Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04988
Gene name
Locationscaffold_05:2208884..2209829
Strand-
Gene length (bp)945
Transcript length (bp)609
Coding sequence length (bp)609
Protein length (aa) 203

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.5

Transmembrane Domains

Domain # Start End Length
1 5 27 22
2 40 62 22
3 75 97 22
4 123 145 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04988
MFFNPGIVYMLASVSLSAIAVVVHFHISHLSLPFPPPLTMATTMLPLAAFLNAYVYPNLLLASSTSTHRLSPTRL
APLVLQATQALVTAVLATALLLRGLVPSSAVVEALLEGRQPWAKAMKATSALDLAVVLAVGLMQLLGLLLMRERT
VWWTALRTQDWKADDEGRLLASAVDEDGRGVTVRCRGGRGLVLRGGGLLRAR*
Coding >Ophcf2|04988
ATGTTCTTCAACCCGGGCATCGTCTACATGCTTGCCAGCGTCTCCCTCTCCGCCATCGCAGTCGTCGTCCACTTC
CACATCTCGCACCTCTCCCTCCCCTTCCCGCCCCCCCTAACCATGGCAACAACGATGCTCCCCCTGGCCGCCTTC
CTGAACGCCTACGTCTACCCCAACCTCCTCCTCGCATCCTCCACCAGCACGCACCGCCTCTCGCCCACCCGTCTG
GCCCCGCTGGTGCTGCAGGCCACGCAGGCTCTCGTCACGGCTGTGCTGGCAACGGCCTTGCTCCTACGCGGCCTG
GTGCCTTCCTCTGCTGTTGTCGAGGCGTTGCTCGAGGGCCGGCAGCCGTGGGCCAAGGCTATGAAGGCCACCTCC
GCGCTGGACCTTGCCGTTGTTCTCGCCGTGGGCTTGATGCAGCTCCTCGGCCTGCTGCTCATGAGGGAGCGGACT
GTCTGGTGGACAGCCCTCCGCACACAGGACTGGAAAGCCGACGACGAGGGACGTCTGCTTGCTTCCGCGGTGGAC
GAGGATGGGAGGGGGGTTACAGTGCGGTGTCGCGGGGGGAGGGGGCTGGTGCTGAGGGGAGGCGGGTTGTTGCGT
GCTAGATAG
Transcript >Ophcf2|04988
ATGTTCTTCAACCCGGGCATCGTCTACATGCTTGCCAGCGTCTCCCTCTCCGCCATCGCAGTCGTCGTCCACTTC
CACATCTCGCACCTCTCCCTCCCCTTCCCGCCCCCCCTAACCATGGCAACAACGATGCTCCCCCTGGCCGCCTTC
CTGAACGCCTACGTCTACCCCAACCTCCTCCTCGCATCCTCCACCAGCACGCACCGCCTCTCGCCCACCCGTCTG
GCCCCGCTGGTGCTGCAGGCCACGCAGGCTCTCGTCACGGCTGTGCTGGCAACGGCCTTGCTCCTACGCGGCCTG
GTGCCTTCCTCTGCTGTTGTCGAGGCGTTGCTCGAGGGCCGGCAGCCGTGGGCCAAGGCTATGAAGGCCACCTCC
GCGCTGGACCTTGCCGTTGTTCTCGCCGTGGGCTTGATGCAGCTCCTCGGCCTGCTGCTCATGAGGGAGCGGACT
GTCTGGTGGACAGCCCTCCGCACACAGGACTGGAAAGCCGACGACGAGGGACGTCTGCTTGCTTCCGCGGTGGAC
GAGGATGGGAGGGGGGTTACAGTGCGGTGTCGCGGGGGGAGGGGGCTGGTGCTGAGGGGAGGCGGGTTGTTGCGT
GCTAGATAG
Gene >Ophcf2|04988
ATGTTCTTCAACCCGGGCATCGTCTACATGCTTGTACGAAGACTCAACTTCCCCTCGCCATCATCATCCAGACAC
TGACAACCCCAGGCCAGCGTCTCCCTCTCCGCCATCGCAGTGTAAGCCCTCCCTTCCCCCCCTTCTCCCTCAGCA
TCCCCATGACTCACTCCCACAAACCCAGCGTCGTCCACTTCCACATCTCGCACCTCTCCCTCCCCTTCCCGCCCC
CCCTAACCATGGCAACAACGATGCTCCCCCTGGCCGCCTTCCTGAACGCCTACGTCTACCCCAACCTCCTCCTCG
CATCCTCCACCAGCACGCACCGCCTCTCGCCCACCCGTCTGGCCCCGCTGGTGCTGCAGGCCACGCAGGCTCTCG
TCACGGCTGTGCTGGCAACGGCCTTGCTCCTACGCGGCCTGGTGCCTTCCTCTGCTGTTGTCGAGGCGTTGCTCG
AGGGCCGGTGGGCGGGGTTGTTCGAGAGGGGGGAGGGGGCAGGCTTGAACTCGTGCAGGATTCGTTGTCGTGTTG
TGGGTTTTGGGATGTCCATGATCGGGCTTTTCCTTTTGAGGGGGGGTGCGCTGAGGAGTATGGGAGGAGTTTGCC
TTGTAGGCAGCCGTGGGCCAAGGCTATGAAGGCCACCTCCGCGCTGGACCTTGCCGTTGTTCTCGCCGTGGGCTT
GATGCAGGTTCGTCTCCCTCTCCATCTCTCCCCACCACTTCTGCACCGGAAGCTAACCCGACCCTTCCCTCGCCT
AAGCTCCTCGGCCTGCTGCTCATGAGGGAGCGGACTGTCTGGTGGACAGCCCTCCGCACACAGGACTGGAAAGCC
GACGACGAGGGACGTCTGCTTGCTTCCGCGGTGGACGAGGATGGGAGGGGGGTTACAGTGCGGTGTCGCGGGGGG
AGGGGGCTGGTGCTGAGGGGAGGCGGGTTGTTGCGTGCTAGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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