Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04873
Gene name
Locationscaffold_05:1832633..1834091
Strand+
Gene length (bp)1458
Transcript length (bp)843
Coding sequence length (bp)843
Protein length (aa) 281

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16123 HAGH_C Hydroxyacylglutathione hydrolase C-terminus 1.3E-22 202 279
PF00753 Lactamase_B Metallo-beta-lactamase superfamily 2.8E-11 37 97
PF00753 Lactamase_B Metallo-beta-lactamase superfamily 1.2E-04 133 201

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 29 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04873
MFRLLPRRPLSVPTTAFAAACRAMHIKAIPMWVGSSNNYAYLVVDDESKEAVIIDPANPPEVTPLLKEAIDNGGI
KLKAIVNTHHHWDHAGGNKKLLADLGSRPVEVVGGKDCEGVTRTPAHGETWRLGDVTVRSVHTPCHTQDSICYYM
EDRTGRAVFTGDTLFVGGCGKFFEGSADEMHEALNKRLANLPDDTVVYPGHEYTASNAKFAMSVQPSQAIDRLRQ
YAAKETVTTGKFTIGDEKKHNVFMRVDDPDIQMATGESDPVGVMGKLREMKNGFK*
Coding >Ophcf2|04873
ATGTTTCGGCTCCTCCCCCGCAGGCCGCTATCCGTCCCAACCACCGCTTTCGCTGCTGCCTGTCGCGCCATGCAT
ATCAAGGCGATACCCATGTGGGTGGGGAGCAGCAATAACTACGCCTACCTGGTGGTCGACGACGAGTCTAAAGAG
GCCGTCATCATCGATCCGGCGAATCCACCCGAGGTTACTCCGCTGTTGAAGGAAGCCATCGATAACGGCGGCATC
AAGCTGAAAGCCATCGTCAACACGCACCACCACTGGGACCACGCCGGCGGGAACAAGAAGCTGCTTGCCGACCTG
GGATCCCGACCGGTTGAGGTGGTGGGCGGTAAGGACTGTGAGGGCGTGACGAGGACGCCGGCTCATGGTGAGACG
TGGAGGCTGGGCGACGTTACTGTCCGGAGCGTGCACACGCCGTGCCACACGCAGGATAGTATCTGCTACTACATG
GAGGACCGGACGGGGAGGGCCGTCTTCACCGGCGACACGCTGTTTGTCGGCGGATGCGGCAAGTTCTTTGAAGGC
TCGGCGGACGAGATGCACGAGGCGCTCAACAAGCGGCTTGCCAACCTTCCGGACGACACCGTCGTATACCCGGGA
CACGAGTACACGGCTTCGAATGCAAAGTTTGCCATGTCGGTGCAGCCAAGTCAGGCTATCGACCGGCTCCGGCAG
TATGCGGCCAAGGAGACGGTGACGACGGGCAAGTTTACGATTGGCGATGAAAAGAAACACAACGTCTTTATGCGC
GTTGATGACCCGGATATCCAGATGGCCACTGGCGAGTCGGATCCCGTCGGCGTCATGGGGAAGCTGCGTGAGATG
AAGAATGGGTTTAAGTGA
Transcript >Ophcf2|04873
ATGTTTCGGCTCCTCCCCCGCAGGCCGCTATCCGTCCCAACCACCGCTTTCGCTGCTGCCTGTCGCGCCATGCAT
ATCAAGGCGATACCCATGTGGGTGGGGAGCAGCAATAACTACGCCTACCTGGTGGTCGACGACGAGTCTAAAGAG
GCCGTCATCATCGATCCGGCGAATCCACCCGAGGTTACTCCGCTGTTGAAGGAAGCCATCGATAACGGCGGCATC
AAGCTGAAAGCCATCGTCAACACGCACCACCACTGGGACCACGCCGGCGGGAACAAGAAGCTGCTTGCCGACCTG
GGATCCCGACCGGTTGAGGTGGTGGGCGGTAAGGACTGTGAGGGCGTGACGAGGACGCCGGCTCATGGTGAGACG
TGGAGGCTGGGCGACGTTACTGTCCGGAGCGTGCACACGCCGTGCCACACGCAGGATAGTATCTGCTACTACATG
GAGGACCGGACGGGGAGGGCCGTCTTCACCGGCGACACGCTGTTTGTCGGCGGATGCGGCAAGTTCTTTGAAGGC
TCGGCGGACGAGATGCACGAGGCGCTCAACAAGCGGCTTGCCAACCTTCCGGACGACACCGTCGTATACCCGGGA
CACGAGTACACGGCTTCGAATGCAAAGTTTGCCATGTCGGTGCAGCCAAGTCAGGCTATCGACCGGCTCCGGCAG
TATGCGGCCAAGGAGACGGTGACGACGGGCAAGTTTACGATTGGCGATGAAAAGAAACACAACGTCTTTATGCGC
GTTGATGACCCGGATATCCAGATGGCCACTGGCGAGTCGGATCCCGTCGGCGTCATGGGGAAGCTGCGTGAGATG
AAGAATGGGTTTAAGTGA
Gene >Ophcf2|04873
ATGTTTCGGCTCCTCCCCCGCAGGCCGCTATCCGTCCCAACCACCGCTGTGAGTGATCACTGATGATACGGAGAT
GAACCCGCGCCCGAGTTGGGCAGTTCGGCTGAAGCCACGGGCGCAACAAGTTCGCTGCTGCCTGTCGCGCCATGC
ATATCAAGGCGATACCCATGTGTGAGTTGCCTCGTCCATGTATGTACGATGCCATGTACGAAGTATTCTGACTCG
TCGTCGCAGGGGTGGGGAGCAGCAATAACTACGCCTACCTGGTGGTCGACGACGAGTCTAAAGAGGCCGTCATCA
TCGATCCGGCGAATCCACCCGAGTGCGTTCTTCCGTTGTTTGCGTCGTGCGGGACCGGGATCGGGTAGGAGGGGG
GGGGGGGGTAAAGGCTTACGGACCTGACAAGGGTTACTCCGCTGTTGAAGGAAGCCATCGATAACGGCGGCATCA
AGCTGAAAGCCATCGTCAACACGCACCAGTCAGTTTCTACCCGTCCGGGGGGGGGGGGGGGGAAGGGCGGGAGGC
ACAGCGACTGACACGGCAGCAGCCACTGGGACCACGCCGGCGGGAACAAGAAGCTGGTGAGAAACAAGTAACCCG
GTGGGGCAAAGGGGCTTCTTTATGCTTGCTTGCTGTGTGTGGGATGATGTTGCTGACGCAGGGAGGAGCTTGCCG
ACCTGGGATCCCGACCGGTTGAGGTGGTGGGCGGTAAGGACTGTGAGGGCGTGACGAGGACGCCGGCTCATGGTG
AGACGTGGAGGCTGGGCGACGTTACTGTCCGGAGCGTGCACACGCCGTGCCACACGCAGGATAGTATCTGCTACT
ACATGGAGGACCGGACGGGGAGGGCCGTCTTCACCGGCGACACGCTGTTTGTCGGCGGTGCGTTGTTCCCTCCGC
CCCGTGGATGGGAAGAAGAGTCGATCTGACAAGAGGTGGGGGGGGTGTTCAGGATGCGGCAAGTTCTTTGAAGGC
TCGGCGGACGAGATGCACGAGGCGCTCAACAAGCGGCTTGCCAACCTTCCGGACGACACCGTCGTATACGTGAGA
CGGACGCCCCCTTTTGAACGACCCAAGTTCGCTCTTTTGCTGACGGGTTGCCCGGGTGGACACCCGTTTTCAACA
GCCGGGACACGAGTACACGGCTTCGAATGCAAAGTTTGCCATGTCGGTGCAGCCAAGTCAGGCTATCGACCGGCT
CCGGCAGTATGCGGCCAAGGAGACGGTGACGACGGGCAAGTTTACGATTGGCGATGAAAAGGTTACCTACCACCT
CGTTTCCCTTGGGGCCGGAGAGCCCGAAGAGAGAGGTGTATGTAAGTTGGCTGACGTGAAACGATGCAGAAACAC
AACGTCTTTATGCGCGTTGATGACCCGGATATCCAGATGGCCACTGGCGAGTCGGATCCCGTCGGCGTCATGGGG
AAGCTGCGTGAGATGAAGAATGGGTTTAAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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