Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05060
Gene name
Locationscaffold_05:2390420..2391661
Strand+
Gene length (bp)1241
Transcript length (bp)804
Coding sequence length (bp)804
Protein length (aa) 268

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04511 DER1 Der1-like family 2.9E-22 12 200

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 55 77 22
3 97 119 22
4 145 167 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05060
MADQWVEAYWRLPSVSRTMATAAFLTSVGVYTSLIPGYWIVFHPQFLWRFPPQIWRFFTAFLLTGPELSMLFDTY
FVYSYLSQLEAGNPRFSRKEDLLWYLTFCGGTIMMMNYVSGLGFTTFLQALNLAMCYTVTQDQRGMKANLMFVTI
PAPMTPFAMLAFNLLFPNGVRSMLLQLLGLLSAHLFDFLTRIWPEVKGGDLGCSAKWRLKRAFAGFLEDSGARPK
VGMRRWLVWNFYAWRLAPTCIVSWSHDTVKESGNGILQWSLF*
Coding >Ophcf2|05060
ATGGCAGATCAGTGGGTGGAAGCCTACTGGCGGCTGCCCTCGGTGTCGAGAACAATGGCGACTGCCGCGTTCCTC
ACCTCCGTCGGCGTCTATACTAGTCTCATCCCCGGGTACTGGATCGTCTTCCACCCTCAGTTTCTGTGGCGTTTC
CCTCCACAGATCTGGCGCTTCTTCACCGCTTTCCTCCTCACCGGACCCGAGTTGAGCATGCTGTTTGACACGTAC
TTTGTCTACTCGTACCTCAGTCAGCTCGAGGCCGGGAACCCGCGCTTTTCTCGCAAAGAGGACCTGCTTTGGTAT
CTGACGTTTTGCGGTGGTACCATCATGATGATGAACTATGTCAGCGGCCTCGGGTTCACCACGTTTCTCCAGGCG
CTCAACTTGGCCATGTGCTACACCGTGACTCAGGATCAGCGTGGCATGAAGGCGAACCTCATGTTCGTCACTATT
CCCGCTCCCATGACCCCTTTCGCCATGCTTGCCTTCAACCTGCTATTCCCCAATGGTGTTCGGAGCATGCTGCTA
CAACTCCTGGGCTTGCTCTCCGCGCATCTCTTTGACTTCTTGACTCGCATCTGGCCCGAAGTCAAGGGCGGCGAC
CTCGGCTGCAGCGCCAAGTGGAGGCTCAAGAGGGCCTTTGCCGGATTCTTGGAGGACTCGGGGGCCCGGCCAAAG
GTTGGGATGAGGCGCTGGCTGGTCTGGAACTTTTACGCGTGGCGACTCGCACCTACCTGTATTGTTTCGTGGAGT
CACGACACTGTCAAGGAAAGCGGTAACGGGATTCTACAATGGAGTTTGTTCTGA
Transcript >Ophcf2|05060
ATGGCAGATCAGTGGGTGGAAGCCTACTGGCGGCTGCCCTCGGTGTCGAGAACAATGGCGACTGCCGCGTTCCTC
ACCTCCGTCGGCGTCTATACTAGTCTCATCCCCGGGTACTGGATCGTCTTCCACCCTCAGTTTCTGTGGCGTTTC
CCTCCACAGATCTGGCGCTTCTTCACCGCTTTCCTCCTCACCGGACCCGAGTTGAGCATGCTGTTTGACACGTAC
TTTGTCTACTCGTACCTCAGTCAGCTCGAGGCCGGGAACCCGCGCTTTTCTCGCAAAGAGGACCTGCTTTGGTAT
CTGACGTTTTGCGGTGGTACCATCATGATGATGAACTATGTCAGCGGCCTCGGGTTCACCACGTTTCTCCAGGCG
CTCAACTTGGCCATGTGCTACACCGTGACTCAGGATCAGCGTGGCATGAAGGCGAACCTCATGTTCGTCACTATT
CCCGCTCCCATGACCCCTTTCGCCATGCTTGCCTTCAACCTGCTATTCCCCAATGGTGTTCGGAGCATGCTGCTA
CAACTCCTGGGCTTGCTCTCCGCGCATCTCTTTGACTTCTTGACTCGCATCTGGCCCGAAGTCAAGGGCGGCGAC
CTCGGCTGCAGCGCCAAGTGGAGGCTCAAGAGGGCCTTTGCCGGATTCTTGGAGGACTCGGGGGCCCGGCCAAAG
GTTGGGATGAGGCGCTGGCTGGTCTGGAACTTTTACGCGTGGCGACTCGCACCTACCTGTATTGTTTCGTGGAGT
CACGACACTGTCAAGGAAAGCGGTAACGGGATTCTACAATGGAGTTTGTTCTGA
Gene >Ophcf2|05060
ATGGCAGATCAGTGGGTGGAAGCCTACTGGCGGCTGCCCTCGGTGTCGAGGCAAGCTCGTTCTCTCTCTCCAAGC
GCGAGAGATTCTTCAGCTAAAATCGAGTCTGCAGAACAATGGCGACTGCCGCGTTCCTCACCTCCGTCGGCGTCT
ATACTAGTCTCATCCCCGGGTACTGGATCGTCTTCCACCCTCAGTTTCTGTGGCGTTTCCCTCCACAGATCTGGC
GCTTCTTCACCGCTTTCCTCCTCACCGGACCCGAGTTGAGCATGCTGTTTGACACGTACTTTGTCTACTCGTACC
TCAGTCAGCTCGAGGCCGGGAACCCGCGCTTTTCTCGCAAAGAGGACCTGCTTTGGTATCTGACGTTTTGCGGTG
GTACCATCATGGTAAGCTAGCTGCTTCTCTTCACCGACACGAGTTTCGCAACTCGCATTCGCCCCTCATATATCT
GCCCGGATAGTGTCGTATCTACTGCTATCACGGTTCCTGGAAATGAGGAAGATGACCCCTGTGCTTCGGGCTGGC
CCATCATTCGCAATCCGGGCCGGCCTGCGGTGCCGGTATGGTGGGATGTCTTATGGATGACCCGTCTGATGACCT
GTTCATTCGGGCGGTTCTATAGATCCCTACATTCTCTTGCTCCTGACGCGCGCGCATGCTGCTCACGTTGCAAGA
CGGCAGAGGCTGACGACTCCCCAGATGATGAACTATGTCAGCGGCCTCGGGTTCACCACGTTTCTCCAGGCGCTC
AACTTGGCCATGTGCTACACCGTGACTCAGGATCAGCGTGGCATGAAGGCGAACCTCATGTTCGTCACTATTCCC
GCTCCCATGACCCCTTTCGCCATGCTTGCCTTCAACCTGCTATTCCCCAATGGTGTTCGGAGCATGCTGCTACAA
CTCCTGGGCTTGCTCTCCGCGCATCTCTTTGACTTCTTGACTCGCATCTGGCCCGAGTATGGGGGTGGTAGAAAC
CTGATTTCTACGCCGGCCTTTTTCTCTACGGCGGTCCGATCTTTAGAGTCAAGGGCGGCGACCTCGGCTGCAGCG
CCAAGTGGAGGCTCAAGAGGGCCTTTGCCGGATTCTTGGAGGACTCGGGGGCCCGGCCAAAGGTTGGGATGAGGC
GCTGGCTGGTCTGGAACTTTTACGCGTGGCGACTCGCACCTACCTGTATTGTTTCGTGGAGTCACGACACTGTCA
AGGAAAGCGGTAACGGGATTCTACAATGGAGTTTGTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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