Protein ID | Ophcf2|04853 |
Gene name | |
Location | scaffold_05:1785528..1787464 |
Strand | + |
Gene length (bp) | 1936 |
Transcript length (bp) | 1662 |
Coding sequence length (bp) | 1662 |
Protein length (aa) | 554 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 67 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 20 | 42 | 22 |
2 | 55 | 77 | 22 |
3 | 102 | 124 | 22 |
4 | 133 | 155 | 22 |
5 | 184 | 206 | 22 |
6 | 218 | 237 | 19 |
7 | 257 | 279 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|04853 MADLSDFVKQDVDLHQTRGPALIAVSVVFLVLAYISVGLRTYARAYMTRSFMLDDWFMLIALVTMTLQCSFVLAG VGRGLGKHNAALSVPDLVAALMWQSNAAAIYILNMMFVKLSIGFFLLRLSNLWAIYKWILWVSLAIVVGWSVGLF FWDIFQCIPVEKQWDFRIEKGHCASPEAIVDSVIALTVLTVSSDWLYALLPIPMVWNVKMTRQAKVTVVIILGLG IFASIATLVRLRYLNGLKQIDDLSYTGSDTLIWSIIEPGVAIFAASMATIRPLLRYCKIKGFTTQFTRTRTGDAS QVAKEKEPEDPGKKPAGQNAGAFNISEISLNSPGGVIVAGSDQQDSPGFVNNNVRRKELTPLEVGKQQAQQRKES VKKGFWAEYGIRDLSFESIDYEIEDDGEQIIMTRTSTHYGNLSLNNINSPTSAQLQPTQSRKLSHSKSDTFFIED HRRLSTWQHPPLSRGDADGDVDLEAQSPVKGKGRADDFVEEEEEQQQQQQQQQQRGDEERQGEEEEGGAEEEPEE QPEEQPEEELSDPEDDERIWDEVRRRWC* |
Coding | >Ophcf2|04853 ATGGCTGATCTGTCCGACTTCGTCAAACAAGATGTCGATCTCCACCAGACTCGGGGGCCCGCCTTGATAGCGGTT TCCGTCGTCTTTCTCGTCCTCGCATACATCTCCGTCGGGCTGCGCACTTACGCGAGAGCATACATGACGAGGAGC TTTATGCTCGACGATTGGTTCATGCTGATAGCCCTGGTGACAATGACGCTGCAATGTTCTTTCGTCCTCGCTGGC GTCGGCAGGGGGCTGGGCAAACACAATGCGGCACTCTCTGTCCCAGACCTGGTTGCGGCTCTCATGTGGCAATCC AACGCGGCCGCCATCTACATTCTCAACATGATGTTTGTCAAGCTCAGCATCGGCTTCTTCCTCCTTCGGCTCAGC AACTTGTGGGCCATCTACAAATGGATCCTCTGGGTCAGTCTCGCCATCGTCGTTGGCTGGAGTGTCGGTCTCTTT TTTTGGGACATCTTCCAATGCATCCCCGTTGAGAAGCAGTGGGACTTTCGCATCGAGAAAGGGCATTGCGCATCT CCCGAGGCAATCGTCGACTCCGTCATTGCTCTTACCGTCCTGACTGTCTCGTCTGATTGGCTCTACGCCCTCCTC CCCATTCCCATGGTCTGGAACGTCAAAATGACTCGTCAGGCCAAAGTGACTGTCGTCATCATCCTTGGTCTCGGC ATATTTGCAAGTATCGCGACACTCGTCCGGCTGAGATATCTGAATGGGTTGAAGCAGATAGACGACCTGAGTTAC ACAGGATCTGATACGCTCATCTGGTCCATCATCGAACCGGGCGTCGCCATCTTCGCAGCCAGCATGGCGACGATC CGACCCCTCTTGCGCTACTGCAAAATCAAAGGCTTCACCACTCAGTTCACCAGGACGCGCACGGGCGATGCGTCG CAAGTCGCCAAGGAGAAGGAGCCCGAAGACCCAGGCAAGAAGCCGGCCGGCCAGAACGCGGGAGCCTTTAACATC AGCGAGATATCGCTCAACAGCCCCGGAGGCGTCATCGTGGCCGGATCGGATCAACAAGACTCGCCCGGCTTCGTC AATAATAACGTCAGGAGGAAGGAATTGACGCCGCTCGAGGTGGGCAAGCAGCAGGCACAGCAGCGCAAGGAGTCG GTAAAGAAGGGCTTCTGGGCCGAGTACGGCATCAGAGACTTGTCGTTTGAGAGCATCGACTACGAGATTGAAGAC GACGGCGAGCAGATCATCATGACGAGGACGTCGACTCATTACGGCAACCTATCGCTCAACAACATCAACAGCCCC ACCAGCGCGCAGCTGCAGCCGACGCAGAGCAGGAAGCTCAGTCATTCCAAGAGCGATACCTTTTTCATCGAGGAT CACAGGCGGCTCTCGACGTGGCAGCATCCGCCCTTGTCGAGGGGTGACGCCGACGGGGACGTCGATTTGGAGGCG CAGAGCCCGGTCAAGGGGAAAGGAAGGGCGGATGACTTTGTGGAGGAGGAGGAGGAGCAGCAGCAGCAGCAGCAG CAGCAGCAGCAGCGAGGGGATGAGGAGCGGCAAGGGGAGGAAGAGGAGGGGGGCGCCGAAGAGGAGCCGGAAGAG CAGCCGGAAGAGCAGCCGGAAGAGGAGCTTTCGGATCCGGAAGACGATGAACGTATATGGGACGAGGTGAGGCGC AGATGGTGCTGA |
Transcript | >Ophcf2|04853 ATGGCTGATCTGTCCGACTTCGTCAAACAAGATGTCGATCTCCACCAGACTCGGGGGCCCGCCTTGATAGCGGTT TCCGTCGTCTTTCTCGTCCTCGCATACATCTCCGTCGGGCTGCGCACTTACGCGAGAGCATACATGACGAGGAGC TTTATGCTCGACGATTGGTTCATGCTGATAGCCCTGGTGACAATGACGCTGCAATGTTCTTTCGTCCTCGCTGGC GTCGGCAGGGGGCTGGGCAAACACAATGCGGCACTCTCTGTCCCAGACCTGGTTGCGGCTCTCATGTGGCAATCC AACGCGGCCGCCATCTACATTCTCAACATGATGTTTGTCAAGCTCAGCATCGGCTTCTTCCTCCTTCGGCTCAGC AACTTGTGGGCCATCTACAAATGGATCCTCTGGGTCAGTCTCGCCATCGTCGTTGGCTGGAGTGTCGGTCTCTTT TTTTGGGACATCTTCCAATGCATCCCCGTTGAGAAGCAGTGGGACTTTCGCATCGAGAAAGGGCATTGCGCATCT CCCGAGGCAATCGTCGACTCCGTCATTGCTCTTACCGTCCTGACTGTCTCGTCTGATTGGCTCTACGCCCTCCTC CCCATTCCCATGGTCTGGAACGTCAAAATGACTCGTCAGGCCAAAGTGACTGTCGTCATCATCCTTGGTCTCGGC ATATTTGCAAGTATCGCGACACTCGTCCGGCTGAGATATCTGAATGGGTTGAAGCAGATAGACGACCTGAGTTAC ACAGGATCTGATACGCTCATCTGGTCCATCATCGAACCGGGCGTCGCCATCTTCGCAGCCAGCATGGCGACGATC CGACCCCTCTTGCGCTACTGCAAAATCAAAGGCTTCACCACTCAGTTCACCAGGACGCGCACGGGCGATGCGTCG CAAGTCGCCAAGGAGAAGGAGCCCGAAGACCCAGGCAAGAAGCCGGCCGGCCAGAACGCGGGAGCCTTTAACATC AGCGAGATATCGCTCAACAGCCCCGGAGGCGTCATCGTGGCCGGATCGGATCAACAAGACTCGCCCGGCTTCGTC AATAATAACGTCAGGAGGAAGGAATTGACGCCGCTCGAGGTGGGCAAGCAGCAGGCACAGCAGCGCAAGGAGTCG GTAAAGAAGGGCTTCTGGGCCGAGTACGGCATCAGAGACTTGTCGTTTGAGAGCATCGACTACGAGATTGAAGAC GACGGCGAGCAGATCATCATGACGAGGACGTCGACTCATTACGGCAACCTATCGCTCAACAACATCAACAGCCCC ACCAGCGCGCAGCTGCAGCCGACGCAGAGCAGGAAGCTCAGTCATTCCAAGAGCGATACCTTTTTCATCGAGGAT CACAGGCGGCTCTCGACGTGGCAGCATCCGCCCTTGTCGAGGGGTGACGCCGACGGGGACGTCGATTTGGAGGCG CAGAGCCCGGTCAAGGGGAAAGGAAGGGCGGATGACTTTGTGGAGGAGGAGGAGGAGCAGCAGCAGCAGCAGCAG CAGCAGCAGCAGCGAGGGGATGAGGAGCGGCAAGGGGAGGAAGAGGAGGGGGGCGCCGAAGAGGAGCCGGAAGAG CAGCCGGAAGAGCAGCCGGAAGAGGAGCTTTCGGATCCGGAAGACGATGAACGTATATGGGACGAGGTGAGGCGC AGATGGTGCTGA |
Gene | >Ophcf2|04853 ATGGCTGATCTGTCCGACTTCGTCAAACAAGATGTCGATCTCCACCAGACTCGGGGGCCCGCCTTGATAGCGGTT TCCGTCGTCTTTCTCGTCCTCGCATACATCTCCGTCGGGCTGCGCACTTACGCGAGAGCATACATGACGAGGAGC TTTATGCTCGACGATTGGTTCATGCTGATAGCCCTGGTCAGAAGTCCCTCGCCCTTGGCCAGGACGACGAGAAAG ACTAACAAGTGCGTCGACAGGTGACAATGACGCTGCAATGTTCTTTCGTCCTCGCTGGCGTCGGCAGGGGGCTGG GCAAACACAATGCGGCACTCTCTGTCCCAGACCTGGTTGCGGCTCTCATGGTGCGTGATTCGTCGGCCTTGTTGC TCGCAGTCGTGGCTCACACCCGGGACAGTGGCAATCCAACGCGGCCGCCATCTACATTCTCAACATGATGTTTGT CAAGCTCAGCATCGGCTTCTTCCTCCTTCGGCTCAGCAACTTGTGGGCCATCTACAAATGGATCCTCTGGGTCAG TCTCGCCATCGTCGTTGGCTGGAGTGTCGGTCTCTTTTTTTGGGACATCTTCCAATGCATCCCCGTTGAGAAGCA GTGGGACTTTCGCATCGAGAAAGGGCATTGCGCATCTCCCGAGGCAATCGTCGACTCCGTCATTGCTCTTACCGT CCTGACTGTCTCGTCTGATTGGCTCTACGTGAGTTTCCTGGCGTTGTGGCAGGGTTATGGCAGCTGACGTCGTTG CTTTGAAGGCCCTCCTCCCCATTCCCATGGTCTGGAACGTCAAAATGACTCGTCAGGCCAAAGTGACTGTCGTCA TCATCCTTGGTCTCGGCATATTGTGCGTTTGTTCCTGCTTTGCGGCAGCTCGTGCTCCCCGGGCTGACTCGAAGC AGTGCAAGTATCGCGACACTCGTCCGGCTGAGATATCTGAATGGGTTGAAGCAGATAGACGACCTGAGTTGTGAG TAGAACGGTGGAATGGTGAGGCAGTCTCGTCTCCTAACACTGTATAGACACAGGATCTGATACGCTCATCTGGTC CATCATCGAACCGGGCGTCGCCATCTTCGCAGCCAGCATGGCGACGATCCGACCCCTCTTGCGCTACTGCAAAAT CAAAGGCTTCACCACTCAGTTCACCAGGACGCGCACGGGCGATGCGTCGCAAGTCGCCAAGGAGAAGGAGCCCGA AGACCCAGGCAAGAAGCCGGCCGGCCAGAACGCGGGAGCCTTTAACATCAGCGAGATATCGCTCAACAGCCCCGG AGGCGTCATCGTGGCCGGATCGGATCAACAAGACTCGCCCGGCTTCGTCAATAATAACGTCAGGAGGAAGGAATT GACGCCGCTCGAGGTGGGCAAGCAGCAGGCACAGCAGCGCAAGGAGTCGGTAAAGAAGGGCTTCTGGGCCGAGTA CGGCATCAGAGACTTGTCGTTTGAGAGCATCGACTACGAGATTGAAGACGACGGCGAGCAGATCATCATGACGAG GACGTCGACTCATTACGGCAACCTATCGCTCAACAACATCAACAGCCCCACCAGCGCGCAGCTGCAGCCGACGCA GAGCAGGAAGCTCAGTCATTCCAAGAGCGATACCTTTTTCATCGAGGATCACAGGCGGCTCTCGACGTGGCAGCA TCCGCCCTTGTCGAGGGGTGACGCCGACGGGGACGTCGATTTGGAGGCGCAGAGCCCGGTCAAGGGGAAAGGAAG GGCGGATGACTTTGTGGAGGAGGAGGAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGAGGGGATGAGGA GCGGCAAGGGGAGGAAGAGGAGGGGGGCGCCGAAGAGGAGCCGGAAGAGCAGCCGGAAGAGCAGCCGGAAGAGGA GCTTTCGGATCCGGAAGACGATGAACGTATATGGGACGAGGTGAGGCGCAGATGGTGCTGA |