Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04993
Gene name
Locationscaffold_05:2218263..2219915
Strand+
Gene length (bp)1652
Transcript length (bp)1530
Coding sequence length (bp)1530
Protein length (aa) 510

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04882 Peroxin-3 Peroxin-3 1.0E-160 7 456

GO

GO Term Description Terminal node
GO:0005779 integral component of peroxisomal membrane Yes
GO:0007031 peroxisome organization Yes
GO:0005575 cellular_component No
GO:0071840 cellular component organization or biogenesis No
GO:0031231 intrinsic component of peroxisomal membrane No
GO:0008150 biological_process No
GO:0031224 intrinsic component of membrane No
GO:0031300 intrinsic component of organelle membrane No
GO:0006996 organelle organization No
GO:0009987 cellular process No
GO:0016021 integral component of membrane No
GO:0016043 cellular component organization No
GO:0031301 integral component of organelle membrane No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.5

Transmembrane Domains

Domain # Start End Length
1 15 34 19
2 179 201 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04993
MFSAARRWLRNNRTPLAVGIGVIGAGYLAAQYIVAKISDARERMSSERIAKDNLRRRFEQNQEDCTFTVLALLPT
ATANVLSVLNTEKITYEIQQTKTSARGAKSDSANPPSIADTTLTEDDGKSMASMHSESGIHVSQIATSTSSPSPS
PFAVSTDSSAHDGRAPKTRKTKRQLWDDLAISAATRAFTLVYTLALLVMLTRIQLNLLGRRSYLSSVVSLAAGAQ
HTPISLENKDDDKTDEYGCDFDTNRKYLTFSWWLLNRGWVELMHRVESAVRTVFGGLSPRDLVTFQRYCELTMEV
RKLVEGATPEERRNSDWLRFVLPRPELEAEVIRESGILDDNASQGGDSQPSSPALRRLLDETADIVESPAFVHVL
TLVLDSAFSLLVDNKLAVEAYETADEQAREQLRSKAVLLPKILSVLTRQAHVIGNGMPNEYLQEMETVRELESFA
AVVYSSNWENEMRDEDVEDVAAKLRSAIRGQSGHGEESLVMVDPESSFESAWERALDKR*
Coding >Ophcf2|04993
ATGTTCTCCGCGGCTCGCCGCTGGTTGCGGAATAACCGGACGCCACTTGCCGTCGGCATCGGAGTCATCGGCGCC
GGTTATCTCGCGGCGCAATATATCGTTGCCAAGATCAGTGACGCTCGCGAGCGTATGAGCAGCGAGCGCATCGCC
AAGGACAATCTGCGACGCCGCTTTGAGCAGAATCAGGAGGACTGCACCTTTACCGTTCTAGCTCTCCTTCCCACC
GCCACCGCCAATGTTCTGTCGGTCCTCAACACGGAGAAAATCACCTACGAGATTCAGCAGACGAAGACTTCGGCT
AGAGGTGCAAAGTCCGACTCGGCTAATCCTCCGAGCATCGCCGATACCACATTGACCGAGGATGACGGCAAGAGC
ATGGCCAGCATGCACAGCGAGAGTGGCATCCATGTGAGCCAGATTGCCACATCCACCTCCTCGCCCTCGCCCTCG
CCCTTTGCTGTGTCTACCGACTCGTCAGCCCACGACGGCCGTGCCCCCAAAACGCGCAAGACAAAGAGACAGCTC
TGGGATGACCTGGCCATCAGTGCCGCCACCAGAGCATTCACTCTCGTATACACGCTCGCACTCCTCGTCATGTTG
ACGCGCATCCAGCTTAACCTCCTCGGCCGGCGGAGCTACCTCTCCAGCGTCGTGTCGCTCGCCGCCGGCGCTCAG
CACACCCCCATCAGCCTCGAGAACAAGGACGACGACAAGACGGACGAGTACGGCTGCGACTTCGACACCAATCGC
AAGTACCTGACCTTTAGCTGGTGGCTCCTCAACAGGGGCTGGGTCGAGTTGATGCACCGCGTCGAAAGCGCCGTC
CGCACCGTCTTCGGCGGCCTGAGCCCGCGCGACCTCGTCACCTTTCAGAGATACTGCGAGCTGACAATGGAAGTT
CGGAAGTTGGTCGAGGGCGCCACGCCCGAGGAGCGCCGAAACTCGGACTGGCTCAGGTTCGTGCTGCCCAGGCCG
GAGCTCGAGGCCGAGGTGATTCGCGAATCCGGCATCCTCGACGACAACGCCTCACAGGGCGGCGATTCTCAGCCT
TCATCACCGGCCCTTCGCCGGCTTCTCGACGAGACTGCCGACATCGTCGAGTCGCCGGCCTTTGTTCACGTTCTC
ACGCTCGTTCTCGATTCCGCCTTTTCCCTGCTCGTCGACAACAAGCTCGCAGTCGAAGCATATGAGACAGCAGAT
GAGCAAGCTCGCGAACAACTTCGTTCCAAAGCCGTTCTTTTACCAAAGATACTCTCCGTTCTGACGCGCCAAGCC
CACGTCATTGGGAATGGCATGCCCAACGAGTACCTTCAGGAGATGGAGACGGTTCGCGAACTCGAGTCCTTTGCC
GCCGTAGTATACTCGAGTAATTGGGAGAACGAGATGCGGGACGAGGACGTCGAAGACGTGGCGGCCAAGTTGCGA
TCGGCAATTCGCGGACAGAGTGGCCATGGCGAGGAGAGCCTCGTCATGGTGGATCCCGAAAGCAGCTTCGAGAGC
GCATGGGAGAGAGCCTTGGACAAGAGGTGA
Transcript >Ophcf2|04993
ATGTTCTCCGCGGCTCGCCGCTGGTTGCGGAATAACCGGACGCCACTTGCCGTCGGCATCGGAGTCATCGGCGCC
GGTTATCTCGCGGCGCAATATATCGTTGCCAAGATCAGTGACGCTCGCGAGCGTATGAGCAGCGAGCGCATCGCC
AAGGACAATCTGCGACGCCGCTTTGAGCAGAATCAGGAGGACTGCACCTTTACCGTTCTAGCTCTCCTTCCCACC
GCCACCGCCAATGTTCTGTCGGTCCTCAACACGGAGAAAATCACCTACGAGATTCAGCAGACGAAGACTTCGGCT
AGAGGTGCAAAGTCCGACTCGGCTAATCCTCCGAGCATCGCCGATACCACATTGACCGAGGATGACGGCAAGAGC
ATGGCCAGCATGCACAGCGAGAGTGGCATCCATGTGAGCCAGATTGCCACATCCACCTCCTCGCCCTCGCCCTCG
CCCTTTGCTGTGTCTACCGACTCGTCAGCCCACGACGGCCGTGCCCCCAAAACGCGCAAGACAAAGAGACAGCTC
TGGGATGACCTGGCCATCAGTGCCGCCACCAGAGCATTCACTCTCGTATACACGCTCGCACTCCTCGTCATGTTG
ACGCGCATCCAGCTTAACCTCCTCGGCCGGCGGAGCTACCTCTCCAGCGTCGTGTCGCTCGCCGCCGGCGCTCAG
CACACCCCCATCAGCCTCGAGAACAAGGACGACGACAAGACGGACGAGTACGGCTGCGACTTCGACACCAATCGC
AAGTACCTGACCTTTAGCTGGTGGCTCCTCAACAGGGGCTGGGTCGAGTTGATGCACCGCGTCGAAAGCGCCGTC
CGCACCGTCTTCGGCGGCCTGAGCCCGCGCGACCTCGTCACCTTTCAGAGATACTGCGAGCTGACAATGGAAGTT
CGGAAGTTGGTCGAGGGCGCCACGCCCGAGGAGCGCCGAAACTCGGACTGGCTCAGGTTCGTGCTGCCCAGGCCG
GAGCTCGAGGCCGAGGTGATTCGCGAATCCGGCATCCTCGACGACAACGCCTCACAGGGCGGCGATTCTCAGCCT
TCATCACCGGCCCTTCGCCGGCTTCTCGACGAGACTGCCGACATCGTCGAGTCGCCGGCCTTTGTTCACGTTCTC
ACGCTCGTTCTCGATTCCGCCTTTTCCCTGCTCGTCGACAACAAGCTCGCAGTCGAAGCATATGAGACAGCAGAT
GAGCAAGCTCGCGAACAACTTCGTTCCAAAGCCGTTCTTTTACCAAAGATACTCTCCGTTCTGACGCGCCAAGCC
CACGTCATTGGGAATGGCATGCCCAACGAGTACCTTCAGGAGATGGAGACGGTTCGCGAACTCGAGTCCTTTGCC
GCCGTAGTATACTCGAGTAATTGGGAGAACGAGATGCGGGACGAGGACGTCGAAGACGTGGCGGCCAAGTTGCGA
TCGGCAATTCGCGGACAGAGTGGCCATGGCGAGGAGAGCCTCGTCATGGTGGATCCCGAAAGCAGCTTCGAGAGC
GCATGGGAGAGAGCCTTGGACAAGAGGTGA
Gene >Ophcf2|04993
ATGTTCTCCGCGGCTCGCCGCTGGTTGCGGAATAACCGGACGCCACTTGCCGTCGGCATCGGAGTCATCGGCGCC
GGTTATCTCGCGGCGCAATATATCGTTGCCAAGATCAGTGACGCTCGCGAGCGTATGAGCAGCGAGCGCATCGCC
AAGGACAAGTTGGTCCGCTTCAATAAAAACTGTATTTCGTCGCTTCTAATCGTTCTGGAAGTCTGCGACGCCGCT
TTGAGCAGAATCAGGAGGACTGCACCTTTACCGTTCTAGCTCTCCTTCCCACCGCCACCGCCAATGTTCTGTCGG
TCCTCAACACGGAGAAAATCACCTACGAGATTCAGCAGACGAAGACTTCGGCTAGAGGTGCAAAGTCCGACTCGG
CTAATCCTCCGAGCATCGCCGATACCACATTGACCGAGGATGACGGCAAGAGCATGGCCAGCATGCACAGCGAGA
GTGGCATCCATGTGAGCCAGATTGCCACATCCACCTCCTCGCCCTCGCCCTCGCCCTTTGCTGTGTCTACCGACT
CGTCAGCCCACGACGGCCGTGCCCCCAAAACGCGCAAGACAAAGAGACAGCTCTGGGATGACCTGGCCATCAGTG
GTTCGTCGCTTCTGAACCTCTCTACCACCGTCTATGGCAATCGAGCTGATAGATGTACACCGTCGACAGCCGCCA
CCAGAGCATTCACTCTCGTATACACGCTCGCACTCCTCGTCATGTTGACGCGCATCCAGCTTAACCTCCTCGGCC
GGCGGAGCTACCTCTCCAGCGTCGTGTCGCTCGCCGCCGGCGCTCAGCACACCCCCATCAGCCTCGAGAACAAGG
ACGACGACAAGACGGACGAGTACGGCTGCGACTTCGACACCAATCGCAAGTACCTGACCTTTAGCTGGTGGCTCC
TCAACAGGGGCTGGGTCGAGTTGATGCACCGCGTCGAAAGCGCCGTCCGCACCGTCTTCGGCGGCCTGAGCCCGC
GCGACCTCGTCACCTTTCAGAGATACTGCGAGCTGACAATGGAAGTTCGGAAGTTGGTCGAGGGCGCCACGCCCG
AGGAGCGCCGAAACTCGGACTGGCTCAGGTTCGTGCTGCCCAGGCCGGAGCTCGAGGCCGAGGTGATTCGCGAAT
CCGGCATCCTCGACGACAACGCCTCACAGGGCGGCGATTCTCAGCCTTCATCACCGGCCCTTCGCCGGCTTCTCG
ACGAGACTGCCGACATCGTCGAGTCGCCGGCCTTTGTTCACGTTCTCACGCTCGTTCTCGATTCCGCCTTTTCCC
TGCTCGTCGACAACAAGCTCGCAGTCGAAGCATATGAGACAGCAGATGAGCAAGCTCGCGAACAACTTCGTTCCA
AAGCCGTTCTTTTACCAAAGATACTCTCCGTTCTGACGCGCCAAGCCCACGTCATTGGGAATGGCATGCCCAACG
AGTACCTTCAGGAGATGGAGACGGTTCGCGAACTCGAGTCCTTTGCCGCCGTAGTATACTCGAGTAATTGGGAGA
ACGAGATGCGGGACGAGGACGTCGAAGACGTGGCGGCCAAGTTGCGATCGGCAATTCGCGGACAGAGTGGCCATG
GCGAGGAGAGCCTCGTCATGGTGGATCCCGAAAGCAGCTTCGAGAGCGCATGGGAGAGAGCCTTGGACAAGAGGT
GA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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