Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04950
Gene name
Locationscaffold_05:2058647..2059264
Strand-
Gene length (bp)617
Transcript length (bp)474
Coding sequence length (bp)474
Protein length (aa) 158

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PFAM Domains

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 40 0.5

Transmembrane Domains

Domain # Start End Length
1 12 31 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04950
MSSNTTGTSTPIAIAVALSTTATIALVLTLLERKLLVLAPEKAKDNEARSSDAKNVTVSAQTSPRLLHRPFTPTA
AGIAMSSPGPPPDRALPPTPLRADHVVEAAGRSVPSPSPSPAPAPAPAPAPTPTRPEPVRRGIFSDYLQQEGALE
RLVGPCR*
Coding >Ophcf2|04950
ATGTCGTCCAACACCACCGGAACGTCCACCCCCATCGCCATAGCCGTCGCCCTGTCCACCACGGCGACGATAGCC
CTGGTCTTGACATTGCTGGAAAGGAAGCTCCTCGTTCTCGCGCCGGAAAAGGCCAAGGATAATGAAGCTCGCTCT
TCCGACGCGAAAAACGTCACCGTCTCGGCCCAGACTTCTCCCCGTCTCCTTCATCGGCCCTTTACACCCACCGCC
GCGGGAATAGCCATGTCTTCTCCCGGCCCTCCTCCCGATCGCGCTCTCCCTCCGACGCCTCTGCGCGCAGACCAC
GTCGTTGAAGCCGCGGGCCGCTCAGTCCCGTCTCCGTCTCCGTCTCCGGCCCCGGCTCCGGCTCCGGCCCCGGCT
CCTACCCCTACCCGTCCCGAGCCTGTCCGACGGGGCATCTTCAGTGACTACCTGCAGCAAGAGGGTGCGCTGGAA
CGACTGGTCGGCCCCTGCAGGTGA
Transcript >Ophcf2|04950
ATGTCGTCCAACACCACCGGAACGTCCACCCCCATCGCCATAGCCGTCGCCCTGTCCACCACGGCGACGATAGCC
CTGGTCTTGACATTGCTGGAAAGGAAGCTCCTCGTTCTCGCGCCGGAAAAGGCCAAGGATAATGAAGCTCGCTCT
TCCGACGCGAAAAACGTCACCGTCTCGGCCCAGACTTCTCCCCGTCTCCTTCATCGGCCCTTTACACCCACCGCC
GCGGGAATAGCCATGTCTTCTCCCGGCCCTCCTCCCGATCGCGCTCTCCCTCCGACGCCTCTGCGCGCAGACCAC
GTCGTTGAAGCCGCGGGCCGCTCAGTCCCGTCTCCGTCTCCGTCTCCGGCCCCGGCTCCGGCTCCGGCCCCGGCT
CCTACCCCTACCCGTCCCGAGCCTGTCCGACGGGGCATCTTCAGTGACTACCTGCAGCAAGAGGGTGCGCTGGAA
CGACTGGTCGGCCCCTGCAGGTGA
Gene >Ophcf2|04950
ATGTCGTCCAACACCACCGGAACGTCCACCCCCATCGCCATAGCCGTCGCCCTGTCCACCACGGCGACGATAGCC
CTGGTCTTGACATTGCTGGTATGGCACCTCCGTCGGAAACGCACCAAGCTAGACGACGACGACGACGACGACGAC
GACTTGGAATCCCCCACGCCCCTCGTCCCCCCAGGGCTTCCCTCCCAAACAACAGCACTCCATTGACACCCCCCC
CGCGCCTCCAGGAAAGGAAGCTCCTCGTTCTCGCGCCGGAAAAGGCCAAGGATAATGAAGCTCGCTCTTCCGACG
CGAAAAACGTCACCGTCTCGGCCCAGACTTCTCCCCGTCTCCTTCATCGGCCCTTTACACCCACCGCCGCGGGAA
TAGCCATGTCTTCTCCCGGCCCTCCTCCCGATCGCGCTCTCCCTCCGACGCCTCTGCGCGCAGACCACGTCGTTG
AAGCCGCGGGCCGCTCAGTCCCGTCTCCGTCTCCGTCTCCGGCCCCGGCTCCGGCTCCGGCCCCGGCTCCTACCC
CTACCCGTCCCGAGCCTGTCCGACGGGGCATCTTCAGTGACTACCTGCAGCAAGAGGGTGCGCTGGAACGACTGG
TCGGCCCCTGCAGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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