Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|04867
Gene name
Locationscaffold_05:1818147..1819011
Strand-
Gene length (bp)864
Transcript length (bp)720
Coding sequence length (bp)720
Protein length (aa) 240

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05241 EBP EXPERA (EXPanded EBP superfamily) 6.6E-20 112 222

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 132 154 22
3 164 186 22
4 199 221 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|04867
MDAPTAPPDLFDRTTLLSLLSTAGMALTAYLASRRFVPVSAPGPLRFLFAWHAGDALCHFLLEGSFLYHCFFSST
SSSSVAAASSFPTPYNFLGYTDGSRLVGPQAGGDNAFALLWMVYARADRRWAGADLGVVSLELLTVFVDGPLACY
VCYLIAKGDAAASFWMVVLATCELYGGFMTFCPEWLTGNINLDGSNFMYMWVYLVFFNMLWVVIPLYAMWWSFGD
ISHAFAARAAKKHI*
Coding >Ophcf2|04867
ATGGACGCCCCCACCGCACCCCCAGACCTCTTCGACCGCACGACGCTCCTCTCCCTGCTCAGCACGGCAGGCATG
GCGCTGACAGCCTACCTTGCCTCCCGGCGCTTCGTCCCCGTCTCTGCTCCGGGCCCGCTGCGGTTCCTATTCGCG
TGGCACGCCGGCGACGCGCTGTGTCATTTCCTGCTGGAGGGGAGCTTCCTATACCATTGCTTCTTCTCGTCGACG
TCTTCCTCGTCTGTCGCCGCGGCGTCGTCCTTCCCCACGCCGTATAACTTCCTCGGCTACACAGACGGCAGCAGG
CTCGTGGGCCCGCAGGCCGGGGGCGATAACGCGTTTGCGTTGCTGTGGATGGTGTATGCGCGGGCGGATAGGAGG
TGGGCTGGTGCTGATCTGGGCGTCGTTAGCTTGGAGCTTTTGACCGTCTTTGTCGATGGGCCGCTTGCGTGTTAC
GTCTGCTACCTCATTGCCAAGGGGGATGCTGCGGCCAGCTTCTGGATGGTGGTGCTGGCGACTTGTGAGCTCTAT
GGCGGCTTCATGACGTTTTGCCCGGAGTGGTTAACTGGAAACATCAATCTCGATGGGAGCAACTTCATGTACATG
TGGGTTTACTTGGTCTTCTTCAATATGCTTTGGGTGGTGATTCCTCTGTATGCTATGTGGTGGTCGTTCGGGGAT
ATTTCCCATGCGTTTGCGGCGAGGGCAGCCAAGAAACACATCTAG
Transcript >Ophcf2|04867
ATGGACGCCCCCACCGCACCCCCAGACCTCTTCGACCGCACGACGCTCCTCTCCCTGCTCAGCACGGCAGGCATG
GCGCTGACAGCCTACCTTGCCTCCCGGCGCTTCGTCCCCGTCTCTGCTCCGGGCCCGCTGCGGTTCCTATTCGCG
TGGCACGCCGGCGACGCGCTGTGTCATTTCCTGCTGGAGGGGAGCTTCCTATACCATTGCTTCTTCTCGTCGACG
TCTTCCTCGTCTGTCGCCGCGGCGTCGTCCTTCCCCACGCCGTATAACTTCCTCGGCTACACAGACGGCAGCAGG
CTCGTGGGCCCGCAGGCCGGGGGCGATAACGCGTTTGCGTTGCTGTGGATGGTGTATGCGCGGGCGGATAGGAGG
TGGGCTGGTGCTGATCTGGGCGTCGTTAGCTTGGAGCTTTTGACCGTCTTTGTCGATGGGCCGCTTGCGTGTTAC
GTCTGCTACCTCATTGCCAAGGGGGATGCTGCGGCCAGCTTCTGGATGGTGGTGCTGGCGACTTGTGAGCTCTAT
GGCGGCTTCATGACGTTTTGCCCGGAGTGGTTAACTGGAAACATCAATCTCGATGGGAGCAACTTCATGTACATG
TGGGTTTACTTGGTCTTCTTCAATATGCTTTGGGTGGTGATTCCTCTGTATGCTATGTGGTGGTCGTTCGGGGAT
ATTTCCCATGCGTTTGCGGCGAGGGCAGCCAAGAAACACATCTAG
Gene >Ophcf2|04867
ATGGACGCCCCCACCGCACCCCCAGACCTCTTCGACCGCACGACGCTCCTCTCCCTGCTCAGCACGGCAGGCATG
GCGCTGACAGCCTACCTTGCCTCCCGGCGCTTCGTCCCCGTCTCTGCTCCGGGCCCGCTGCGGTTCCTATTCGCG
TGGCACGCCGGCGACGCGCTGTGTCATTTCCTGCTGGAGGGGAGCTTCCTATACCATTGCTTCTTCTCGTCGACG
TCTTCCTCGTCTGTCGCCGCGGCGTCGTCCTTCCCCACGCCGTATAACTTCCTCGGCTACACAGACGGCAGCAGG
CTCGTGGGCCCGCAGGCCGGGGGCGATAACGCGTTTGCGTTGCTGTGGATGGTGTATGCGCGGGCGGATAGGAGG
TGGGCTGGTGCTGATCTGGTGCGTTCTCTTTTCCCCCCCACGCCTCCCTCGGGAGAATTGCTTGCGGGGCGCTGA
TGGGTGGTGCCTTCGAGGGCGGCGTGGGGAAATGTTAGGGCGTCGTTAGCTTGGAGCTTTTGACCGTCTTTGTCG
ATGGGCCGCTTGCGTGTTACGTCTGCTACCTCATTGCCAAGGGGGATGCTGCGGCCAGCTTCTGGATGGTGGTGC
TGGCGACTTGTGAGCTCTATGGCGGTATGTGGGCTGTCGTGGGGGTGCGCTGCGGGTTGCTGACTTGAGCTAGGC
TTCATGACGTTTTGCCCGGAGTGGTTAACTGGAAACATCAATCTCGATGGGAGCAACTTCATGTACATGTGGGTT
TACTTGGTCTTCTTCAATATGCTTTGGGTGGTGATTCCTCTGTATGCTATGTGGTGGTCGTTCGGGGATATTTCC
CATGCGTTTGCGGCGAGGGCAGCCAAGAAACACATCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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