Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04884
Gene name
Locationscaffold_05:1868073..1869211
Strand+
Gene length (bp)1138
Transcript length (bp)840
Coding sequence length (bp)840
Protein length (aa) 280

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.5

Transmembrane Domains

Domain # Start End Length
1 30 52 22
2 65 87 22
3 114 136 22
4 148 170 22
5 238 260 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04884
MEDATVLVPIMAPPPGVTSNFTDPVTNGLILTRLIPVFMAVVVFFAVLRVYTRAFVTRSLGFDDVLAVFSAALIV
ADLAVNFYLLHNVSSEGIFGVHLYDVPITRVTGSLMQSIMWLLLLYIVASMSIKLTILTLYHRLFPLVRHVTWMI
RIGFALIIASYAAFFIGVLVMCVPSIPRADSFHDRRLSPEAIGLLQCISKCSAIGKVLSVFNPVSDIYLMSIPLP
LIKDLRTSRGKKAGAFAIFLTGILACAVSIVGAVFRVSQGLDFGWEIIRTTMVL*
Coding >Ophcf2|04884
ATGGAAGACGCCACGGTACTCGTACCCATCATGGCGCCGCCCCCGGGCGTGACGTCCAACTTTACAGATCCGGTT
ACGAACGGTCTGATTCTGACGAGGTTGATACCGGTCTTTATGGCTGTTGTCGTCTTTTTCGCCGTCTTGAGAGTC
TACACTCGCGCGTTTGTGACTCGTTCTCTAGGCTTTGACGATGTTCTTGCCGTGTTCAGCGCGGCCTTGATTGTC
GCCGACTTGGCTGTCAACTTCTACCTGCTTCACAATGTATCAAGTGAAGGCATATTTGGCGTTCACCTCTACGAT
GTCCCCATCACCAGAGTCACAGGCTCTCTCATGCAGTCCATCATGTGGCTGCTCCTCCTCTACATAGTAGCCTCC
ATGAGCATCAAACTAACCATCCTAACCCTCTACCATCGACTCTTCCCGCTCGTCCGCCACGTCACCTGGATGATC
AGGATCGGATTCGCCCTCATAATAGCTTCCTACGCCGCTTTCTTCATCGGCGTTCTGGTCATGTGCGTGCCAAGC
ATACCACGAGCAGACAGCTTTCACGACAGACGGCTATCTCCGGAAGCCATCGGTCTCCTGCAATGCATCTCCAAA
TGCAGCGCCATCGGCAAGGTTCTCTCCGTCTTCAACCCCGTATCGGACATCTACCTCATGTCTATCCCTCTGCCA
CTGATCAAGGATCTGAGGACATCTCGCGGGAAGAAAGCCGGCGCCTTCGCCATCTTCCTCACCGGCATCCTAGCC
TGCGCCGTTTCCATCGTGGGCGCTGTTTTCCGCGTTTCCCAGGGCCTCGATTTTGGCTGGGAGATTATCCGAACT
ACCATGGTCTTGTAA
Transcript >Ophcf2|04884
ATGGAAGACGCCACGGTACTCGTACCCATCATGGCGCCGCCCCCGGGCGTGACGTCCAACTTTACAGATCCGGTT
ACGAACGGTCTGATTCTGACGAGGTTGATACCGGTCTTTATGGCTGTTGTCGTCTTTTTCGCCGTCTTGAGAGTC
TACACTCGCGCGTTTGTGACTCGTTCTCTAGGCTTTGACGATGTTCTTGCCGTGTTCAGCGCGGCCTTGATTGTC
GCCGACTTGGCTGTCAACTTCTACCTGCTTCACAATGTATCAAGTGAAGGCATATTTGGCGTTCACCTCTACGAT
GTCCCCATCACCAGAGTCACAGGCTCTCTCATGCAGTCCATCATGTGGCTGCTCCTCCTCTACATAGTAGCCTCC
ATGAGCATCAAACTAACCATCCTAACCCTCTACCATCGACTCTTCCCGCTCGTCCGCCACGTCACCTGGATGATC
AGGATCGGATTCGCCCTCATAATAGCTTCCTACGCCGCTTTCTTCATCGGCGTTCTGGTCATGTGCGTGCCAAGC
ATACCACGAGCAGACAGCTTTCACGACAGACGGCTATCTCCGGAAGCCATCGGTCTCCTGCAATGCATCTCCAAA
TGCAGCGCCATCGGCAAGGTTCTCTCCGTCTTCAACCCCGTATCGGACATCTACCTCATGTCTATCCCTCTGCCA
CTGATCAAGGATCTGAGGACATCTCGCGGGAAGAAAGCCGGCGCCTTCGCCATCTTCCTCACCGGCATCCTAGCC
TGCGCCGTTTCCATCGTGGGCGCTGTTTTCCGCGTTTCCCAGGGCCTCGATTTTGGCTGGGAGATTATCCGAACT
ACCATGGTCTTGTAA
Gene >Ophcf2|04884
ATGGAAGACGCCACGGTACTCGTACCCATCATGGCGCCGCCCCCGGGCGTGACGTCCAACTTTACAGATCCGGTT
ACGAACGGTCTGATTCTGACGAGGTTGATACCGGTCTTTATGGCTGTTGTCGTCTTTTTCGCCGTCTTGAGAGTC
TACACTCGCGCGTTTGTGACTCGTTCTCTAGGCTTTGACGATGGTAAGCTGCGTGGGAATGAAGATCAAGGATGC
CATCTGATTGCTCGTACATTTAGTTCTTGCCGTGTTCAGCGCGGTGAGTTCCACATCACATTGATGTCTGGCGAG
ACGTACACTCATGTTTCTTGTTGTAGGCCTTGATTGTCGCCGACTTGGCTGTCAACTTCTACCGTACGTTGCTGC
AACGATGAGATTTCCCACGACACCTTCGCTGGCTTTACTGACTAGCAACGACTGAAGTGCTTCACAATGTATCAA
GTGAAGGCATATTTGGCGTTCACCTCTACGATGTCCCCATCACCAGAGTCACAGGCTCTCTCATGCAGGTTCGCT
CCATCTCAACCCCCCATCTCAACCCCAAACATCAGATACAGCTGGCTCATCAACTCCAGTCCATCATGTGGCTGC
TCCTCCTCTACATAGTAGCCTCCATGAGCATCAAACTAACCATCCTAACCCTCTACCATCGACTCTTCCCGCTCG
TCCGCCACGTCACCTGGATGATCAGGATCGGATTCGCCCTCATAATAGCTTCCTACGCCGCTTTCTTCATCGGCG
TTCTGGTCATGTGCGTGCCAAGCATACCACGAGCAGACAGCTTTCACGACAGACGGCTATCTCCGGAAGCCATCG
GTCTCCTGCAATGCATCTCCAAATGCAGCGCCATCGGCAAGGTTCTCTCCGTCTTCAACCCCGTATCGGACATCT
ACCTCATGTCTATCCCTCTGCCACTGATCAAGGATCTGAGGACATCTCGCGGGAAGAAAGCCGGCGCCTTCGCCA
TCTTCCTCACCGGCATCCTGTACGTCTTTCTCACGTAGATTCGCTCACGTAACTGATAGAATCATCCAGAGCCTG
CGCCGTTTCCATCGTGGGCGCTGTTTTCCGCGTTTCCCAGGGCCTCGATTTTGGCTGGGAGATTATCCGAACTAC
CATGGTCTTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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