© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|04851 |
| Gene name | |
| Location | scaffold_05:1778708..1781379 |
| Strand | + |
| Gene length (bp) | 2671 |
| Transcript length (bp) | 2298 |
| Coding sequence length (bp) | 2298 |
| Protein length (aa) | 766 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.3228 | 0.8903 | 0.1958 | 0.0588 | 0.1037 | 0.0036 | 0.0419 | 0.0274 | 0.0153 | 0.002 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 735 | 757 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 3726 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|04851 MHTGSLFFCHPSLSQEHGHPPSPRLLRRSPTLRKLCGRRRRSSQARSRRLESALTLSRLAGYGATPSGPFLGAIP PAQPSRVCPHTHTQAPQHKTRKSYSPSPPVACPDTHPAFDPISISPHLIVMASMSPIDTSAAAISGPSSNAGSVS PRQTATPKNVAFELMFSNSPQYRARLPMRVQIYPHDTTDSIVTTVKNFYGLYSGPSGSKGVSFEDDNGNTLIARY ENFANNMIVYVRVIEEPPPAFAPQPFQAASAVEPEPYFAADACPAQQPQQRLDNDILRPGSRASRRRSTSPSAAR RRRSVSASTSCKKGRSRSFKKRGSVAGGHGDACSDSINGYSSGDGAPSTVSAKNKEHLGNTDISVDNIVEGGRRK RAKFESSELPLFAPPQMPAATSNPSVSPARRVDHQRPSMPFVHPGQSPFTNPRPMQSPQSYGAGVVHAAMYATPV SQGHRSRGSMGYPSSGATGLGVLPTPDPTVGSCMSEEDKDVAIQLMRLGESSNISHGRTSASTMDDTFSGRADVA SSTGATSDGSDSERDGPAPRRQKLDASGGSRPIYETTESHFMPTTEGGDVSADEADVDDGANSSVGDGRVVPHAK PAAAKKQSSAKPKATTKLAKSKVARPPSSKAKKPPVVAPPAGPMSPTSLTHSRKQSVASIGLASQPGEDEQPDLS TKPRCQRCRKSKKGCDRQRPCGRCRDAGLSADQCISEDEGNGRKGRYGRHMGVPIKQEDAASMAAVPGLLPAAPI TAAVGAADKVKKRKR* |
| Coding | >Ophcf2|04851 ATGCACACGGGCAGCCTCTTCTTCTGCCATCCATCATTATCGCAAGAGCACGGCCACCCTCCGTCGCCTCGTCTG CTCCGTCGGTCGCCCACTCTCCGCAAACTCTGCGGTAGACGTCGTCGCTCGTCGCAAGCCCGGAGCCGACGGCTC GAGTCGGCGCTTACTCTCAGCAGGCTCGCCGGCTACGGAGCGACGCCGTCCGGGCCCTTCCTTGGGGCCATACCG CCTGCTCAGCCCTCTCGGGTCTGCCCACACACGCACACACAAGCACCGCAACACAAAACCCGCAAATCCTACTCC CCCTCTCCTCCCGTCGCCTGCCCCGACACACACCCAGCCTTTGATCCCATTTCCATCTCTCCTCATCTCATCGTC ATGGCCTCCATGTCGCCCATAGACACCTCGGCTGCCGCCATCTCGGGGCCTTCGTCCAACGCCGGCAGCGTCTCG CCGCGACAGACGGCCACGCCCAAGAACGTCGCATTCGAGTTGATGTTCTCCAACTCGCCGCAGTATCGCGCGCGT CTCCCCATGCGGGTCCAGATCTATCCTCATGATACCACCGACTCCATCGTCACTACCGTTAAGAATTTCTACGGC CTATACTCTGGTCCGTCCGGCTCAAAGGGCGTCAGCTTTGAGGACGATAACGGCAACACGCTCATCGCGCGCTAC GAGAACTTCGCCAACAACATGATCGTCTACGTCCGCGTAATAGAGGAGCCCCCCCCGGCCTTTGCGCCGCAACCG TTCCAAGCCGCGTCCGCCGTCGAGCCCGAACCCTACTTCGCCGCCGACGCCTGTCCGGCCCAACAGCCCCAGCAG CGCTTAGACAACGACATTCTCCGACCCGGCTCCCGGGCATCGCGACGTCGCAGTACCTCGCCCAGCGCCGCCCGC CGTCGCCGGAGCGTCTCGGCGAGCACCTCTTGCAAGAAGGGCCGCTCTCGGTCGTTCAAGAAGCGAGGGTCCGTG GCCGGCGGCCATGGTGACGCATGTAGCGACAGCATCAACGGTTACAGCAGCGGCGACGGCGCCCCCAGCACCGTC TCTGCCAAGAACAAGGAGCACCTGGGCAATACTGACATCAGCGTCGATAACATTGTCGAGGGAGGCCGGCGCAAG AGGGCCAAGTTTGAGAGCTCGGAGCTGCCTTTGTTTGCGCCGCCCCAGATGCCGGCGGCCACTTCCAACCCATCG GTGTCTCCGGCCCGCCGCGTCGATCACCAGCGGCCGTCGATGCCGTTTGTCCACCCGGGCCAGAGCCCCTTTACA AACCCGCGGCCCATGCAGTCGCCGCAGAGCTACGGCGCCGGCGTCGTCCACGCTGCCATGTACGCCACTCCCGTC AGCCAGGGTCACCGCTCGCGCGGCAGCATGGGCTACCCCAGCAGCGGCGCCACCGGCCTTGGCGTCCTGCCCACG CCGGATCCCACCGTCGGCAGCTGCATGTCGGAAGAGGACAAGGACGTCGCCATTCAGCTCATGAGGCTCGGTGAG TCGTCCAACATCTCGCACGGCCGCACCTCGGCCTCTACCATGGACGACACCTTCAGCGGCCGGGCCGACGTCGCT TCCTCAACCGGCGCCACCAGTGATGGAAGTGACAGCGAGCGCGATGGCCCCGCGCCTCGTCGCCAGAAGCTCGAC GCGTCCGGCGGTTCGCGGCCCATCTATGAGACGACCGAGTCGCACTTCATGCCTACGACGGAGGGAGGCGACGTC AGCGCTGACGAAGCCGATGTCGACGACGGCGCAAACAGCTCGGTAGGAGACGGCAGGGTAGTTCCCCACGCCAAG CCTGCCGCCGCCAAGAAGCAATCGTCGGCCAAGCCTAAGGCGACCACTAAGCTCGCCAAGTCCAAGGTCGCCCGA CCTCCCAGCTCCAAGGCCAAGAAGCCGCCGGTCGTGGCGCCGCCGGCCGGACCCATGTCGCCGACGTCCCTCACG CACTCGCGAAAGCAGTCGGTGGCCTCGATCGGGCTGGCGTCTCAACCCGGCGAGGACGAGCAGCCGGACCTTTCC ACCAAGCCCCGGTGCCAGCGATGCCGCAAGAGCAAAAAGGGTTGCGACCGCCAGCGCCCGTGCGGACGTTGCCGC GACGCGGGGCTCTCGGCCGATCAGTGCATCAGCGAGGACGAGGGCAACGGACGCAAGGGTCGATATGGTCGCCAC ATGGGCGTCCCCATCAAGCAAGAAGATGCCGCCTCGATGGCCGCCGTGCCCGGTCTGCTACCCGCCGCCCCCATC ACGGCCGCTGTGGGAGCTGCGGACAAGGTCAAGAAGCGCAAGCGGTAG |
| Transcript | >Ophcf2|04851 ATGCACACGGGCAGCCTCTTCTTCTGCCATCCATCATTATCGCAAGAGCACGGCCACCCTCCGTCGCCTCGTCTG CTCCGTCGGTCGCCCACTCTCCGCAAACTCTGCGGTAGACGTCGTCGCTCGTCGCAAGCCCGGAGCCGACGGCTC GAGTCGGCGCTTACTCTCAGCAGGCTCGCCGGCTACGGAGCGACGCCGTCCGGGCCCTTCCTTGGGGCCATACCG CCTGCTCAGCCCTCTCGGGTCTGCCCACACACGCACACACAAGCACCGCAACACAAAACCCGCAAATCCTACTCC CCCTCTCCTCCCGTCGCCTGCCCCGACACACACCCAGCCTTTGATCCCATTTCCATCTCTCCTCATCTCATCGTC ATGGCCTCCATGTCGCCCATAGACACCTCGGCTGCCGCCATCTCGGGGCCTTCGTCCAACGCCGGCAGCGTCTCG CCGCGACAGACGGCCACGCCCAAGAACGTCGCATTCGAGTTGATGTTCTCCAACTCGCCGCAGTATCGCGCGCGT CTCCCCATGCGGGTCCAGATCTATCCTCATGATACCACCGACTCCATCGTCACTACCGTTAAGAATTTCTACGGC CTATACTCTGGTCCGTCCGGCTCAAAGGGCGTCAGCTTTGAGGACGATAACGGCAACACGCTCATCGCGCGCTAC GAGAACTTCGCCAACAACATGATCGTCTACGTCCGCGTAATAGAGGAGCCCCCCCCGGCCTTTGCGCCGCAACCG TTCCAAGCCGCGTCCGCCGTCGAGCCCGAACCCTACTTCGCCGCCGACGCCTGTCCGGCCCAACAGCCCCAGCAG CGCTTAGACAACGACATTCTCCGACCCGGCTCCCGGGCATCGCGACGTCGCAGTACCTCGCCCAGCGCCGCCCGC CGTCGCCGGAGCGTCTCGGCGAGCACCTCTTGCAAGAAGGGCCGCTCTCGGTCGTTCAAGAAGCGAGGGTCCGTG GCCGGCGGCCATGGTGACGCATGTAGCGACAGCATCAACGGTTACAGCAGCGGCGACGGCGCCCCCAGCACCGTC TCTGCCAAGAACAAGGAGCACCTGGGCAATACTGACATCAGCGTCGATAACATTGTCGAGGGAGGCCGGCGCAAG AGGGCCAAGTTTGAGAGCTCGGAGCTGCCTTTGTTTGCGCCGCCCCAGATGCCGGCGGCCACTTCCAACCCATCG GTGTCTCCGGCCCGCCGCGTCGATCACCAGCGGCCGTCGATGCCGTTTGTCCACCCGGGCCAGAGCCCCTTTACA AACCCGCGGCCCATGCAGTCGCCGCAGAGCTACGGCGCCGGCGTCGTCCACGCTGCCATGTACGCCACTCCCGTC AGCCAGGGTCACCGCTCGCGCGGCAGCATGGGCTACCCCAGCAGCGGCGCCACCGGCCTTGGCGTCCTGCCCACG CCGGATCCCACCGTCGGCAGCTGCATGTCGGAAGAGGACAAGGACGTCGCCATTCAGCTCATGAGGCTCGGTGAG TCGTCCAACATCTCGCACGGCCGCACCTCGGCCTCTACCATGGACGACACCTTCAGCGGCCGGGCCGACGTCGCT TCCTCAACCGGCGCCACCAGTGATGGAAGTGACAGCGAGCGCGATGGCCCCGCGCCTCGTCGCCAGAAGCTCGAC GCGTCCGGCGGTTCGCGGCCCATCTATGAGACGACCGAGTCGCACTTCATGCCTACGACGGAGGGAGGCGACGTC AGCGCTGACGAAGCCGATGTCGACGACGGCGCAAACAGCTCGGTAGGAGACGGCAGGGTAGTTCCCCACGCCAAG CCTGCCGCCGCCAAGAAGCAATCGTCGGCCAAGCCTAAGGCGACCACTAAGCTCGCCAAGTCCAAGGTCGCCCGA CCTCCCAGCTCCAAGGCCAAGAAGCCGCCGGTCGTGGCGCCGCCGGCCGGACCCATGTCGCCGACGTCCCTCACG CACTCGCGAAAGCAGTCGGTGGCCTCGATCGGGCTGGCGTCTCAACCCGGCGAGGACGAGCAGCCGGACCTTTCC ACCAAGCCCCGGTGCCAGCGATGCCGCAAGAGCAAAAAGGGTTGCGACCGCCAGCGCCCGTGCGGACGTTGCCGC GACGCGGGGCTCTCGGCCGATCAGTGCATCAGCGAGGACGAGGGCAACGGACGCAAGGGTCGATATGGTCGCCAC ATGGGCGTCCCCATCAAGCAAGAAGATGCCGCCTCGATGGCCGCCGTGCCCGGTCTGCTACCCGCCGCCCCCATC ACGGCCGCTGTGGGAGCTGCGGACAAGGTCAAGAAGCGCAAGCGGTAG |
| Gene | >Ophcf2|04851 ATGCACACGGGCAGCCTCTTCTTCTGCCATCCATCATTATCGCAAGAGCACGGCCACCCTCCGTCGCCTCGTCTG CTGTAAGCCATCGCTCCTTTGTCTTGATCTTACCCTCGTCTTTCCCGTCTCCTGACTCTCACGGAAGCGAGCTGC TTCGTCGGTCGCCTTTCTCTCCTCTTCTCTCCCCCCCCCCCCCCCCCCCCAAATCATGGCCACCCCCCTCTCAAA GAGAGACTCTGGCTACGATTCGCCTCTCCCTCCTTCACCGAGCTGAATCGTTTGACTGATTGCATCGTCTGTTCT AGCCGTCGGTCGCCCACTCTCCGCAAACTCTGCGGTAGACGTCGTCGCTCGTCGCAAGCCCGGAGCCGACGGCTC GAGTCGGCGCTTACTGTCTGCGGCCGCCTTTCCCTCGCACCACCAAGCGTCTCGACAGCCTGTTCTGTTGACGAA TCGAAGTCAAGCTCAGCAGGCTCGCCGGCTACGGAGCGACGCCGTCCGGGCCCTTCCTTGGGGCCATACCGCCTG CTCAGCCCTCTCGGGTCTGCCCACACACGCACACACAAGCACCGCAACACAAAACCCGCAAATCCTACTCCCCCT CTCCTCCCGTCGCCTGCCCCGACACACACCCAGCCTTTGATCCCATTTCCATCTCTCCTCATCTCATCGTCATGG CCTCCATGTCGCCCATAGACACCTCGGCTGCCGCCATCTCGGGGCCTTCGTCCAACGCCGGCAGCGTCTCGCCGC GACAGACGGCCACGCCCAAGAACGTCGCATTCGAGTTGATGTTCTCCAACTCGCCGCAGTATCGCGCGCGTCTCC CCATGCGGGTCCAGATCTATCCTCATGATACCACCGACTCCATCGTCACTACCGTTAAGAATTTCTACGGCCTAT ACTCTGGTCCGTCCGGCTCAAAGGGCGTCAGCTTTGAGGACGATAACGGCAACACGCTCATCGCGCGCTACGAGA ACTTCGCCAACAACATGATCGTCTACGTCCGCGTAATAGAGGAGCCCCCCCCGGCCTTTGCGCCGCAACCGTTCC AAGCCGCGTCCGCCGTCGAGCCCGAACCCTACTTCGCCGCCGACGCCTGTCCGGCCCAACAGCCCCAGCAGCGCT TAGACAACGACATTCTCCGACCCGGCTCCCGGGCATCGCGACGTCGCAGTACCTCGCCCAGCGCCGCCCGCCGTC GCCGGAGCGTCTCGGCGAGCACCTCTTGCAAGAAGGGCCGCTCTCGGTCGTTCAAGAAGCGAGGGTCCGTGGCCG GCGGCCATGGTGACGCATGTAGCGACAGCATCAACGGTTACAGCAGCGGCGACGGCGCCCCCAGCACCGTCTCTG CCAAGAACAAGGAGCACCTGGGCAATACTGACATCAGCGTCGATAACATTGTCGAGGGAGGCCGGCGCAAGAGGG CCAAGTTTGAGAGCTCGGTAGGCATTTCCCGTCTCGCTCCCTTGTGCAGCACCGTCGTCCATGTCCTCTTCCGCA AACTGACGGTCCGCTCAAGGAGCTGCCTTTGTTTGCGCCGCCCCAGATGCCGGCGGCCACTTCCAACCCATCGGT GTCTCCGGCCCGCCGCGTCGATCACCAGCGGCCGTCGATGCCGTTTGTCCACCCGGGCCAGAGCCCCTTTACAAA CCCGCGGCCCATGCAGTCGCCGCAGAGCTACGGCGCCGGCGTCGTCCACGCTGCCATGTACGCCACTCCCGTCAG CCAGGGTCACCGCTCGCGCGGCAGCATGGGCTACCCCAGCAGCGGCGCCACCGGCCTTGGCGTCCTGCCCACGCC GGATCCCACCGTCGGCAGCTGCATGTCGGAAGAGGACAAGGACGTCGCCATTCAGCTCATGAGGCTCGGTGAGTC GTCCAACATCTCGCACGGCCGCACCTCGGCCTCTACCATGGACGACACCTTCAGCGGCCGGGCCGACGTCGCTTC CTCAACCGGCGCCACCAGTGATGGAAGTGACAGCGAGCGCGATGGCCCCGCGCCTCGTCGCCAGAAGCTCGACGC GTCCGGCGGTTCGCGGCCCATCTATGAGACGACCGAGTCGCACTTCATGCCTACGACGGAGGGAGGCGACGTCAG CGCTGACGAAGCCGATGTCGACGACGGCGCAAACAGCTCGGTAGGAGACGGCAGGGTAGTTCCCCACGCCAAGCC TGCCGCCGCCAAGAAGCAATCGTCGGCCAAGCCTAAGGCGACCACTAAGCTCGCCAAGTCCAAGGTCGCCCGACC TCCCAGCTCCAAGGCCAAGAAGCCGCCGGTCGTGGCGCCGCCGGCCGGACCCATGTCGCCGACGTCCCTCACGCA CTCGCGAAAGCAGTCGGTGGCCTCGATCGGGCTGGCGTCTCAACCCGGCGAGGACGAGCAGCCGGACCTTTCCAC CAAGCCCCGGTGCCAGCGATGCCGCAAGAGCAAAAAGGGTTGCGACCGCCAGCGCCCGTGCGGACGTTGCCGCGA CGCGGGGCTCTCGGCCGATCAGTGCATCAGCGAGGACGAGGGCAACGGACGCAAGGGTCGATATGGTCGCCACAT GGGCGTCCCCATCAAGCAAGAAGATGCCGCCTCGATGGCCGCCGTGCCCGGTCTGCTACCCGCCGCCCCCATCAC GGCCGCTGTGGGAGCTGCGGACAAGGTCAAGAAGCGCAAGCGGTAG |