Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04916
Gene name
Locationscaffold_05:1953098..1953733
Strand+
Gene length (bp)635
Transcript length (bp)570
Coding sequence length (bp)570
Protein length (aa) 190

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10256 Erf4 Golgin subfamily A member 7/ERF4 family 2.1E-35 40 164

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear export signal 0.5775 0.7289 0.0296 0.0539 0.1879 0.0092 0.1445 0.2236 0.1694 0.1257

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup5828
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|567
Ophiocordyceps australis map64 (Brazil) OphauB2|177
Ophiocordyceps camponoti-floridani Ophcf2|04916 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|5777
Ophiocordyceps kimflemingae Ophio5|669

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04916
MGDDVLPDNGVEEWGPQHPCYPHLNPHVPPDSPEYTSTRIIRIRRDWLPHGDLAPTLSNLYPEILDPAGLSEHEF
RRVIDKLNLELVHVFNPFAFRNVVDGFLGVVTGWLWDDCGFTAVKKRLHRLERWIDAWNRDMEKTVAADEGVTPP
KMIPLRQTAYMTLDIQIADPEIAPAPSSIAAGESRSPLS*
Coding >Ophcf2|04916
ATGGGCGACGACGTGCTCCCAGACAACGGCGTGGAAGAATGGGGACCCCAGCATCCTTGCTACCCTCATCTAAAC
CCGCACGTCCCGCCCGATTCACCCGAGTACACTTCGACGCGCATCATCCGCATCCGCCGCGACTGGTTGCCACAC
GGCGACCTGGCACCCACGCTATCGAATCTATACCCGGAGATTCTGGACCCGGCTGGCTTATCGGAACACGAGTTT
CGTCGCGTCATTGACAAGCTCAATCTCGAGCTCGTTCACGTCTTTAACCCTTTTGCTTTTCGCAACGTTGTTGAT
GGTTTTCTCGGTGTCGTCACTGGCTGGTTGTGGGACGATTGCGGCTTCACAGCCGTCAAGAAACGTCTCCATCGT
CTTGAGCGTTGGATCGACGCCTGGAATCGCGATATGGAGAAGACGGTCGCTGCTGATGAGGGCGTCACACCCCCC
AAGATGATCCCCCTACGGCAGACGGCCTACATGACGCTCGACATCCAAATAGCAGACCCCGAAATCGCACCGGCA
CCCAGCAGCATCGCCGCCGGCGAATCGCGCTCACCCCTTTCGTGA
Transcript >Ophcf2|04916
ATGGGCGACGACGTGCTCCCAGACAACGGCGTGGAAGAATGGGGACCCCAGCATCCTTGCTACCCTCATCTAAAC
CCGCACGTCCCGCCCGATTCACCCGAGTACACTTCGACGCGCATCATCCGCATCCGCCGCGACTGGTTGCCACAC
GGCGACCTGGCACCCACGCTATCGAATCTATACCCGGAGATTCTGGACCCGGCTGGCTTATCGGAACACGAGTTT
CGTCGCGTCATTGACAAGCTCAATCTCGAGCTCGTTCACGTCTTTAACCCTTTTGCTTTTCGCAACGTTGTTGAT
GGTTTTCTCGGTGTCGTCACTGGCTGGTTGTGGGACGATTGCGGCTTCACAGCCGTCAAGAAACGTCTCCATCGT
CTTGAGCGTTGGATCGACGCCTGGAATCGCGATATGGAGAAGACGGTCGCTGCTGATGAGGGCGTCACACCCCCC
AAGATGATCCCCCTACGGCAGACGGCCTACATGACGCTCGACATCCAAATAGCAGACCCCGAAATCGCACCGGCA
CCCAGCAGCATCGCCGCCGGCGAATCGCGCTCACCCCTTTCGTGA
Gene >Ophcf2|04916
ATGGGCGACGACGTGCTCCCAGACAACGGCGTGGAAGAATGGGGACCCCAGCATCCTTGCTACCCTCATCTAAAC
CCGCACGTCCCGCCCGATTCACCCGAGTACACTTCGACGCGCATCATCCGCATCCGCCGCGACTGGTTGCCACAC
GGCGACCTGGCACCCACGCTATCGAATCTATACCCGGAGATTCTGGACCCGGCTGGCTTATCGGAACACGAGTTT
CGTCGCGTCATTGACAAGCTCAATCTCGAGCTCGTTCACGTCTTTAACCCTTTTGCTTTTCGCAACGTTGTTGAT
GGTTTTCTCGGTGTCGTCACTGGCTGGTTGTGGGACGATTGCGGCTTCACAGCCGTCAAGAAACGTCTCCATCGT
CTTGAGCGTTGGATCGACGCCTGGAATCGCGATATGGAGAAGACGGTCGCTGCTGATGAGGGCGTCACACCCCCC
AAGATGATCCCCCTACGGCAGACGGCCTACATGACGGTGAAGAAACCCATCACTTCGCTCTTCGCTCTACCTCGG
TTCAACAGACTGACTCTCCCACACAGCTCGACATCCAAATAGCAGACCCCGAAATCGCACCGGCACCCAGCAGCA
TCGCCGCCGGCGAATCGCGCTCACCCCTTTCGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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