATCCAGCAGAAGTGGTACATGCCCGCCGTCACC
GACATCGCCTGGCACTCTACCTTTTGGAACGTGGCCGGCGCCGGCTGGTTGGCCTTTTCCGGCGTCCTCACCATT
CTCGGCCCTGAGCAGGAACTCTTCGCGGCCATCGCCAGTACGGCGAGCTCTGTGCTGTTTGTCGTTGCCTCGTCG
CTTCAGTGGTATCTGCTGATGCAGCATTATCCGCGTCGGCCATCGTCTTGA
Gene >Ophcf2|05145
ATGAATGCCACCGCAACTTACCGCATGTCCACCATTATCACCGAGCGGCCAAGCGTCCCCCGCCGAAGAACCTTC
CAGCCGGTAGACTGGCCGGCGTCGAAGCAGATCTGGCAGGTTGAGCGCAACTCTCTCTCGCTATCGAGCACCTAC
CTCGCATCAGACTTCGTCGCCGACGATGACTCGGATTCGGAGCCGGTGCCGCCGTACGGTCCGAGAGAGGGCATC
AAGCGTATGCTTACCGTCTTTCCTGTGAGGGACGCCGCGTGGATCACGGCCGTTGCCTTTACGGTTGGAAGTCTG
AGCTTCACCGTTGCTTCTCTCGTCATCATCTTGCCCATCTTCTTCCCGCCTCTGGCTTTCGACGGCCAGAGGGAG
GTCGTCTTCCCCGCTGCCTTGACCGTCGGTTCAGCCTCCTTTTTCATCGGTGGGAACCTGGCGACGCTGGGAGCC
TTCAACGTCGATCGCGGCCCGATATCCTCAGACGAAGAGAAGTCTTCATCGCGACCGACGGCCAACGCCTACAAC
CCGGCTCTCCTCGGCAGCAACGAATGGGTCTGGTTCCCCGGCTGGACCGAGTTCCGATCAAGATATCTCAAGAAC
CCGGCCTTCTGCGGCGGCCTGGTCGCCATGTTCGGCGGCTACGTCCTCTCCACCTCGACCATCACCGGCTTCCCC
GGCGTCCTCGACCCGGAAGCAGCCGACTTCCCCGACCAATTCAACCGCCTAGTGATGACGCCCCTCATCATCGGC
GCCTCACTCCTCGGCCTCGGCGCCCTGATACTCACCCTCGTCATCCAGCAGAAGTGGTACATGCCCGCCGTCACC
GACATCGCCTGGCACTCTACCTTTTGGAACGTGGCCGGCGCCGGCTGGTTGGCCTTTTCCGGCGTCCTCACCATT
CTCGGCCCTGAGCAGGAACTCTTCGCGGCCATCGCCAGTACGGCGAGCTCTGTGCTGTTTGTCGTTGCCTCGTCG
CTTCAGTGGTATCTGCTGATGCAGCATTATCCGCGTCGGCCATCGTCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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