© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|04973 |
| Gene name | |
| Location | scaffold_05:2124852..2126918 |
| Strand | - |
| Gene length (bp) | 2066 |
| Transcript length (bp) | 1902 |
| Coding sequence length (bp) | 1902 |
| Protein length (aa) | 634 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 1.1E-05 | 3 | 143 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005615 | extracellular space | Yes |
| GO:0090729 | toxin activity | Yes |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0110165 | cellular anatomical entity | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mitochondrion | 0.3439 | 0.2326 | 0.3991 | 0.2105 | 0.554 | 0.4206 | 0.4459 | 0.3042 | 0.3678 | 0.1422 |
| Orthofinder run ID | 4 |
| Orthogroup | 2 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|04973 MDPRTVRSQGGLRPQGVNWEQDEEAFSIDHHYISGPNGCEMDGSSGPSSSFRTAYVSVSRQLDTAAAFGNWMYEI RATPNMLDDRWPEPYPDGEVFALGGILWKQVRRYARILRFSDDSFNLTTWANNSDYDGRLYEDSHLAAKCHVSVK FPRALSWGEVGDAQAEWLRRPLFHTARSFVQDVAMDLVGTLPLKFGSYDVDYTIPGPSKEDASELEVTQKRVEHD LHRLGPGGEHSDVFIREGRESMRGLIKDGRMNEAGCATWLRPRGLMGKRAEEPQEQPKSDSCCKVAAAFRQKTRR AQQVREVFGLSLNEMRQLMAGEFDGLNCALLVARMKEKADPNRSPESKGVYIIDAPTEESNLRDCKWAQEMVTPK PIEAVFYAHHLWPAEAKLQGGFLPPDGTTAFSAYRTFGAAAKRAGAYPSKGTQGLAGVVYLVRATPNMLVTQMTV PMVVGGIVWKQVMGWVYVPHNYHPPKDDSMQEEPRKQVRYMELLNQLSQRDTTLFEHNPDYDSGLNNYTAHDEYV DFENKPVQLLRDFMDVNGGPIGWTGDFPLFKRPAHKPDAVPAVHKPSMLQRVRDILSGPWGSLLTWLTASAALVF PVLGEMVAADRILNAALQGGRVNLIHMLRYTMG* |
| Coding | >Ophcf2|04973 ATGGATCCCAGGACTGTCAGGAGCCAAGGCGGGTTGCGGCCTCAAGGCGTCAACTGGGAGCAAGACGAGGAGGCT TTCTCAATCGACCATCATTACATTTCTGGCCCGAATGGATGTGAAATGGATGGGTCTAGCGGTCCGTCATCCTCT TTTCGGACGGCATACGTATCTGTTAGCCGGCAGCTGGACACGGCCGCAGCCTTTGGCAATTGGATGTACGAGATT CGTGCCACACCAAATATGCTTGACGATCGTTGGCCCGAACCCTATCCGGATGGTGAGGTCTTTGCCTTGGGTGGC ATTCTCTGGAAACAAGTCAGGAGATATGCTCGTATCTTGCGCTTCAGTGACGACAGCTTCAACCTGACCACTTGG GCGAACAACTCGGACTACGATGGCCGGCTGTATGAAGATTCGCACCTTGCTGCCAAGTGCCACGTCAGCGTGAAA TTTCCGAGGGCTCTTTCTTGGGGCGAGGTGGGCGACGCACAGGCTGAGTGGCTGCGGCGTCCCCTGTTCCACACA GCGCGGAGCTTCGTGCAAGATGTGGCCATGGATCTCGTCGGTACTTTGCCCCTGAAATTCGGCAGTTATGATGTC GACTACACTATTCCCGGGCCATCTAAGGAAGACGCATCCGAGCTAGAAGTTACGCAAAAGCGCGTTGAGCATGAC CTGCACCGTCTCGGCCCTGGCGGCGAACACTCGGACGTCTTCATCCGCGAGGGTCGCGAATCTATGCGGGGGCTG ATAAAAGACGGGCGTATGAACGAGGCCGGCTGTGCTACGTGGTTAAGACCCCGCGGGTTGATGGGCAAGCGGGCT GAGGAACCCCAAGAGCAGCCAAAGAGCGACAGCTGCTGCAAGGTAGCGGCGGCGTTTAGGCAGAAAACACGGCGG GCGCAACAAGTGCGTGAAGTGTTTGGGCTGTCGTTGAACGAGATGAGACAGTTGATGGCGGGCGAATTCGACGGC CTCAACTGCGCCCTGCTGGTGGCCCGGATGAAGGAAAAGGCGGATCCCAACAGGAGCCCCGAGAGCAAGGGCGTG TACATCATCGATGCACCGACGGAAGAGAGCAACCTGAGGGACTGCAAATGGGCGCAAGAAATGGTGACGCCAAAG CCGATCGAAGCCGTCTTCTACGCCCATCACCTGTGGCCGGCCGAGGCCAAGCTCCAAGGCGGATTCCTACCCCCG GACGGCACCACGGCCTTTTCGGCCTACCGCACATTTGGAGCAGCAGCGAAACGGGCGGGAGCATATCCCAGCAAG GGAACGCAGGGCCTCGCAGGCGTCGTCTACCTGGTGCGGGCAACGCCCAACATGCTGGTGACCCAGATGACGGTG CCGATGGTGGTGGGAGGCATCGTCTGGAAGCAGGTCATGGGCTGGGTCTACGTGCCTCACAACTACCATCCGCCA AAGGACGACAGCATGCAGGAGGAGCCCAGGAAACAGGTACGCTACATGGAGCTGCTGAACCAGCTGTCGCAGCGT GACACGACGCTGTTTGAGCACAACCCGGACTACGACAGCGGCCTCAACAACTACACGGCGCACGACGAGTACGTG GACTTTGAAAACAAGCCGGTCCAGCTTCTCCGGGACTTTATGGACGTGAACGGAGGTCCGATAGGCTGGACCGGC GACTTCCCGCTCTTCAAACGGCCGGCCCACAAGCCCGATGCCGTACCGGCTGTGCACAAGCCGAGCATGCTGCAG CGAGTCCGCGATATTCTCAGCGGGCCATGGGGCAGCCTACTGACGTGGCTAACGGCATCGGCGGCCCTAGTATTC CCCGTGCTGGGCGAGATGGTGGCCGCGGACAGGATCCTCAACGCGGCACTCCAGGGCGGGAGGGTGAATCTCATC CACATGTTGAGGTACACAATGGGCTAA |
| Transcript | >Ophcf2|04973 ATGGATCCCAGGACTGTCAGGAGCCAAGGCGGGTTGCGGCCTCAAGGCGTCAACTGGGAGCAAGACGAGGAGGCT TTCTCAATCGACCATCATTACATTTCTGGCCCGAATGGATGTGAAATGGATGGGTCTAGCGGTCCGTCATCCTCT TTTCGGACGGCATACGTATCTGTTAGCCGGCAGCTGGACACGGCCGCAGCCTTTGGCAATTGGATGTACGAGATT CGTGCCACACCAAATATGCTTGACGATCGTTGGCCCGAACCCTATCCGGATGGTGAGGTCTTTGCCTTGGGTGGC ATTCTCTGGAAACAAGTCAGGAGATATGCTCGTATCTTGCGCTTCAGTGACGACAGCTTCAACCTGACCACTTGG GCGAACAACTCGGACTACGATGGCCGGCTGTATGAAGATTCGCACCTTGCTGCCAAGTGCCACGTCAGCGTGAAA TTTCCGAGGGCTCTTTCTTGGGGCGAGGTGGGCGACGCACAGGCTGAGTGGCTGCGGCGTCCCCTGTTCCACACA GCGCGGAGCTTCGTGCAAGATGTGGCCATGGATCTCGTCGGTACTTTGCCCCTGAAATTCGGCAGTTATGATGTC GACTACACTATTCCCGGGCCATCTAAGGAAGACGCATCCGAGCTAGAAGTTACGCAAAAGCGCGTTGAGCATGAC CTGCACCGTCTCGGCCCTGGCGGCGAACACTCGGACGTCTTCATCCGCGAGGGTCGCGAATCTATGCGGGGGCTG ATAAAAGACGGGCGTATGAACGAGGCCGGCTGTGCTACGTGGTTAAGACCCCGCGGGTTGATGGGCAAGCGGGCT GAGGAACCCCAAGAGCAGCCAAAGAGCGACAGCTGCTGCAAGGTAGCGGCGGCGTTTAGGCAGAAAACACGGCGG GCGCAACAAGTGCGTGAAGTGTTTGGGCTGTCGTTGAACGAGATGAGACAGTTGATGGCGGGCGAATTCGACGGC CTCAACTGCGCCCTGCTGGTGGCCCGGATGAAGGAAAAGGCGGATCCCAACAGGAGCCCCGAGAGCAAGGGCGTG TACATCATCGATGCACCGACGGAAGAGAGCAACCTGAGGGACTGCAAATGGGCGCAAGAAATGGTGACGCCAAAG CCGATCGAAGCCGTCTTCTACGCCCATCACCTGTGGCCGGCCGAGGCCAAGCTCCAAGGCGGATTCCTACCCCCG GACGGCACCACGGCCTTTTCGGCCTACCGCACATTTGGAGCAGCAGCGAAACGGGCGGGAGCATATCCCAGCAAG GGAACGCAGGGCCTCGCAGGCGTCGTCTACCTGGTGCGGGCAACGCCCAACATGCTGGTGACCCAGATGACGGTG CCGATGGTGGTGGGAGGCATCGTCTGGAAGCAGGTCATGGGCTGGGTCTACGTGCCTCACAACTACCATCCGCCA AAGGACGACAGCATGCAGGAGGAGCCCAGGAAACAGGTACGCTACATGGAGCTGCTGAACCAGCTGTCGCAGCGT GACACGACGCTGTTTGAGCACAACCCGGACTACGACAGCGGCCTCAACAACTACACGGCGCACGACGAGTACGTG GACTTTGAAAACAAGCCGGTCCAGCTTCTCCGGGACTTTATGGACGTGAACGGAGGTCCGATAGGCTGGACCGGC GACTTCCCGCTCTTCAAACGGCCGGCCCACAAGCCCGATGCCGTACCGGCTGTGCACAAGCCGAGCATGCTGCAG CGAGTCCGCGATATTCTCAGCGGGCCATGGGGCAGCCTACTGACGTGGCTAACGGCATCGGCGGCCCTAGTATTC CCCGTGCTGGGCGAGATGGTGGCCGCGGACAGGATCCTCAACGCGGCACTCCAGGGCGGGAGGGTGAATCTCATC CACATGTTGAGGTACACAATGGGCTAA |
| Gene | >Ophcf2|04973 ATGGATCCCAGGACTGTCAGGAGCCAAGGCGGGTTGCGGCCTCAAGGCGTCAACTGGGAGCAAGACGAGGAGGCT TTCTCAATCGACCATCATTACATTTCTGGCCCGAATGGATGTGAAATGGATGGGTCTAGCGGTCCGTCATCCTCT TTTCGGACGGCATACGTATCTGTTAGCCGGCAGCTGGACACGGCCGCAGCCTTTGGCAATTGGATGTACGAGATT CGTGCCACACCAAATATGCTTGACGATCGTTGGCCCGAACCCTATCCGGATGGTGAGGTCTTTGCCTTGGGTGGC ATTCTCTGGAAACAAGTCAGGAGATATGCTCGTATCTTGCGCTTCAGTGACGACAGCTTCAACCTGACCACTTGG GCGAACAACTCGGACTACGATGGCCGGCTGTATGAAGATTCGCACCTTGCTGCCAAGTGCCACGTCAGCGTGAAA TTTCCGAGGGCTCTTTCTTGGGGCGAGGTGGGCGACGCACAGGCTGAGTGGCTGCGGCGTCCCCTGTTCCACACA GCGCGGAGCTTCGTGCAAGATGTGGCCATGGATCTCGTCGGTACTTTGCCCCTGAAATTCGGCAGTTATGATGTC GACTACACTATTCCCGGGCCATCTAAGGAAGACGCATCCGAGCTAGAAGTTACGCAAAAGCGCGGTGAGTCGACG GAGAAGATTGCACGACATCTGACGGCTGGGCTGACGAGTTCGAAGTTGAGCATGACCTGCACCGTCTCGGCCCTG GCGGCGAACACTCGGACGTCTTCATCCGCGAGGGTCGCGAATCTATGCGGGGGCTGATAAAAGACGGGCGTATGA ACGAGGCCGGCTGTGCTACGTGGTTAAGACCCCGCGGGTTGATGGGCAAGCGGGCTGAGGAACCCCAAGGTCGGA TGTCCGTCACGACGATGAAGGTGGCGATGCTGACGACATTAGCAGAGCAGCCAAAGAGCGACAGCTGCTGCAAGG TAGCGGCGGCGTTTAGGCAGAAAACACGGCGGGCGCAACAAGTGCGTGAAGTGTTTGGGCTGTCGTTGAACGAGA TGAGACAGTTGATGGCGGGCGAATTCGACGGCCTCAACTGCGCCCTGCTGGTGGCCCGGATGAAGGAAAAGGCGG ATCCCAACAGGAGCCCCGAGAGCAAGGGCGTGTACATCATCGATGGTAAGCCCCGGCGGGGGGTGAGGCTTTGAT GGATGCTAACGGATCGCATCGACACAGCACCGACGGAAGAGAGCAACCTGAGGGACTGCAAATGGGCGCAAGAAA TGGTGACGCCAAAGCCGATCGAAGCCGTCTTCTACGCCCATCACCTGTGGCCGGCCGAGGCCAAGCTCCAAGGCG GATTCCTACCCCCGGACGGCACCACGGCCTTTTCGGCCTACCGCACATTTGGAGCAGCAGCGAAACGGGCGGGAG CATATCCCAGCAAGGGAACGCAGGGCCTCGCAGGCGTCGTCTACCTGGTGCGGGCAACGCCCAACATGCTGGTGA CCCAGATGACGGTGCCGATGGTGGTGGGAGGCATCGTCTGGAAGCAGGTCATGGGCTGGGTCTACGTGCCTCACA ACTACCATCCGCCAAAGGACGACAGCATGCAGGAGGAGCCCAGGAAACAGGTACGCTACATGGAGCTGCTGAACC AGCTGTCGCAGCGTGACACGACGCTGTTTGAGCACAACCCGGACTACGACAGCGGCCTCAACAACTACACGGCGC ACGACGAGTACGTGGACTTTGAAAACAAGCCGGTCCAGCTTCTCCGGGACTTTATGGACGTGAACGGAGGTCCGA TAGGCTGGACCGGCGACTTCCCGCTCTTCAAACGGCCGGCCCACAAGCCCGATGCCGTACCGGCTGTGCACAAGC CGAGCATGCTGCAGCGAGTCCGCGATATTCTCAGCGGGCCATGGGGCAGCCTACTGACGTGGCTAACGGCATCGG CGGCCCTAGTATTCCCCGTGCTGGGCGAGATGGTGGCCGCGGACAGGATCCTCAACGCGGCACTCCAGGGCGGGA GGGTGAATCTCATCCACATGTTGAGGTACACAATGGGCTAA |