Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|05048
Gene name
Locationscaffold_05:2367052..2368198
Strand-
Gene length (bp)1146
Transcript length (bp)1146
Coding sequence length (bp)1146
Protein length (aa) 382

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 32 0.45

Transmembrane Domains

Domain # Start End Length
1 10 27 17
2 145 167 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|05048
MLLPRDSPSAFASTLTTTIIVVSSFGSRTMAQQMASSDPPPARTPQGKAPSPTPDQTTPAPTPTSEDATTTTTTT
TPSSTPDATSDSGLTANPTITRGPQATAGGELSGLPTLTRNIIPTYPPPAVPPTRDAPFMRHSTLPEGTVFIAVG
AFLGLLGLAILVYRAIVSLLLHRSVKRAAMAQHMSNSKAGFPAPPAPFYKYTDQESTMSLSAAGRGARRAARGPV
SSANPSHSNLFFSPTAVNANAGSRASSLLPSGFYGAGTAPGSSAAIHANSISLHNLRPDSRGHYTNGSRHTLTGT
PPDSPQYHPRRDAAAAAAASASSLHINPGSSSARRAPSAYLEDLLADDAVSLPPPPPPMQPSELPGSSVYGERTD
GGHSRI*
Coding >Ophcf2|05048
ATGTTGCTCCCGCGCGACTCACCCTCGGCTTTTGCCTCGACTCTCACCACCACCATCATCGTCGTCTCTTCCTTC
GGCTCTCGAACCATGGCTCAGCAAATGGCCAGTTCCGATCCACCGCCAGCCCGCACTCCGCAAGGCAAGGCGCCC
TCTCCGACGCCAGACCAGACGACGCCCGCGCCTACGCCTACCTCGGAAGATGCGACGACGACGACGACGACGACG
ACGCCCTCGTCTACCCCCGACGCGACTTCAGATTCCGGTCTGACGGCCAACCCTACCATCACCAGAGGTCCACAG
GCAACGGCTGGTGGCGAGCTCAGCGGCCTCCCTACTCTCACGAGAAACATCATCCCGACTTATCCCCCTCCAGCC
GTGCCTCCCACCCGCGACGCCCCCTTCATGCGCCATTCAACCCTTCCAGAAGGCACCGTCTTCATCGCCGTCGGT
GCTTTCCTCGGCCTCCTCGGTCTCGCCATCCTCGTTTATCGCGCCATTGTCAGTCTCCTCCTCCACCGCTCCGTC
AAGCGCGCCGCCATGGCCCAGCACATGTCCAACTCCAAGGCTGGCTTCCCCGCGCCCCCGGCCCCTTTCTACAAG
TACACCGATCAGGAGTCCACCATGTCGCTCTCCGCCGCCGGACGCGGAGCCCGAAGAGCCGCTCGAGGACCCGTC
TCCTCCGCCAACCCAAGCCACTCCAACCTCTTCTTCTCCCCCACTGCCGTCAACGCCAACGCCGGCTCCCGCGCC
TCTTCACTCCTGCCCTCGGGCTTCTACGGCGCAGGCACGGCCCCTGGCTCCTCGGCCGCCATCCACGCAAACTCC
ATCAGCCTGCACAACCTCCGGCCCGACTCGCGCGGCCACTACACCAACGGCTCCCGTCACACCCTCACCGGCACA
CCGCCCGACTCGCCCCAGTATCACCCCCGGAGAGACGCCGCCGCCGCCGCCGCCGCCAGCGCATCCTCCTTGCAC
ATCAACCCGGGCTCCTCGTCGGCCAGGCGAGCTCCCAGCGCCTATCTCGAGGACCTACTGGCCGACGACGCCGTC
TCCCTGCCGCCGCCGCCGCCGCCCATGCAGCCGTCAGAGCTTCCGGGCAGCTCCGTCTACGGCGAGAGGACCGAC
GGCGGCCACAGCCGCATCTGA
Transcript >Ophcf2|05048
ATGTTGCTCCCGCGCGACTCACCCTCGGCTTTTGCCTCGACTCTCACCACCACCATCATCGTCGTCTCTTCCTTC
GGCTCTCGAACCATGGCTCAGCAAATGGCCAGTTCCGATCCACCGCCAGCCCGCACTCCGCAAGGCAAGGCGCCC
TCTCCGACGCCAGACCAGACGACGCCCGCGCCTACGCCTACCTCGGAAGATGCGACGACGACGACGACGACGACG
ACGCCCTCGTCTACCCCCGACGCGACTTCAGATTCCGGTCTGACGGCCAACCCTACCATCACCAGAGGTCCACAG
GCAACGGCTGGTGGCGAGCTCAGCGGCCTCCCTACTCTCACGAGAAACATCATCCCGACTTATCCCCCTCCAGCC
GTGCCTCCCACCCGCGACGCCCCCTTCATGCGCCATTCAACCCTTCCAGAAGGCACCGTCTTCATCGCCGTCGGT
GCTTTCCTCGGCCTCCTCGGTCTCGCCATCCTCGTTTATCGCGCCATTGTCAGTCTCCTCCTCCACCGCTCCGTC
AAGCGCGCCGCCATGGCCCAGCACATGTCCAACTCCAAGGCTGGCTTCCCCGCGCCCCCGGCCCCTTTCTACAAG
TACACCGATCAGGAGTCCACCATGTCGCTCTCCGCCGCCGGACGCGGAGCCCGAAGAGCCGCTCGAGGACCCGTC
TCCTCCGCCAACCCAAGCCACTCCAACCTCTTCTTCTCCCCCACTGCCGTCAACGCCAACGCCGGCTCCCGCGCC
TCTTCACTCCTGCCCTCGGGCTTCTACGGCGCAGGCACGGCCCCTGGCTCCTCGGCCGCCATCCACGCAAACTCC
ATCAGCCTGCACAACCTCCGGCCCGACTCGCGCGGCCACTACACCAACGGCTCCCGTCACACCCTCACCGGCACA
CCGCCCGACTCGCCCCAGTATCACCCCCGGAGAGACGCCGCCGCCGCCGCCGCCGCCAGCGCATCCTCCTTGCAC
ATCAACCCGGGCTCCTCGTCGGCCAGGCGAGCTCCCAGCGCCTATCTCGAGGACCTACTGGCCGACGACGCCGTC
TCCCTGCCGCCGCCGCCGCCGCCCATGCAGCCGTCAGAGCTTCCGGGCAGCTCCGTCTACGGCGAGAGGACCGAC
GGCGGCCACAGCCGCATCTGA
Gene >Ophcf2|05048
ATGTTGCTCCCGCGCGACTCACCCTCGGCTTTTGCCTCGACTCTCACCACCACCATCATCGTCGTCTCTTCCTTC
GGCTCTCGAACCATGGCTCAGCAAATGGCCAGTTCCGATCCACCGCCAGCCCGCACTCCGCAAGGCAAGGCGCCC
TCTCCGACGCCAGACCAGACGACGCCCGCGCCTACGCCTACCTCGGAAGATGCGACGACGACGACGACGACGACG
ACGCCCTCGTCTACCCCCGACGCGACTTCAGATTCCGGTCTGACGGCCAACCCTACCATCACCAGAGGTCCACAG
GCAACGGCTGGTGGCGAGCTCAGCGGCCTCCCTACTCTCACGAGAAACATCATCCCGACTTATCCCCCTCCAGCC
GTGCCTCCCACCCGCGACGCCCCCTTCATGCGCCATTCAACCCTTCCAGAAGGCACCGTCTTCATCGCCGTCGGT
GCTTTCCTCGGCCTCCTCGGTCTCGCCATCCTCGTTTATCGCGCCATTGTCAGTCTCCTCCTCCACCGCTCCGTC
AAGCGCGCCGCCATGGCCCAGCACATGTCCAACTCCAAGGCTGGCTTCCCCGCGCCCCCGGCCCCTTTCTACAAG
TACACCGATCAGGAGTCCACCATGTCGCTCTCCGCCGCCGGACGCGGAGCCCGAAGAGCCGCTCGAGGACCCGTC
TCCTCCGCCAACCCAAGCCACTCCAACCTCTTCTTCTCCCCCACTGCCGTCAACGCCAACGCCGGCTCCCGCGCC
TCTTCACTCCTGCCCTCGGGCTTCTACGGCGCAGGCACGGCCCCTGGCTCCTCGGCCGCCATCCACGCAAACTCC
ATCAGCCTGCACAACCTCCGGCCCGACTCGCGCGGCCACTACACCAACGGCTCCCGTCACACCCTCACCGGCACA
CCGCCCGACTCGCCCCAGTATCACCCCCGGAGAGACGCCGCCGCCGCCGCCGCCGCCAGCGCATCCTCCTTGCAC
ATCAACCCGGGCTCCTCGTCGGCCAGGCGAGCTCCCAGCGCCTATCTCGAGGACCTACTGGCCGACGACGCCGTC
TCCCTGCCGCCGCCGCCGCCGCCCATGCAGCCGTCAGAGCTTCCGGGCAGCTCCGTCTACGGCGAGAGGACCGAC
GGCGGCCACAGCCGCATCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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